RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 GSG1Q2KHT4 349 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 PLK5Q496M5 336 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 ARSIQ5FYB1 569 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 MIIPQ5JXC2 388 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 ABHD12Q8N2K0 398 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 STPG4Q8N801 248 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 C8orf31Q8N9H6 132 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 OR2T6Q8NHC8 308 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 MLST8Q9BVC4 326 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 PRDM14Q9GZV8 571 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 OCIAD1Q9NX40 245 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 TAAR3PQ9P1P4 343 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 AMMECR1Q9Y4X0 333 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 EDC4Q6P2E9 1401 aaKnown RBP4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 A0A1W2PPE3 182 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 UPK2O00526 184 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 LEPROTL1O95214 131 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 ASIPP42127 132 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 FMODQ06828 376 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 TMEM255AQ5JRV8 349 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 FKBP1CQ5VVH2 108 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 AMN1Q8IY45 258 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 MMD2Q8IY49 270 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 OR11H7Q8NGC8 314 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 SLC25A43Q8WUT9 341 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 DLX4Q92988 240 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 NABP1Q96AH0 204 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 B9D1Q9UPM9 204 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 N4BP2Q86UW6 1770 aaPredicted RBP4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 TRAV27A0A087WT01 109 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 A0A1W2PPI3 338 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 C7orf66A4D0T2 115 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 ARRDC5A6NEK1 342 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 C9orf118A6NHY6 69 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 H3BRM9 83 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 K7N7A8 449 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 RHODO00212 210 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 CD160O95971 181 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 VDAC1P21796 283 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 PSMB5P28074 263 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 LPAR6P43657 344 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 RUNX1Q01196 453 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 CFHR1Q03591 330 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 KLRD1Q13241 179 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 C1orf174Q8IYL3 243 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 OR2L13Q8N349 312 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 LINC00477Q96M19 166 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 RCHY1Q96PM5 261 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 EMC6Q9BV81 110 aa4.52□□□□□ -1.69
R3HDM1-204ENST00000410054 MYO10Q9HD67 2058 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 PEAK1Q9H792 1746 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 GOLGA4Q13439 2230 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 NCBP2LA6PVI3 153 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 FAM157AC9JC47 383 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 CLDN11O75508 207 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 PRSS1P07477 247 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 ZNF688P0C7X2 276 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 MPZP25189 248 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 IL3RAP26951 378 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 AQP1P29972 269 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 CDKN2BP42772 138 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 ZNF345Q14585 488 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 SAXO1Q8IYX7 474 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 KHSRPQ92945 711 aaKnown RBP eCLIP4.51□□□□□ -1.699e-7■■■■□ 25.1
R3HDM1-204ENST00000410054 FIZ1Q96SL8 496 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 TMEM243Q9BU79 118 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 RPP25Q9BUL9 199 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 APOBEC3GQ9HC16 384 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 FSCN3Q9NQT6 498 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 SDCBPO00560 298 aaPredicted RBP4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 ZG16O60844 167 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 CXCL2P19875 107 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 PFN2P35080 140 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 RPL15P61313 204 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 SLC38A11Q08AI6 406 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 C9orf57Q5W0N0 161 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 HEPN1Q6WQI6 88 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 BCDIN3DQ7Z5W3 292 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 TEX45Q8NA69 505 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 SPTSSBQ8NFR3 76 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 APOBEC3DQ96AK3 386 aaPredicted RBP4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 PRELID3AQ96N28 172 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 SAP30LQ9HAJ7 183 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 PELI2Q9HAT8 420 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 ITSN1Q15811 1721 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 MUC21A0A0G2JKD1 596 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 MUC21A0A140T8X8 626 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 H3BS24 57 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 WIPF1O43516 503 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 MMP23AO75900 390 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 DXOO77932 396 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 FOXG1P55316 489 aaPredicted RBP4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 NDUFV3P56181 108 aaKnown RBP4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 HERVK_113P63121 156 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 CD164Q04900 197 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 MUC21Q5SSG8 566 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 GFI1BQ5VTD9 330 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 METRNLQ641Q3 311 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 DRAM1Q8N682 238 aa4.51□□□□□ -1.69
R3HDM1-204ENST00000410054 TMEM174Q8WUU8 243 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms