RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 SCTP09683 121 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 CPEP16870 476 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 CHRNA7P36544 502 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 VEGFCP49767 419 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 HLA-DRB3P79483 266 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 MLLT11Q13015 90 aaPredicted RBP11.26□□□□□ -0.61
MCF2L-210ENST00000409954 RAB11BQ15907 218 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 C2orf76Q3KRA6 126 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 C19orf54Q5BKX5 351 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 PPP1R27Q86WC6 154 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 DCUN1D4Q92564 292 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 OR5B12Q96R08 314 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 PRR25Q96S07 402 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 CMSS1Q9BQ75 279 aaKnown RBP11.26□□□□□ -0.61
MCF2L-210ENST00000409954 CENPOQ9BU64 300 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 TOLLIPQ9H0E2 274 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 C12orf4Q9NQ89 552 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 U3KQK5 164 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 V9GY05 133 aa11.26□□□□□ -0.61
MCF2L-210ENST00000409954 FOXI3A8MTJ6 420 aaPredicted RBP11.25□□□□□ -0.61
MCF2L-210ENST00000409954 TRDCB7Z8K6 153 aa11.25□□□□□ -0.61
MCF2L-210ENST00000409954 EGR2P11161 476 aaPredicted RBP11.25□□□□□ -0.61
MCF2L-210ENST00000409954 SERPINB10P48595 397 aa11.25□□□□□ -0.61
MCF2L-210ENST00000409954 RPS16P62249 146 aaKnown RBP11.25□□□□□ -0.61
MCF2L-210ENST00000409954 GNB1P62873 340 aa11.25□□□□□ -0.61
MCF2L-210ENST00000409954 PSG5Q15238 335 aa11.25□□□□□ -0.61
MCF2L-210ENST00000409954 P2RY14Q15391 338 aa11.25□□□□□ -0.61
MCF2L-210ENST00000409954 ECSCRQ19T08 205 aa11.25□□□□□ -0.61
MCF2L-210ENST00000409954 ACTBL2Q562R1 376 aa11.25□□□□□ -0.61
MCF2L-210ENST00000409954 GLDNQ6ZMI3 551 aaPredicted RBP11.25□□□□□ -0.61
MCF2L-210ENST00000409954 PRSS48Q7RTY5 328 aa11.25□□□□□ -0.61
MCF2L-210ENST00000409954 FAM3DQ96BQ1 224 aa11.25□□□□□ -0.61
MCF2L-210ENST00000409954 FLYWCH2Q96CP2 140 aaKnown RBP11.25□□□□□ -0.61
MCF2L-210ENST00000409954 ARHGAP5-AS1Q96IT6 56 aa11.25□□□□□ -0.61
MCF2L-210ENST00000409954 MGLLQ99685 303 aa11.25□□□□□ -0.61
MCF2L-210ENST00000409954 PECRQ9BY49 303 aa11.25□□□□□ -0.61
MCF2L-210ENST00000409954 KCNK15Q9H427 330 aa11.25□□□□□ -0.61
MCF2L-210ENST00000409954 SLA2Q9H6Q3 261 aa11.25□□□□□ -0.61
MCF2L-210ENST00000409954 RAB22AQ9UL26 194 aa11.25□□□□□ -0.61
MCF2L-210ENST00000409954 GAB2Q9UQC2 676 aa11.25□□□□□ -0.61
MCF2L-210ENST00000409954 SMAD5-AS1Q9Y6J3 95 aa11.25□□□□□ -0.61
MCF2L-210ENST00000409954 DENRO43583 198 aaKnown RBP11.24□□□□□ -0.61
MCF2L-210ENST00000409954 SOX15O60248 233 aa11.24□□□□□ -0.61
MCF2L-210ENST00000409954 PROP1O75360 226 aa11.24□□□□□ -0.61
MCF2L-210ENST00000409954 SPDEFO95238 335 aa11.24□□□□□ -0.61
MCF2L-210ENST00000409954 HSPB1P04792 205 aaKnown RBP11.24□□□□□ -0.61
MCF2L-210ENST00000409954 TFAP2AP05549 437 aa11.24□□□□□ -0.61
MCF2L-210ENST00000409954 LGALS7P47929 136 aa11.24□□□□□ -0.61
MCF2L-210ENST00000409954 MRPS15P82914 257 aaKnown RBP11.24□□□□□ -0.61
MCF2L-210ENST00000409954 TAGLNQ01995 201 aaKnown RBP11.24□□□□□ -0.61
MCF2L-210ENST00000409954 ASPHD1Q5U4P2 390 aa11.24□□□□□ -0.61
MCF2L-210ENST00000409954 UNQ5815/PRO19632Q6UWF5 114 aa11.24□□□□□ -0.61
MCF2L-210ENST00000409954 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.24□□□□□ -0.61
MCF2L-210ENST00000409954 OR4A4PQ8NGN8 299 aa11.24□□□□□ -0.61
MCF2L-210ENST00000409954 ABHD5Q8WTS1 349 aa11.24□□□□□ -0.61
MCF2L-210ENST00000409954 DLX4Q92988 240 aaPredicted RBP11.24□□□□□ -0.61
MCF2L-210ENST00000409954 GFI1Q99684 422 aa11.24□□□□□ -0.61
MCF2L-210ENST00000409954 HDHD3Q9BSH5 251 aaPredicted RBP11.24□□□□□ -0.61
MCF2L-210ENST00000409954 CCDC90BQ9GZT6 254 aa11.24□□□□□ -0.61
MCF2L-210ENST00000409954 TPSG1Q9NRR2 321 aa11.24□□□□□ -0.61
MCF2L-210ENST00000409954 OR1A1Q9P1Q5 309 aa11.24□□□□□ -0.61
MCF2L-210ENST00000409954 METTL1Q9UBP6 276 aaKnown RBP11.24□□□□□ -0.61
MCF2L-210ENST00000409954 NKX1-2Q9UD57 310 aaPredicted RBP11.24□□□□□ -0.61
MCF2L-210ENST00000409954 FBXO7Q9Y3I1 522 aa11.24□□□□□ -0.61
MCF2L-210ENST00000409954 PDCD5O14737 125 aa11.23□□□□□ -0.61
MCF2L-210ENST00000409954 DIRAS3O95661 229 aa11.23□□□□□ -0.61
MCF2L-210ENST00000409954 LY86O95711 162 aa11.23□□□□□ -0.61
MCF2L-210ENST00000409954 APOA2P02652 100 aa11.23□□□□□ -0.61
MCF2L-210ENST00000409954 LGALS1P09382 135 aaKnown RBP11.23□□□□□ -0.61
MCF2L-210ENST00000409954 CRHBPP24387 322 aa11.23□□□□□ -0.61
MCF2L-210ENST00000409954 CALRP27797 417 aaKnown RBP11.23□□□□□ -0.61
MCF2L-210ENST00000409954 RPS25P62851 125 aaKnown RBP11.23□□□□□ -0.61
MCF2L-210ENST00000409954 PDPNQ86YL7 162 aa11.23□□□□□ -0.61
MCF2L-210ENST00000409954 RHOVQ96L33 236 aa11.23□□□□□ -0.61
MCF2L-210ENST00000409954 TMEM68Q96MH6 324 aa11.23□□□□□ -0.61
MCF2L-210ENST00000409954 PARP12Q9H0J9 701 aaKnown RBP11.23□□□□□ -0.61
MCF2L-210ENST00000409954 RDH8Q9NYR8 311 aa11.23□□□□□ -0.61
MCF2L-210ENST00000409954 A3GALT2U3KPV4 340 aa11.23□□□□□ -0.61
MCF2L-210ENST00000409954 LDLRAD4O15165 306 aa11.22□□□□□ -0.61
MCF2L-210ENST00000409954 SAP30O75446 220 aa11.22□□□□□ -0.61
MCF2L-210ENST00000409954 CD3GP09693 182 aa11.22□□□□□ -0.61
MCF2L-210ENST00000409954 AQP4P55087 323 aa11.22□□□□□ -0.61
MCF2L-210ENST00000409954 NDPQ00604 133 aa11.22□□□□□ -0.61
MCF2L-210ENST00000409954 FABP5Q01469 135 aa11.22□□□□□ -0.61
MCF2L-210ENST00000409954 PLAC9Q5JTB6 97 aa11.22□□□□□ -0.61
MCF2L-210ENST00000409954 ACSM6Q6P461 480 aa11.22□□□□□ -0.61
MCF2L-210ENST00000409954 ZNF383Q8NA42 475 aa11.22□□□□□ -0.61
MCF2L-210ENST00000409954 DRAXINQ8NBI3 349 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-210ENST00000409954 LFNGQ8NES3 379 aa11.22□□□□□ -0.61
MCF2L-210ENST00000409954 RAB3CQ96E17 227 aa11.22□□□□□ -0.61
MCF2L-210ENST00000409954 OR4C12Q96R67 309 aa11.22□□□□□ -0.61
MCF2L-210ENST00000409954 CLCC1Q96S66 551 aa11.22□□□□□ -0.61
MCF2L-210ENST00000409954 VCX3BQ9H321 246 aa11.22□□□□□ -0.61
MCF2L-210ENST00000409954 TRAV1-2A0A0B4J238 106 aa11.21□□□□□ -0.61
MCF2L-210ENST00000409954 IGKV1-6A0A0C4DH72 117 aa11.21□□□□□ -0.61
MCF2L-210ENST00000409954 A0A0G2JLM5 398 aa11.21□□□□□ -0.61
MCF2L-210ENST00000409954 ANKRD65E5RJM6 399 aa11.21□□□□□ -0.61
MCF2L-210ENST00000409954 H3BUA1 57 aa11.21□□□□□ -0.61
MCF2L-210ENST00000409954 IGKV1-16P04430 117 aa11.21□□□□□ -0.61
MCF2L-210ENST00000409954 OR8U9P0C7N5 309 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms