RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 ANXA10Q9UJ72 324 aa24.67■■□□□ 1.54
TRAF3IP1-203ENST00000409739 IGHG2P01859 326 aa24.66■■□□□ 1.54
TRAF3IP1-203ENST00000409739 EIF4EP06730 217 aaKnown RBP24.66■■□□□ 1.54
TRAF3IP1-203ENST00000409739 MMDQ15546 238 aa24.66■■□□□ 1.54
TRAF3IP1-203ENST00000409739 TMEM69Q5SWH9 247 aa24.66■■□□□ 1.54
TRAF3IP1-203ENST00000409739 CNIH2Q6PI25 160 aa24.66■■□□□ 1.54
TRAF3IP1-203ENST00000409739 GVQW1Q8N7I0 195 aa24.66■■□□□ 1.54
TRAF3IP1-203ENST00000409739 DRAXINQ8NBI3 349 aaPredicted RBP24.66■■□□□ 1.54
TRAF3IP1-203ENST00000409739 OR5AN1Q8NGI8 311 aa24.66■■□□□ 1.54
TRAF3IP1-203ENST00000409739 PLXNB1O43157 2135 aa24.65■■□□□ 1.54
TRAF3IP1-203ENST00000409739 CTXN2P0C2S0 81 aa24.65■■□□□ 1.54
TRAF3IP1-203ENST00000409739 CNTFRP26992 372 aa24.65■■□□□ 1.54
TRAF3IP1-203ENST00000409739 C2orf68Q2NKX9 166 aa24.65■■□□□ 1.54
TRAF3IP1-203ENST00000409739 SLC35E3Q7Z769 313 aa24.65■■□□□ 1.54
TRAF3IP1-203ENST00000409739 CENPVQ7Z7K6 275 aaPredicted RBP24.65■■□□□ 1.54
TRAF3IP1-203ENST00000409739 OR5AU1Q8NGC0 362 aa24.65■■□□□ 1.54
TRAF3IP1-203ENST00000409739 ACOT12Q8WYK0 555 aa24.65■■□□□ 1.54
TRAF3IP1-203ENST00000409739 C5orf30Q96GV9 206 aa24.65■■□□□ 1.54
TRAF3IP1-203ENST00000409739 RASL11BQ9BPW5 248 aa24.65■■□□□ 1.54
TRAF3IP1-203ENST00000409739 TSPAN15O95858 294 aa24.64■■□□□ 1.54
TRAF3IP1-203ENST00000409739 TAS2R20P59543 309 aa24.64■■□□□ 1.54
TRAF3IP1-203ENST00000409739 TREML4Q6UXN2 200 aa24.64■■□□□ 1.54
TRAF3IP1-203ENST00000409739 CLVS1Q8IUQ0 354 aaPredicted RBP24.64■■□□□ 1.54
TRAF3IP1-203ENST00000409739 BEST4Q8NFU0 473 aa24.64■■□□□ 1.54
TRAF3IP1-203ENST00000409739 SDHAF2Q9NX18 166 aa24.64■■□□□ 1.54
TRAF3IP1-203ENST00000409739 GAB2Q9UQC2 676 aa24.64■■□□□ 1.54
TRAF3IP1-203ENST00000409739 WASHC3Q9Y3C0 194 aa24.64■■□□□ 1.54
TRAF3IP1-203ENST00000409739 M0R1X1 148 aa24.63■■□□□ 1.53
TRAF3IP1-203ENST00000409739 LINC00205P59089 165 aa24.63■■□□□ 1.53
TRAF3IP1-203ENST00000409739 C10orf99Q6UWK7 81 aa24.63■■□□□ 1.53
TRAF3IP1-203ENST00000409739 HOGA1Q86XE5 327 aa24.63■■□□□ 1.53
TRAF3IP1-203ENST00000409739 ZNF383Q8NA42 475 aa24.63■■□□□ 1.53
TRAF3IP1-203ENST00000409739 CMTM3Q96MX0 182 aa24.63■■□□□ 1.53
TRAF3IP1-203ENST00000409739 NOL4LQ96MY1 436 aaPredicted RBP24.63■■□□□ 1.53
TRAF3IP1-203ENST00000409739 CITED2Q99967 270 aaPredicted RBP24.63■■□□□ 1.53
TRAF3IP1-203ENST00000409739 RBM7Q9Y580 266 aaKnown RBP24.63■■□□□ 1.53
TRAF3IP1-203ENST00000409739 APOA1P02647 267 aa24.62■■□□□ 1.53
TRAF3IP1-203ENST00000409739 NFYAP23511 347 aaPredicted RBP24.62■■□□□ 1.53
TRAF3IP1-203ENST00000409739 MC5RP33032 325 aa24.62■■□□□ 1.53
TRAF3IP1-203ENST00000409739 LINC01548A6NM66 108 aa24.61■■□□□ 1.53
TRAF3IP1-203ENST00000409739 H7C2Y5 167 aa24.61■■□□□ 1.53
TRAF3IP1-203ENST00000409739 NBR2O15453 112 aa24.61■■□□□ 1.53
TRAF3IP1-203ENST00000409739 RPL5P46777 297 aaKnown RBP24.61■■□□□ 1.53
TRAF3IP1-203ENST00000409739 NPBQ8NG41 125 aa24.61■■□□□ 1.53
TRAF3IP1-203ENST00000409739 HSPB9Q9BQS6 159 aa24.61■■□□□ 1.53
TRAF3IP1-203ENST00000409739 CMYA5Q8N3K9 4069 aa24.6■■□□□ 1.53
TRAF3IP1-203ENST00000409739 MEIS3P1A6NDR6 274 aa24.6■■□□□ 1.53
TRAF3IP1-203ENST00000409739 HPGDSO60760 199 aa24.6■■□□□ 1.53
TRAF3IP1-203ENST00000409739 NDUFA3O95167 84 aa24.6■■□□□ 1.53
TRAF3IP1-203ENST00000409739 CSF1P09603 554 aa24.6■■□□□ 1.53
TRAF3IP1-203ENST00000409739 ZNF182P17025 639 aaPredicted RBP24.6■■□□□ 1.53
TRAF3IP1-203ENST00000409739 CBX5P45973 191 aa24.6■■□□□ 1.53
TRAF3IP1-203ENST00000409739 ARPC4P59998 168 aa24.6■■□□□ 1.53
TRAF3IP1-203ENST00000409739 SPCS2Q15005 226 aa24.6■■□□□ 1.53
TRAF3IP1-203ENST00000409739 TCTEX1D4Q5JR98 221 aa24.6■■□□□ 1.53
TRAF3IP1-203ENST00000409739 FOXRED2Q8IWF2 684 aa24.6■■□□□ 1.53
TRAF3IP1-203ENST00000409739 RAB2BQ8WUD1 216 aa24.6■■□□□ 1.53
TRAF3IP1-203ENST00000409739 SNAPC3Q92966 411 aa24.6■■□□□ 1.53
TRAF3IP1-203ENST00000409739 LINC00527Q9UJ94 153 aa24.6■■□□□ 1.53
TRAF3IP1-203ENST00000409739 OR2W1Q9Y3N9 320 aa24.6■■□□□ 1.53
TRAF3IP1-203ENST00000409739 PSMB11A5LHX3 300 aa24.59■■□□□ 1.53
TRAF3IP1-203ENST00000409739 KCNAB3O43448 404 aa24.59■■□□□ 1.53
TRAF3IP1-203ENST00000409739 FCER2P06734 321 aa24.59■■□□□ 1.53
TRAF3IP1-203ENST00000409739 ELK1P19419 428 aa24.59■■□□□ 1.53
TRAF3IP1-203ENST00000409739 SOX6P35712 828 aa24.59■■□□□ 1.53
TRAF3IP1-203ENST00000409739 NDUFA11Q86Y39 141 aa24.59■■□□□ 1.53
TRAF3IP1-203ENST00000409739 CHPT1Q8WUD6 406 aa24.59■■□□□ 1.53
TRAF3IP1-203ENST00000409739 AP3S1Q92572 193 aa24.59■■□□□ 1.53
TRAF3IP1-203ENST00000409739 MMP27Q9H306 513 aa24.59■■□□□ 1.53
TRAF3IP1-203ENST00000409739 ADARB2-AS1A8MUL3 147 aa24.58■■□□□ 1.53
TRAF3IP1-203ENST00000409739 RBBP9O75884 186 aa24.58■■□□□ 1.53
TRAF3IP1-203ENST00000409739 APOA2P02652 100 aa24.58■■□□□ 1.53
TRAF3IP1-203ENST00000409739 CD83Q01151 205 aa24.58■■□□□ 1.53
TRAF3IP1-203ENST00000409739 C5orf64Q2M2E5 130 aa24.58■■□□□ 1.53
TRAF3IP1-203ENST00000409739 NSUN5P1Q3KNT7 163 aa24.58■■□□□ 1.53
TRAF3IP1-203ENST00000409739 MZT2AQ6P582 158 aa24.58■■□□□ 1.53
TRAF3IP1-203ENST00000409739 STPG2Q8N412 459 aa24.58■■□□□ 1.53
TRAF3IP1-203ENST00000409739 OR4X2Q8NGF9 303 aa24.58■■□□□ 1.53
TRAF3IP1-203ENST00000409739 IFT46Q9NQC8 304 aa24.58■■□□□ 1.53
TRAF3IP1-203ENST00000409739 KIAA1456Q9P272 454 aa24.58■■□□□ 1.53
TRAF3IP1-203ENST00000409739 J3QRK9 145 aa24.57■■□□□ 1.52
TRAF3IP1-203ENST00000409739 AP4M1O00189 453 aa24.57■■□□□ 1.52
TRAF3IP1-203ENST00000409739 TUSC2O75896 110 aa24.57■■□□□ 1.52
TRAF3IP1-203ENST00000409739 HLA-DQB1P01920 261 aa24.57■■□□□ 1.52
TRAF3IP1-203ENST00000409739 IGKV1-16P04430 117 aa24.57■■□□□ 1.52
TRAF3IP1-203ENST00000409739 ZNF329Q86UD4 541 aa24.57■■□□□ 1.52
TRAF3IP1-203ENST00000409739 PDPNQ86YL7 162 aa24.57■■□□□ 1.52
TRAF3IP1-203ENST00000409739 BCL7BQ9BQE9 202 aa24.57■■□□□ 1.52
TRAF3IP1-203ENST00000409739 ZNF107Q9UII5 783 aaPredicted RBP24.57■■□□□ 1.52
TRAF3IP1-203ENST00000409739 ANAPC10Q9UM13 185 aa24.57■■□□□ 1.52
TRAF3IP1-203ENST00000409739 IGKV1D-13A0A0B4J2D9 117 aa24.56■■□□□ 1.52
TRAF3IP1-203ENST00000409739 HLA-DRB1P01911 266 aa24.56■■□□□ 1.52
TRAF3IP1-203ENST00000409739 IGKV1-13P0DP09 117 aa24.56■■□□□ 1.52
TRAF3IP1-203ENST00000409739 LUMP51884 338 aaPredicted RBP24.56■■□□□ 1.52
TRAF3IP1-203ENST00000409739 TMBIM6P55061 237 aa24.56■■□□□ 1.52
TRAF3IP1-203ENST00000409739 ZNF645Q8N7E2 425 aa24.56■■□□□ 1.52
TRAF3IP1-203ENST00000409739 SLC35D1Q9NTN3 355 aa24.56■■□□□ 1.52
TRAF3IP1-203ENST00000409739 RNF5Q99942 180 aa24.55■■□□□ 1.52
TRAF3IP1-203ENST00000409739 NECAP2Q9NVZ3 263 aa24.55■■□□□ 1.52
TRAF3IP1-203ENST00000409739 SMIM31A0A1B0GVY4 71 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms