RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 ZNF816Q0VGE8 651 aaPredicted RBP12.4□□□□□ -0.42
AP1S3-204ENST00000409375 BAMBIQ13145 260 aa12.4□□□□□ -0.42
AP1S3-204ENST00000409375 FAM120AOSQ5T036 256 aa12.4□□□□□ -0.42
AP1S3-204ENST00000409375 UTF1Q5T230 341 aa12.4□□□□□ -0.42
AP1S3-204ENST00000409375 TPTE2P1Q5T6R2 138 aa12.4□□□□□ -0.42
AP1S3-204ENST00000409375 ZNF818PQ6ZRF7 136 aa12.4□□□□□ -0.42
AP1S3-204ENST00000409375 ZNF833PQ6ZTB9 187 aa12.4□□□□□ -0.42
AP1S3-204ENST00000409375 NRARPQ7Z6K4 114 aa12.4□□□□□ -0.42
AP1S3-204ENST00000409375 OR8H3Q8N146 312 aa12.4□□□□□ -0.42
AP1S3-204ENST00000409375 CENPSQ8N2Z9 138 aa12.4□□□□□ -0.42
AP1S3-204ENST00000409375 BVESQ8NE79 360 aa12.4□□□□□ -0.42
AP1S3-204ENST00000409375 DUSP18Q8NEJ0 188 aa12.4□□□□□ -0.42
AP1S3-204ENST00000409375 C20orf85Q9H1P6 137 aa12.4□□□□□ -0.42
AP1S3-204ENST00000409375 SDHAF2Q9NX18 166 aa12.4□□□□□ -0.42
AP1S3-204ENST00000409375 PRELID3BQ9Y3B1 194 aa12.4□□□□□ -0.42
AP1S3-204ENST00000409375 IGHV3OR16-10A0A075B7F0 116 aa12.39□□□□□ -0.43
AP1S3-204ENST00000409375 FSHBP01225 129 aa12.39□□□□□ -0.43
AP1S3-204ENST00000409375 IGHV4-38-2P0DP08 117 aa12.39□□□□□ -0.43
AP1S3-204ENST00000409375 THBS3P49746 956 aa12.39□□□□□ -0.43
AP1S3-204ENST00000409375 RND3P61587 244 aa12.39□□□□□ -0.43
AP1S3-204ENST00000409375 CBX3Q13185 183 aa12.39□□□□□ -0.43
AP1S3-204ENST00000409375 TRIM16LQ309B1 348 aa12.39□□□□□ -0.43
AP1S3-204ENST00000409375 KLF17Q5JT82 389 aaPredicted RBP12.39□□□□□ -0.43
AP1S3-204ENST00000409375 C1orf229Q6ZS94 237 aaPredicted RBP12.39□□□□□ -0.43
AP1S3-204ENST00000409375 ODF3L1Q8IXM7 274 aa12.39□□□□□ -0.43
AP1S3-204ENST00000409375 TCTEX1D1Q8N7M0 179 aa12.39□□□□□ -0.43
AP1S3-204ENST00000409375 MINDY2Q8NBR6 621 aa12.39□□□□□ -0.43
AP1S3-204ENST00000409375 ST6GALNAC6Q969X2 333 aa12.39□□□□□ -0.43
AP1S3-204ENST00000409375 OCEL1Q9H607 264 aa12.39□□□□□ -0.43
AP1S3-204ENST00000409375 SLC2A9Q9NRM0 540 aa12.39□□□□□ -0.43
AP1S3-204ENST00000409375 LIN7CQ9NUP9 197 aaKnown RBP12.39□□□□□ -0.43
AP1S3-204ENST00000409375 NUDT15Q9NV35 164 aa12.39□□□□□ -0.43
AP1S3-204ENST00000409375 CDC42EP3Q9UKI2 254 aa12.39□□□□□ -0.43
AP1S3-204ENST00000409375 VPS13CQ709C8 3753 aa12.39□□□□□ -0.43
AP1S3-204ENST00000409375 MAP1AP78559 2803 aaPredicted RBP12.38□□□□□ -0.43
AP1S3-204ENST00000409375 CSPG4Q6UVK1 2322 aa12.38□□□□□ -0.43
AP1S3-204ENST00000409375 LY6LH3BQJ8 138 aa12.38□□□□□ -0.43
AP1S3-204ENST00000409375 B3GALNT1O75752 331 aa12.38□□□□□ -0.43
AP1S3-204ENST00000409375 APOA2P02652 100 aa12.38□□□□□ -0.43
AP1S3-204ENST00000409375 H2AFB2P0C5Z0 115 aa12.38□□□□□ -0.43
AP1S3-204ENST00000409375 BRS3P32247 399 aa12.38□□□□□ -0.43
AP1S3-204ENST00000409375 KIR2DS2P43631 304 aa12.38□□□□□ -0.43
AP1S3-204ENST00000409375 PIGPP57054 158 aa12.38□□□□□ -0.43
AP1S3-204ENST00000409375 UBE2MP61081 183 aaKnown RBP12.38□□□□□ -0.43
AP1S3-204ENST00000409375 SSX2Q16385 188 aa12.38□□□□□ -0.43
AP1S3-204ENST00000409375 PHLDA2Q53GA4 152 aa12.38□□□□□ -0.43
AP1S3-204ENST00000409375 RPL39P5Q59GN2 51 aa12.38□□□□□ -0.43
AP1S3-204ENST00000409375 BRD3OSQ6XYD6 125 aa12.38□□□□□ -0.43
AP1S3-204ENST00000409375 KCTD9Q7L273 389 aa12.38□□□□□ -0.43
AP1S3-204ENST00000409375 TMED4Q7Z7H5 227 aa12.38□□□□□ -0.43
AP1S3-204ENST00000409375 LHFPL4Q7Z7J7 247 aa12.38□□□□□ -0.43
AP1S3-204ENST00000409375 SGPP2Q8IWX5 399 aa12.38□□□□□ -0.43
AP1S3-204ENST00000409375 RTN4IP1Q8WWV3 396 aaPredicted RBP12.38□□□□□ -0.43
AP1S3-204ENST00000409375 ZNRD1Q9P1U0 126 aa12.38□□□□□ -0.43
AP1S3-204ENST00000409375 VSIG4Q9Y279 399 aa12.38□□□□□ -0.43
AP1S3-204ENST00000409375 KCNIP3Q9Y2W7 256 aa12.38□□□□□ -0.43
AP1S3-204ENST00000409375 PIGBOS1A0A0B4J2F0 54 aa12.37□□□□□ -0.43
AP1S3-204ENST00000409375 TEX13DA0A0J9YY54 714 aaPredicted RBP12.37□□□□□ -0.43
AP1S3-204ENST00000409375 CYSRT1A8MQ03 144 aa12.37□□□□□ -0.43
AP1S3-204ENST00000409375 ARPC1BO15143 372 aaKnown RBP12.37□□□□□ -0.43
AP1S3-204ENST00000409375 RRASP10301 218 aa12.37□□□□□ -0.43
AP1S3-204ENST00000409375 ANXA3P12429 323 aa12.37□□□□□ -0.43
AP1S3-204ENST00000409375 SPNP16150 400 aa12.37□□□□□ -0.43
AP1S3-204ENST00000409375 MC5RP33032 325 aa12.37□□□□□ -0.43
AP1S3-204ENST00000409375 DUTP33316 252 aaKnown RBP12.37□□□□□ -0.43
AP1S3-204ENST00000409375 RAG2P55895 527 aa12.37□□□□□ -0.43
AP1S3-204ENST00000409375 TMEM128Q5BJH2 165 aa12.37□□□□□ -0.43
AP1S3-204ENST00000409375 RUSC1-AS1Q66K80 236 aa12.37□□□□□ -0.43
AP1S3-204ENST00000409375 C9orf139Q6ZV77 190 aa12.37□□□□□ -0.43
AP1S3-204ENST00000409375 LDLRAD3Q86YD5 345 aa12.37□□□□□ -0.43
AP1S3-204ENST00000409375 PIP4P2Q8N4L2 257 aa12.37□□□□□ -0.43
AP1S3-204ENST00000409375 CD300LFQ8TDQ1 290 aa12.37□□□□□ -0.43
AP1S3-204ENST00000409375 TCTEX1D2Q8WW35 142 aa12.37□□□□□ -0.43
AP1S3-204ENST00000409375 ZNF251Q9BRH9 671 aa12.37□□□□□ -0.43
AP1S3-204ENST00000409375 BEX2Q9BXY8 128 aa12.37□□□□□ -0.43
AP1S3-204ENST00000409375 C5orf66Q9H5L9 145 aa12.37□□□□□ -0.43
AP1S3-204ENST00000409375 HILPDAQ9Y5L2 63 aa12.37□□□□□ -0.43
AP1S3-204ENST00000409375 CSMD1Q96PZ7 3565 aa12.37□□□□□ -0.43
AP1S3-204ENST00000409375 SETXQ7Z333 2677 aaKnown RBP12.36□□□□□ -0.43
AP1S3-204ENST00000409375 IGHV1-3A0A0C4DH29 117 aa12.36□□□□□ -0.43
AP1S3-204ENST00000409375 TNFSF12O43508 249 aa12.36□□□□□ -0.43
AP1S3-204ENST00000409375 PEX14O75381 377 aa12.36□□□□□ -0.43
AP1S3-204ENST00000409375 DHFRP00374 187 aa12.36□□□□□ -0.43
AP1S3-204ENST00000409375 AKR1C4P17516 323 aa12.36□□□□□ -0.43
AP1S3-204ENST00000409375 PI3P19957 117 aa12.36□□□□□ -0.43
AP1S3-204ENST00000409375 REG1BP48304 166 aa12.36□□□□□ -0.43
AP1S3-204ENST00000409375 RAB13P51153 203 aa12.36□□□□□ -0.43
AP1S3-204ENST00000409375 MECP2P51608 486 aaKnown RBP12.36□□□□□ -0.43
AP1S3-204ENST00000409375 RTL8BQ17RB0 113 aa12.36□□□□□ -0.43
AP1S3-204ENST00000409375 MOB3BQ86TA1 216 aa12.36□□□□□ -0.43
AP1S3-204ENST00000409375 SMR3AQ99954 134 aa12.36□□□□□ -0.43
AP1S3-204ENST00000409375 RTBDNQ9BSG5 229 aaPredicted RBP12.36□□□□□ -0.43
AP1S3-204ENST00000409375 ALX4Q9H161 411 aaPredicted RBP12.36□□□□□ -0.43
AP1S3-204ENST00000409375 ACANP16112 2415 aa12.36□□□□□ -0.43
AP1S3-204ENST00000409375 TRAV6A0A075B6T7 132 aa12.35□□□□□ -0.43
AP1S3-204ENST00000409375 MPPED1O15442 326 aa12.35□□□□□ -0.43
AP1S3-204ENST00000409375 PRAF2O60831 178 aa12.35□□□□□ -0.43
AP1S3-204ENST00000409375 PGLYRP1O75594 196 aaPredicted RBP12.35□□□□□ -0.43
AP1S3-204ENST00000409375 IGLV2-14P01704 120 aa12.35□□□□□ -0.43
AP1S3-204ENST00000409375 F2RP25116 425 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms