RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 UTF1Q5T230 341 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 Q8TCH9 128 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 KLF14Q8TD94 323 aaPredicted RBP8.23□□□□□ -1.09
MSH2-202ENST00000406134 SDF2L1Q9HCN8 221 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 INTS1Q8N201 2190 aaKnown RBP8.23□□□□□ -1.09
MSH2-202ENST00000406134 TRGV5A0A0B4J1U4 118 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 ODAMA1E959 279 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 CXorf65A6NEN9 183 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 C17orf98A8MV24 154 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 CNOT4O95628 575 aaKnown RBP8.23□□□□□ -1.09
MSH2-202ENST00000406134 PTBP3O95758 552 aaKnown RBP8.23□□□□□ -1.09
MSH2-202ENST00000406134 SOD3P08294 240 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 RAB2AP61019 212 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 TBC1D28Q2M2D7 210 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 VWC2Q2TAL6 325 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 ZDHHC16Q969W1 377 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 AGMATQ9BSE5 352 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 LIN7CQ9NUP9 197 aaKnown RBP8.23□□□□□ -1.09
MSH2-202ENST00000406134 DOK5Q9P104 306 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 TRAPPC2LQ9UL33 140 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 PCNX2A6NKB5 2137 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 ADGRG4Q8IZF6 3080 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 S1PR2O95136 353 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 COX5AP20674 150 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 G6PCP35575 357 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 EIF2S3P41091 472 aaKnown RBP8.23□□□□□ -1.09
MSH2-202ENST00000406134 CD200P41217 278 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 CEBPGP53567 150 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 CXorf67Q86X51 503 aaPredicted RBP8.23□□□□□ -1.09
MSH2-202ENST00000406134 DMRTC2Q8IXT2 367 aaPredicted RBP8.23□□□□□ -1.09
MSH2-202ENST00000406134 GCNT2Q8N0V5 402 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 GATAD1Q8WUU5 269 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 TAF15Q92804 592 aaKnown RBP eCLIP8.23□□□□□ -1.09
MSH2-202ENST00000406134 URGCP-MRPS24S4R325 110 aa8.23□□□□□ -1.09
MSH2-202ENST00000406134 KLRC4-KLRK1H3BQV0 150 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 C15orf65H3BRN8 121 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 TNFSF15O95150 251 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 DEFA4P12838 97 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 RAC2P15153 192 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 WT1P19544 449 aaPredicted RBP8.22□□□□□ -1.09
MSH2-202ENST00000406134 IDH3GP51553 393 aaPredicted RBP8.22□□□□□ -1.09
MSH2-202ENST00000406134 TMEM41BQ5BJD5 291 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 HES3Q5TGS1 186 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 ZNF787Q6DD87 383 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 LCN15Q6UWW0 184 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 WDR82Q6UXN9 313 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 C1orf229Q6ZS94 237 aaPredicted RBP8.22□□□□□ -1.09
MSH2-202ENST00000406134 Q8IYB0 196 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 GMPPAQ96IJ6 420 aaPredicted RBP8.22□□□□□ -1.09
MSH2-202ENST00000406134 GGACTQ9BVM4 153 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 OR51M1Q9H341 326 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 SIRT7Q9NRC8 400 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 CSMD1Q96PZ7 3565 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 IGHG3P01860 377 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 TNFSF10P50591 281 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 TFF3Q07654 80 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 AESQ08117 197 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 SPRNQ5BIV9 151 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 LURAP1Q96LR2 239 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 OR2D2Q9H210 308 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 TMPRSS5Q9H3S3 457 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 TMEM242Q9NWH2 141 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 CBY1Q9Y3M2 126 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 TPRP12270 2363 aaKnown RBP8.22□□□□□ -1.09
MSH2-202ENST00000406134 UBE2L5PA0A1B0GUS4 154 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 ZFP92A6NM28 416 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 AGFG2O95081 481 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 HBE1P02100 147 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 TRGC2P03986 189 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 COL8A2P25067 703 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 SSTR5P35346 364 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 KIR2DL2P43627 348 aaPredicted RBP8.22□□□□□ -1.09
MSH2-202ENST00000406134 CDX1P47902 265 aaPredicted RBP8.22□□□□□ -1.09
MSH2-202ENST00000406134 SOX8P57073 446 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 VWA1Q6PCB0 445 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 ACP7Q6ZNF0 438 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 CLN8Q9UBY8 286 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 RNF150Q9ULK6 438 aa8.22□□□□□ -1.09
MSH2-202ENST00000406134 LRRC30A6NM36 301 aa8.21□□□□□ -1.09
MSH2-202ENST00000406134 FAM90A26D6RGX4 464 aa8.21□□□□□ -1.09
MSH2-202ENST00000406134 NXPH2O95156 264 aa8.21□□□□□ -1.09
MSH2-202ENST00000406134 HBZP02008 142 aa8.21□□□□□ -1.09
MSH2-202ENST00000406134 GRPP07492 148 aa8.21□□□□□ -1.09
MSH2-202ENST00000406134 RPS10P46783 165 aaKnown RBP8.21□□□□□ -1.09
MSH2-202ENST00000406134 SERF2P84101 59 aa8.21□□□□□ -1.09
MSH2-202ENST00000406134 SPANXN5Q5MJ07 72 aa8.21□□□□□ -1.09
MSH2-202ENST00000406134 SLC35E4Q6ICL7 350 aa8.21□□□□□ -1.09
MSH2-202ENST00000406134 NIPSNAP3BQ9BS92 247 aa8.21□□□□□ -1.09
MSH2-202ENST00000406134 ABI3Q9P2A4 366 aa8.21□□□□□ -1.09
MSH2-202ENST00000406134 KCNS2Q9ULS6 477 aa8.21□□□□□ -1.09
MSH2-202ENST00000406134 POLDIP2Q9Y2S7 368 aa8.21□□□□□ -1.09
MSH2-202ENST00000406134 DCHS2Q6V1P9 2916 aa8.21□□□□□ -1.09
MSH2-202ENST00000406134 RPP30P78346 268 aaKnown RBP8.21□□□□□ -1.1
MSH2-202ENST00000406134 AARDQ4LEZ3 155 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 OR2B11Q5JQS5 317 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 PRAMEF6Q5VXH4 476 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 BTNL3Q6UXE8 466 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 FAM90A1Q86YD7 464 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 HIST3H2BBQ8N257 126 aa8.21□□□□□ -1.1
MSH2-202ENST00000406134 CD177Q8N6Q3 437 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms