RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 RPP25LQ8N5L8 163 aaKnown RBP16.71■□□□□ 0.27
CCDC47-202ENST00000403162 OR1K1Q8NGR3 316 aa16.71■□□□□ 0.27
CCDC47-202ENST00000403162 OR4X1Q8NH49 305 aa16.71■□□□□ 0.27
CCDC47-202ENST00000403162 RBM7Q9Y580 266 aaKnown RBP16.71■□□□□ 0.27
CCDC47-202ENST00000403162 CEP295Q9C0D2 2601 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 SMCO3A2RU48 225 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 C3orf80F5H4A9 247 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 TMEM250H0YL14 139 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 LY86O95711 162 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 CELA3AP09093 270 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 ZNF16P17020 682 aaPredicted RBP16.7■□□□□ 0.26
CCDC47-202ENST00000403162 ADIRFQ15847 76 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 BEND4Q6ZU67 534 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 DRAM1Q8N682 238 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 B4GALT7Q9UBV7 327 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 PRSS50Q9UI38 385 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 SSUH2Q9Y2M2 353 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 APC2O95996 2303 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 TRAV39A0A0B4J263 110 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 A0A1W2PR80 420 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 RNF212BA8MTL3 300 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 IGKV1D-33P01593 117 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 IGKV1-33P01594 117 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 CA6P23280 308 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 ARG2P78540 354 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 C16orf82Q7Z2V1 217 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 TGIF2LYQ8IUE0 185 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 FGFRL1Q8N441 504 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 MBNL3Q9NUK0 354 aaKnown RBP16.7■□□□□ 0.26
CCDC47-202ENST00000403162 TRAPPC2LQ9UL33 140 aa16.7■□□□□ 0.26
CCDC47-202ENST00000403162 FRYQ5TBA9 3013 aa16.69■□□□□ 0.26
CCDC47-202ENST00000403162 ZFHX4Q86UP3 3567 aa16.69■□□□□ 0.26
CCDC47-202ENST00000403162 TSTD3H0UI37 97 aa16.69■□□□□ 0.26
CCDC47-202ENST00000403162 WDR1O75083 606 aa16.69■□□□□ 0.26
CCDC47-202ENST00000403162 TNFRSF9Q07011 255 aa16.69■□□□□ 0.26
CCDC47-202ENST00000403162 PRR18Q8N4B5 295 aa16.69■□□□□ 0.26
CCDC47-202ENST00000403162 RNASEH2CQ8TDP1 164 aaKnown RBP16.69■□□□□ 0.26
CCDC47-202ENST00000403162 OR2H2O95918 312 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 IL2RGP31785 369 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 BSXQ3C1V8 233 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 REC114Q7Z4M0 266 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 Q8IYB0 196 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 RHOVQ96L33 236 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 HES7Q9BYE0 225 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 HSPB7Q9UBY9 170 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 RAXQ9Y2V3 346 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 WIPI2Q9Y4P8 454 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 DVL1O14640 695 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 CD55P08174 381 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 PAX1P15863 534 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 DDTP30046 118 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 PSMB3P49720 205 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 ERVK11-1P61568 191 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 ATP6V1FQ16864 119 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 COA6Q5JTJ3 125 aaKnown RBP16.68■□□□□ 0.26
CCDC47-202ENST00000403162 FAM180AQ6UWF9 173 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.68■□□□□ 0.26
CCDC47-202ENST00000403162 UFSP2Q9NUQ7 469 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 CFAP47Q6ZTR5 3102 aa16.68■□□□□ 0.26
CCDC47-202ENST00000403162 CTXND1A0A1B0GTU2 59 aa16.67■□□□□ 0.26
CCDC47-202ENST00000403162 SIRPB1O00241 398 aa16.67■□□□□ 0.26
CCDC47-202ENST00000403162 CLDN1O95832 211 aa16.67■□□□□ 0.26
CCDC47-202ENST00000403162 CEACAM6P40199 344 aa16.67■□□□□ 0.26
CCDC47-202ENST00000403162 RPL23P62829 140 aaKnown RBP16.67■□□□□ 0.26
CCDC47-202ENST00000403162 OR8G2PQ6IF36 304 aa16.67■□□□□ 0.26
CCDC47-202ENST00000403162 ACSM6Q6P461 480 aa16.67■□□□□ 0.26
CCDC47-202ENST00000403162 OR51G1Q8NGK1 321 aa16.67■□□□□ 0.26
CCDC47-202ENST00000403162 RTL8AQ9BWD3 113 aa16.67■□□□□ 0.26
CCDC47-202ENST00000403162 ACACAQ13085 2346 aa16.67■□□□□ 0.26
CCDC47-202ENST00000403162 CEACAM4O75871 244 aa16.67■□□□□ 0.26
CCDC47-202ENST00000403162 MDKP21741 143 aaPredicted RBP16.67■□□□□ 0.26
CCDC47-202ENST00000403162 JOSD1Q15040 202 aaPredicted RBP16.67■□□□□ 0.26
CCDC47-202ENST00000403162 MDS2Q8NDY4 140 aa16.67■□□□□ 0.26
CCDC47-202ENST00000403162 MANBALQ9NQG1 85 aa16.67■□□□□ 0.26
CCDC47-202ENST00000403162 KIAA2026Q5HYC2 2103 aa16.66■□□□□ 0.26
CCDC47-202ENST00000403162 MBP02144 154 aa16.66■□□□□ 0.26
CCDC47-202ENST00000403162 SP1P08047 785 aa16.66■□□□□ 0.26
CCDC47-202ENST00000403162 COL10A1Q03692 680 aa16.66■□□□□ 0.26
CCDC47-202ENST00000403162 OR1P1Q8NH06 330 aa16.66■□□□□ 0.26
CCDC47-202ENST00000403162 TMEM147Q9BVK8 224 aa16.66■□□□□ 0.26
CCDC47-202ENST00000403162 GP6Q9HCN6 339 aa16.66■□□□□ 0.26
CCDC47-202ENST00000403162 GAB2Q9UQC2 676 aa16.66■□□□□ 0.26
CCDC47-202ENST00000403162 ARHGAP21Q5T5U3 1957 aa16.66■□□□□ 0.26
CCDC47-202ENST00000403162 H7BYZ3 331 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 P0C879 139 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 CD46P15529 392 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 MSMO1Q15800 293 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 NUFIP2Q7Z417 695 aaKnown RBP16.65■□□□□ 0.26
CCDC47-202ENST00000403162 WDR86Q86TI4 376 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 ZBTB34Q8NCN2 500 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 OR5B12Q96R08 314 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 OR51B6Q9H340 312 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 POLDIP2Q9Y2S7 368 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 LOC400499M0QZD8 3231 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 URB1O60287 2271 aaKnown RBP16.65■□□□□ 0.26
CCDC47-202ENST00000403162 AMBPP02760 352 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 MAGEA5P43359 124 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 GALR1P47211 349 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 ZNF146Q15072 292 aa16.65■□□□□ 0.26
CCDC47-202ENST00000403162 ZNF645Q8N7E2 425 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms