RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 C1QL4Q86Z23 238 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 IL1F10Q8WWZ1 152 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 YPEL4Q96NS1 127 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 OR51B6Q9H340 312 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 LIN7CQ9NUP9 197 aaKnown RBP13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 A0A087WWC5 75 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 SLC33A1O00400 549 aaPredicted RBP13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 IGKV3-15P01624 115 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 ACAA1P09110 424 aaPredicted RBP13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 GRNP28799 593 aaKnown RBP13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 CTAG1AP78358 180 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 KHDC3LQ587J8 217 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 SLC25A24Q6NUK1 477 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 ZNF295-AS1Q8N0V1 137 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 OR10G4Q8NGN3 311 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 CLDND2Q8NHS1 167 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 TCEAL7Q9BRU2 100 aa13.37□□□□□ -0.27
CHRFAM7A-203ENST00000401522 IFNA17P01571 189 aa13.36□□□□□ -0.27
CHRFAM7A-203ENST00000401522 IGLV2-14P01704 120 aa13.36□□□□□ -0.27
CHRFAM7A-203ENST00000401522 ERVK11-1P61568 191 aa13.36□□□□□ -0.27
CHRFAM7A-203ENST00000401522 SPATA46Q5T0L3 261 aa13.36□□□□□ -0.27
CHRFAM7A-203ENST00000401522 SCGB1C1Q8TD33 95 aa13.36□□□□□ -0.27
CHRFAM7A-203ENST00000401522 WFIKKN1Q96NZ8 548 aa13.36□□□□□ -0.27
CHRFAM7A-203ENST00000401522 CACNG5Q9UF02 275 aa13.36□□□□□ -0.27
CHRFAM7A-203ENST00000401522 HCFC1P51610 2035 aa13.36□□□□□ -0.27
CHRFAM7A-203ENST00000401522 SYNGR2O43760 224 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 OR2H2O95918 312 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 IGKV1-39P01597 117 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 IGKV1D-39P04432 117 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 S100A9P06702 114 aaKnown RBP13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 TMEM267Q0VDI3 215 aaPredicted RBP13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 THNSL2Q86YJ6 484 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 SCCPDHQ8NBX0 429 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 RAB39BQ96DA2 213 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 TRAPPC2LQ9UL33 140 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 RNF150Q9ULK6 438 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 RNF212BA8MTL3 300 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 SIRPB1O00241 398 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 IGLV1-44P01699 117 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 IGHV2-5P01817 119 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 THBDP07204 575 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 OR8U8P0C7N1 319 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 RNF224P0DH78 156 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 UBE2KP61086 200 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 C3orf36Q3SXR2 165 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 ADAM5Q6NVV9 412 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 HEPN1Q6WQI6 88 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 Q6ZRM9 215 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 WDR86Q86TI4 376 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 ZNF429Q86V71 674 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 PSMG3Q9BT73 122 aaPredicted RBP13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 MBNL3Q9NUK0 354 aaKnown RBP13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 PPP1R3CQ9UQK1 317 aa13.35□□□□□ -0.27
CHRFAM7A-203ENST00000401522 USP9XQ93008 2570 aaPredicted RBP13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 LOC102723971A0A1B0GUV8 181 aa13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 A0A1W2PPE3 182 aa13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 H3BP45 60 aa13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 IGKV1-5P01602 117 aa13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 PGA5P0DJD9 388 aa13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 TAGLN2P37802 199 aaKnown RBP13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 PPP1CBP62140 327 aa13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 HBG1P69891 147 aa13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 HBG2P69892 147 aa13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 ZNF146Q15072 292 aa13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 SLC35E3Q7Z769 313 aa13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 CYB561D1Q8N8Q1 229 aa13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 TVP23CQ96ET8 276 aa13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 NIPSNAP3BQ9BS92 247 aa13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 SEBOXQ9HB31 216 aaPredicted RBP13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 CDH20Q9HBT6 801 aa13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 PSENENQ9NZ42 101 aa13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 KCNS2Q9ULS6 477 aa13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 WIPI2Q9Y4P8 454 aa13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 RBM7Q9Y580 266 aaKnown RBP13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 ADGRG4Q8IZF6 3080 aa13.34□□□□□ -0.27
CHRFAM7A-203ENST00000401522 DOPEY1Q5JWR5 2465 aa13.33□□□□□ -0.27
CHRFAM7A-203ENST00000401522 SH2D1BO14796 132 aa13.33□□□□□ -0.28
CHRFAM7A-203ENST00000401522 SMPD2O60906 423 aa13.33□□□□□ -0.28
CHRFAM7A-203ENST00000401522 FABP9Q0Z7S8 132 aa13.33□□□□□ -0.28
CHRFAM7A-203ENST00000401522 PARD6GQ9BYG4 376 aaPredicted RBP13.33□□□□□ -0.28
CHRFAM7A-203ENST00000401522 SIRT7Q9NRC8 400 aa13.33□□□□□ -0.28
CHRFAM7A-203ENST00000401522 SPTBN1Q01082 2364 aaKnown RBP13.33□□□□□ -0.28
CHRFAM7A-203ENST00000401522 CXorf65A6NEN9 183 aa13.33□□□□□ -0.28
CHRFAM7A-203ENST00000401522 FAM90A26D6RGX4 464 aa13.33□□□□□ -0.28
CHRFAM7A-203ENST00000401522 AP4M1O00189 453 aa13.33□□□□□ -0.28
CHRFAM7A-203ENST00000401522 NXPH2O95156 264 aa13.33□□□□□ -0.28
CHRFAM7A-203ENST00000401522 SELEP16581 610 aa13.33□□□□□ -0.28
CHRFAM7A-203ENST00000401522 IDH3GP51553 393 aaPredicted RBP13.33□□□□□ -0.28
CHRFAM7A-203ENST00000401522 B2MP61769 119 aa13.33□□□□□ -0.28
CHRFAM7A-203ENST00000401522 IZUMO4Q1ZYL8 232 aa13.33□□□□□ -0.28
CHRFAM7A-203ENST00000401522 ZNF585BQ52M93 769 aa13.33□□□□□ -0.28
CHRFAM7A-203ENST00000401522 ZNF525Q8N782 197 aa13.33□□□□□ -0.28
CHRFAM7A-203ENST00000401522 TRAV39A0A0B4J263 110 aa13.32□□□□□ -0.28
CHRFAM7A-203ENST00000401522 TMEM210A6NLX4 147 aa13.32□□□□□ -0.28
CHRFAM7A-203ENST00000401522 C3orf80F5H4A9 247 aa13.32□□□□□ -0.28
CHRFAM7A-203ENST00000401522 H0YL77 283 aa13.32□□□□□ -0.28
CHRFAM7A-203ENST00000401522 CELA3BP08861 270 aa13.32□□□□□ -0.28
CHRFAM7A-203ENST00000401522 RAC2P15153 192 aa13.32□□□□□ -0.28
CHRFAM7A-203ENST00000401522 IGFBP2P18065 325 aa13.32□□□□□ -0.28
CHRFAM7A-203ENST00000401522 CEBPGP53567 150 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms