RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 ZNF660Q6AZW8 331 aaPredicted RBP15.61■□□□□ 0.09
COL18A1-204ENST00000400337 NMBP08949 121 aa15.61■□□□□ 0.09
COL18A1-204ENST00000400337 OR10J1P30954 320 aa15.61■□□□□ 0.09
COL18A1-204ENST00000400337 HLA-DRB5Q30154 266 aa15.61■□□□□ 0.09
COL18A1-204ENST00000400337 ZNF658BQ4V348 819 aaPredicted RBP15.61■□□□□ 0.09
COL18A1-204ENST00000400337 LRRC75AQ8NAA5 344 aa15.61■□□□□ 0.09
COL18A1-204ENST00000400337 GPR146Q96CH1 333 aa15.61■□□□□ 0.09
COL18A1-204ENST00000400337 STARD4Q96DR4 205 aa15.61■□□□□ 0.09
COL18A1-204ENST00000400337 SAXO1Q8IYX7 474 aa15.61■□□□□ 0.09
COL18A1-204ENST00000400337 RBKSQ9H477 322 aa15.61■□□□□ 0.09
COL18A1-204ENST00000400337 IGKV1D-43A0A0B4J1Z2 117 aa15.61■□□□□ 0.09
COL18A1-204ENST00000400337 BCL2P10415 239 aa15.61■□□□□ 0.09
COL18A1-204ENST00000400337 GDF9O60383 454 aa15.6■□□□□ 0.09
COL18A1-204ENST00000400337 MUC1P15941 1255 aaPredicted RBP15.6■□□□□ 0.09
COL18A1-204ENST00000400337 UNC119Q13432 240 aa15.6■□□□□ 0.09
COL18A1-204ENST00000400337 GTF2H5Q6ZYL4 71 aa15.6■□□□□ 0.09
COL18A1-204ENST00000400337 CYB561D1Q8N8Q1 229 aa15.6■□□□□ 0.09
COL18A1-204ENST00000400337 PAXXQ9BUH6 204 aa15.6■□□□□ 0.09
COL18A1-204ENST00000400337 CEACAM18A8MTB9 384 aa15.6■□□□□ 0.09
COL18A1-204ENST00000400337 HTN1P15515 57 aa15.6■□□□□ 0.09
COL18A1-204ENST00000400337 MC5RP33032 325 aa15.6■□□□□ 0.09
COL18A1-204ENST00000400337 TUSC1Q2TAM9 212 aa15.6■□□□□ 0.09
COL18A1-204ENST00000400337 HIGD1AQ9Y241 93 aa15.6■□□□□ 0.09
COL18A1-204ENST00000400337 H2BFSP57053 126 aa15.6■□□□□ 0.09
COL18A1-204ENST00000400337 HCP5Q6MZN7 132 aa15.6■□□□□ 0.09
COL18A1-204ENST00000400337 C16orf82Q7Z2V1 217 aa15.6■□□□□ 0.09
COL18A1-204ENST00000400337 OR4C5Q8NGB2 326 aa15.6■□□□□ 0.09
COL18A1-204ENST00000400337 ABCA7Q8IZY2 2146 aa15.6■□□□□ 0.09
COL18A1-204ENST00000400337 OR2T8A6NH00 312 aa15.6■□□□□ 0.09
COL18A1-204ENST00000400337 SELENOHQ8IZQ5 122 aaKnown RBP15.6■□□□□ 0.09
COL18A1-204ENST00000400337 ZNF703Q9H7S9 590 aaPredicted RBP15.6■□□□□ 0.09
COL18A1-204ENST00000400337 HYPMO75409 117 aa15.59■□□□□ 0.09
COL18A1-204ENST00000400337 HKR1P10072 659 aa15.59■□□□□ 0.09
COL18A1-204ENST00000400337 HIST3H3Q16695 136 aa15.59■□□□□ 0.09
COL18A1-204ENST00000400337 OR52M1Q8NGK5 317 aa15.59■□□□□ 0.09
COL18A1-204ENST00000400337 PACRGQ96M98 296 aaPredicted RBP15.59■□□□□ 0.09
COL18A1-204ENST00000400337 NRIP2Q9BQI9 281 aa15.59■□□□□ 0.09
COL18A1-204ENST00000400337 RABAC1Q9UI14 185 aa15.59■□□□□ 0.09
COL18A1-204ENST00000400337 PRR19A6NJB7 356 aa15.59■□□□□ 0.09
COL18A1-204ENST00000400337 IER3P46695 156 aa15.59■□□□□ 0.09
COL18A1-204ENST00000400337 COX19Q49B96 90 aa15.59■□□□□ 0.09
COL18A1-204ENST00000400337 LRP11Q86VZ4 500 aa15.59■□□□□ 0.09
COL18A1-204ENST00000400337 LEAP2Q969E1 77 aa15.59■□□□□ 0.09
COL18A1-204ENST00000400337 HOXA6P31267 233 aa15.59■□□□□ 0.09
COL18A1-204ENST00000400337 OR2D3Q8NGH3 330 aa15.59■□□□□ 0.09
COL18A1-204ENST00000400337 TUBD1Q9UJT1 453 aa15.59■□□□□ 0.09
COL18A1-204ENST00000400337 SCGB1C2P0DMR2 95 aa15.59■□□□□ 0.09
COL18A1-204ENST00000400337 GLIPR1P48060 266 aa15.59■□□□□ 0.09
COL18A1-204ENST00000400337 RPL8P62917 257 aaKnown RBP15.59■□□□□ 0.09
COL18A1-204ENST00000400337 RIGQ13278 110 aa15.59■□□□□ 0.09
COL18A1-204ENST00000400337 METTL1Q9UBP6 276 aaKnown RBP15.59■□□□□ 0.09
COL18A1-204ENST00000400337 CEP250Q9BV73 2442 aa15.58■□□□□ 0.09
COL18A1-204ENST00000400337 TMSB15BA0A087X1C1 80 aa15.58■□□□□ 0.09
COL18A1-204ENST00000400337 P2RX4Q99571 388 aa15.58■□□□□ 0.09
COL18A1-204ENST00000400337 IDI2-AS1Q9NZ38 188 aa15.58■□□□□ 0.09
COL18A1-204ENST00000400337 TMEM97Q5BJF2 176 aa15.58■□□□□ 0.08
COL18A1-204ENST00000400337 OVCH2Q7RTZ1 564 aa15.58■□□□□ 0.08
COL18A1-204ENST00000400337 WFDC3Q8IUB2 231 aa15.58■□□□□ 0.08
COL18A1-204ENST00000400337 SFXN3Q9BWM7 321 aa15.58■□□□□ 0.08
COL18A1-204ENST00000400337 ZNF552Q9H707 407 aaPredicted RBP15.58■□□□□ 0.08
COL18A1-204ENST00000400337 IL19Q9UHD0 177 aa15.58■□□□□ 0.08
COL18A1-204ENST00000400337 FAM74A7A6NL05 159 aa15.58■□□□□ 0.08
COL18A1-204ENST00000400337 LILRB1Q8NHL6 650 aaPredicted RBP15.58■□□□□ 0.08
COL18A1-204ENST00000400337 LOC390937A0A1W2PQ73 354 aa15.58■□□□□ 0.08
COL18A1-204ENST00000400337 SNURFLB1AK76 121 aa15.58■□□□□ 0.08
COL18A1-204ENST00000400337 ATXN7O15265 892 aaPredicted RBP15.58■□□□□ 0.08
COL18A1-204ENST00000400337 PRSS1P07477 247 aa15.58■□□□□ 0.08
COL18A1-204ENST00000400337 SHISA5Q8N114 240 aa15.58■□□□□ 0.08
COL18A1-204ENST00000400337 CBY3A6NI87 242 aa15.58■□□□□ 0.08
COL18A1-204ENST00000400337 CLEC2AQ6UVW9 174 aa15.58■□□□□ 0.08
COL18A1-204ENST00000400337 GSX1Q9H4S2 264 aaPredicted RBP15.58■□□□□ 0.08
COL18A1-204ENST00000400337 SMPD2O60906 423 aa15.57■□□□□ 0.08
COL18A1-204ENST00000400337 HIST1H1EP10412 219 aaKnown RBP15.57■□□□□ 0.08
COL18A1-204ENST00000400337 RPL13AP40429 203 aaKnown RBP15.57■□□□□ 0.08
COL18A1-204ENST00000400337 KCNMB1Q16558 191 aa15.57■□□□□ 0.08
COL18A1-204ENST00000400337 ZNF318Q5VUA4 2279 aa15.57■□□□□ 0.08
COL18A1-204ENST00000400337 ELOBQ15370 118 aa15.57■□□□□ 0.08
COL18A1-204ENST00000400337 Q6ZT83 130 aa15.57■□□□□ 0.08
COL18A1-204ENST00000400337 CFDP00746 253 aaPredicted RBP15.57■□□□□ 0.08
COL18A1-204ENST00000400337 CD74P04233 296 aa15.57■□□□□ 0.08
COL18A1-204ENST00000400337 ZNF818PQ6ZRF7 136 aa15.57■□□□□ 0.08
COL18A1-204ENST00000400337 OR11H4Q8NGC9 324 aa15.57■□□□□ 0.08
COL18A1-204ENST00000400337 TMEM140Q9NV12 185 aa15.57■□□□□ 0.08
COL18A1-204ENST00000400337 IL36RNQ9UBH0 155 aa15.57■□□□□ 0.08
COL18A1-204ENST00000400337 ZIC3O60481 467 aa15.57■□□□□ 0.08
COL18A1-204ENST00000400337 SNRNP40Q96DI7 357 aaKnown RBP15.57■□□□□ 0.08
COL18A1-204ENST00000400337 LINC00470Q9BZP3 86 aa15.57■□□□□ 0.08
COL18A1-204ENST00000400337 RNF115Q9Y4L5 304 aa15.57■□□□□ 0.08
COL18A1-204ENST00000400337 A0A0G2JMM0 328 aa15.56■□□□□ 0.08
COL18A1-204ENST00000400337 A0A1W2PPB8 328 aa15.56■□□□□ 0.08
COL18A1-204ENST00000400337 A0A1W2PRS3 328 aa15.56■□□□□ 0.08
COL18A1-204ENST00000400337 KIR3DP1A8MWS1 328 aa15.56■□□□□ 0.08
COL18A1-204ENST00000400337 LINC00869P0C866 280 aa15.56■□□□□ 0.08
COL18A1-204ENST00000400337 IZUMO4Q1ZYL8 232 aa15.56■□□□□ 0.08
COL18A1-204ENST00000400337 C1QL2Q7Z5L3 287 aa15.56■□□□□ 0.08
COL18A1-204ENST00000400337 OR5P3Q8WZ94 311 aa15.56■□□□□ 0.08
COL18A1-204ENST00000400337 ZNF883P0CG24 379 aa15.56■□□□□ 0.08
COL18A1-204ENST00000400337 GUCA2BQ16661 112 aa15.56■□□□□ 0.08
COL18A1-204ENST00000400337 PTGDSP41222 190 aa15.56■□□□□ 0.08
COL18A1-204ENST00000400337 Q5BKY6 102 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms