RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 SGK494Q96LW2 274 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 F11RQ9Y624 299 aaKnown RBP12.55□□□□□ -0.4
TNRC18-203ENST00000399537 TMEM56-RWDD3S4R434 201 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 NPIPB6E9PJ23 425 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 CDS2O95674 445 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 ZBTB34Q8NCN2 500 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 CEACAM18A8MTB9 384 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 CDC42EP3Q9UKI2 254 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 A0A1B0GV72 72 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 A0A1W2PQD3 144 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 C16orf97H3BN30 126 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 EFNB2P52799 333 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 SRSF5Q13243 272 aaKnown RBP12.55□□□□□ -0.4
TNRC18-203ENST00000399537 HSPB9Q9BQS6 159 aa12.55□□□□□ -0.4
TNRC18-203ENST00000399537 IGHV3OR16-12A0A075B7B8 117 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 AMY1AP04745 511 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 CTGFP29279 349 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 ERVFRD-1P60508 538 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 SGMS2Q8NHU3 365 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 ZNF714Q96N38 554 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 C21orf140B9A014 251 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 TSPAN13O95857 204 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 CCL3P10147 92 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 LIFP15018 202 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 CKS2P33552 79 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 SPG11Q96JI7 2443 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 DLX6P56179 175 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 GCSAMLQ5JQS6 135 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 TMEM92Q6UXU6 159 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 LSM10Q969L4 123 aaKnown RBP12.54□□□□□ -0.4
TNRC18-203ENST00000399537 PGLYRP4Q96LB8 373 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 TIMP4Q99727 224 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 SHANK3Q9BYB0 1731 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 A8MWL6 223 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 C1QAP02745 245 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 BHLHA9Q7RTU4 235 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 CHRNA10Q9GZZ6 450 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 PRF1P14222 555 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 PSG6Q00889 435 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 RHOVQ96L33 236 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 ADRA2AP08913 450 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 C8orf82Q6P1X6 216 aaPredicted RBP12.54□□□□□ -0.4
TNRC18-203ENST00000399537 DPH3Q96FX2 82 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 PGLYRP3Q96LB9 341 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 VWA8A3KMH1 1905 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 IGKV3D-15A0A087WSY6 115 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 IGKV3D-11A0A0A0MRZ8 115 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 ERVH48-1M5A8F1 160 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 PPP1R17O96001 155 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 IGKV3-15P01624 115 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 IGKV3-11P04433 115 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 CISD3P0C7P0 127 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 RBM11P57052 281 aaKnown RBP12.54□□□□□ -0.4
TNRC18-203ENST00000399537 INO80CQ6PI98 192 aaPredicted RBP12.54□□□□□ -0.4
TNRC18-203ENST00000399537 MS4A3Q96HJ5 214 aa12.54□□□□□ -0.4
TNRC18-203ENST00000399537 KLK2P20151 261 aa12.53□□□□□ -0.4
TNRC18-203ENST00000399537 COX14Q96I36 57 aa12.53□□□□□ -0.4
TNRC18-203ENST00000399537 HILPDAQ9Y5L2 63 aa12.53□□□□□ -0.4
TNRC18-203ENST00000399537 GLI3P10071 1580 aa12.53□□□□□ -0.4
TNRC18-203ENST00000399537 FAM106CPP0CH98 169 aa12.53□□□□□ -0.4
TNRC18-203ENST00000399537 CIRBPQ14011 172 aaKnown RBP12.53□□□□□ -0.4
TNRC18-203ENST00000399537 ALG14Q96F25 216 aa12.53□□□□□ -0.4
TNRC18-203ENST00000399537 TNFSF18Q9UNG2 199 aa12.53□□□□□ -0.4
TNRC18-203ENST00000399537 PXMP4Q9Y6I8 212 aa12.53□□□□□ -0.4
TNRC18-203ENST00000399537 WNT9BO14905 357 aa12.53□□□□□ -0.4
TNRC18-203ENST00000399537 HBZP02008 142 aa12.53□□□□□ -0.4
TNRC18-203ENST00000399537 VSIG10L2P0DP72 767 aa12.53□□□□□ -0.4
TNRC18-203ENST00000399537 CXCL2P19875 107 aa12.53□□□□□ -0.4
TNRC18-203ENST00000399537 GUCD1Q96NT3 240 aa12.53□□□□□ -0.4
TNRC18-203ENST00000399537 COL25A1Q9BXS0 654 aaPredicted RBP12.53□□□□□ -0.4
TNRC18-203ENST00000399537 HRKO00198 91 aa12.53□□□□□ -0.4
TNRC18-203ENST00000399537 GAGE10A6NGK3 116 aa12.53□□□□□ -0.4
TNRC18-203ENST00000399537 H1FOOQ8IZA3 346 aaPredicted RBP12.53□□□□□ -0.4
TNRC18-203ENST00000399537 BRWD3Q6RI45 1802 aa12.53□□□□□ -0.4
TNRC18-203ENST00000399537 GREB1LQ9C091 1923 aaPredicted RBP12.52□□□□□ -0.4
TNRC18-203ENST00000399537 TRBV5-3A0A0A0MS03 114 aa12.52□□□□□ -0.4
TNRC18-203ENST00000399537 EMP1P54849 157 aa12.52□□□□□ -0.4
TNRC18-203ENST00000399537 ZIC1Q15915 447 aa12.52□□□□□ -0.4
TNRC18-203ENST00000399537 EID2BQ96D98 161 aa12.52□□□□□ -0.4
TNRC18-203ENST00000399537 OR2V2Q96R30 315 aa12.52□□□□□ -0.4
TNRC18-203ENST00000399537 IGHV5-10-1A0A0J9YXX1 117 aa12.52□□□□□ -0.4
TNRC18-203ENST00000399537 COL9A1P20849 921 aa12.52□□□□□ -0.4
TNRC18-203ENST00000399537 WDR25Q64LD2 544 aaPredicted RBP12.52□□□□□ -0.4
TNRC18-203ENST00000399537 WIPI2Q9Y4P8 454 aa12.52□□□□□ -0.4
TNRC18-203ENST00000399537 TMEM177Q53S58 311 aa12.52□□□□□ -0.4
TNRC18-203ENST00000399537 HDHD3Q9BSH5 251 aaPredicted RBP12.52□□□□□ -0.41
TNRC18-203ENST00000399537 DLL1O00548 723 aa12.52□□□□□ -0.41
TNRC18-203ENST00000399537 CLDN14O95500 239 aa12.52□□□□□ -0.41
TNRC18-203ENST00000399537 SCNM1Q9BWG6 230 aa12.52□□□□□ -0.41
TNRC18-203ENST00000399537 FBXW9Q5XUX1 488 aa12.52□□□□□ -0.41
TNRC18-203ENST00000399537 FAM131CQ96AQ9 280 aa12.52□□□□□ -0.41
TNRC18-203ENST00000399537 MAP1LC3AQ9H492 121 aa12.52□□□□□ -0.41
TNRC18-203ENST00000399537 BGLAPP02818 100 aa12.51□□□□□ -0.41
TNRC18-203ENST00000399537 JOSD1Q15040 202 aaPredicted RBP12.51□□□□□ -0.41
TNRC18-203ENST00000399537 TTC32Q5I0X7 151 aa12.51□□□□□ -0.41
TNRC18-203ENST00000399537 CLEC2AQ6UVW9 174 aa12.51□□□□□ -0.41
TNRC18-203ENST00000399537 CA11O75493 328 aa12.51□□□□□ -0.41
TNRC18-203ENST00000399537 C12orf54Q6X4T0 127 aa12.51□□□□□ -0.41
TNRC18-203ENST00000399537 C10orf111Q8N326 155 aa12.51□□□□□ -0.41
TNRC18-203ENST00000399537 ZPLD1Q8TCW7 415 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms