RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 HCP5Q6MZN7 132 aa10.19□□□□□ -0.78
TMF1-201ENST00000398559 CDX2Q99626 313 aaPredicted RBP10.19□□□□□ -0.78
TMF1-201ENST00000398559 SCNM1Q9BWG6 230 aa10.19□□□□□ -0.78
TMF1-201ENST00000398559 RPL27AP46776 148 aaKnown RBP10.18□□□□□ -0.78
TMF1-201ENST00000398559 GFRA1P56159 465 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 KCNMB1Q16558 191 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 PRSS53Q2L4Q9 553 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 DLL1O00548 723 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 NUBP1P53384 320 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 OR10S1Q8NGN2 331 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 TMEM45BQ96B21 275 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 C16orf92Q96LL3 132 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 ISG15P05161 165 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 IGKV1-8A0A0C4DH67 115 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 AGAP20933 346 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 UCP2P55851 309 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 PARLQ9H300 379 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 CBLN4Q9NTU7 201 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 HILPDAQ9Y5L2 63 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 F11RQ9Y624 299 aaKnown RBP10.18□□□□□ -0.78
TMF1-201ENST00000398559 A0A0B4J293 547 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 NHLRC3Q5JS37 347 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 OR4A5Q8NH83 315 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 CRISPLD2Q9H0B8 497 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 WDR54Q9H977 334 aa10.18□□□□□ -0.78
TMF1-201ENST00000398559 COX6CP09669 75 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 FGFRL1Q8N441 504 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 OR10J6PQ8NGY7 276 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 PRR7Q8TB68 274 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 NEU1Q99519 415 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 CDK2AP1O14519 115 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 SRIP30626 198 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 SNAI3Q3KNW1 292 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 C5orf66Q9H5L9 145 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 METTL1Q9UBP6 276 aaKnown RBP10.17□□□□□ -0.78
TMF1-201ENST00000398559 HOXD4P09016 255 aaPredicted RBP10.17□□□□□ -0.78
TMF1-201ENST00000398559 TRGC1P0CF51 173 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 CDX1P47902 265 aaPredicted RBP10.17□□□□□ -0.78
TMF1-201ENST00000398559 CCL8P80075 99 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 Q5BKY6 102 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 ATOH7Q8N100 152 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 APOBEC4Q8WW27 367 aaKnown RBP10.17□□□□□ -0.78
TMF1-201ENST00000398559 C16orf97H3BN30 126 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 MGST3O14880 152 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 FOLR2P14207 255 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 KIAA1644Q3SXP7 199 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 TMEM177Q53S58 311 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 CCDC144NLQ6NUI1 221 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 TXNDC17Q9BRA2 123 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 RTN4RQ9BZR6 473 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 TRBV5-7A0A0A0MS05 114 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 TFPI2P48307 235 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 UNC119Q13432 240 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 HERPUD1Q15011 391 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 AMMECR1LQ6DCA0 310 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 SLC25A34Q6PIV7 304 aa10.17□□□□□ -0.78
TMF1-201ENST00000398559 GCM2O75603 506 aaPredicted RBP10.16□□□□□ -0.78
TMF1-201ENST00000398559 CELA2AP08217 269 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 TAS2R60P59551 318 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 C19orf54Q5BKX5 351 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 FAM53AQ6NSI3 398 aaPredicted RBP10.16□□□□□ -0.78
TMF1-201ENST00000398559 MAP1LC3AQ9H492 121 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 UBE2L6O14933 153 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 TSPAN2O60636 221 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 TFF2Q03403 129 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 ZNF441Q8N8Z8 693 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 MARS2Q96GW9 593 aaKnown RBP10.16□□□□□ -0.78
TMF1-201ENST00000398559 GUCD1Q96NT3 240 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 QTRT1Q9BXR0 403 aaKnown RBP10.16□□□□□ -0.78
TMF1-201ENST00000398559 MCM3APO60318 1980 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 GRIFINA4D1Z8 144 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 IL9P15248 144 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 DCAF10Q5QP82 559 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 CALHM1Q8IU99 346 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 GCSAMQ8N6F7 178 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 KCNK17Q96T54 332 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 PRSS8Q16651 343 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 SLC25A47Q6Q0C1 308 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 CD200R1LQ6Q8B3 271 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 DMRT1Q9Y5R6 373 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 USP54Q70EL1 1684 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 A0A1B0GV90 55 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 LNP1A1A4G5 178 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 ERVFRD-1P60508 538 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 ZNF826PQ6ZT77 177 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 GGACTQ9BVM4 153 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 MYO7AQ13402 2215 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 IGKV3D-15A0A087WSY6 115 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 IGLV1-36A0A0B4J1U3 117 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 RECKO95980 971 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 IGKV3-15P01624 115 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 ADRA2AP08913 450 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 DANCRP0C864 163 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 GLIPR1P48060 266 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 C2orf83Q53S99 150 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 C1orf100Q5SVJ3 147 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 SYT8Q8NBV8 401 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 HIST1H2BAQ96A08 127 aa10.16□□□□□ -0.78
TMF1-201ENST00000398559 ZNF430Q9H8G1 570 aaPredicted RBP10.16□□□□□ -0.78
TMF1-201ENST00000398559 ZG16O60844 167 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms