RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 POMT1Q9Y6A1 747 aa12.33□□□□□ -0.44
CAPN3-207ENST00000397200 IGHV4-30-2A0A087WSY4 118 aa12.32□□□□□ -0.44
CAPN3-207ENST00000397200 VWC2LB2RUY7 222 aa12.32□□□□□ -0.44
CAPN3-207ENST00000397200 ST8SIA3O43173 380 aa12.32□□□□□ -0.44
CAPN3-207ENST00000397200 ZP3P21754 424 aa12.32□□□□□ -0.44
CAPN3-207ENST00000397200 S100GP29377 79 aa12.32□□□□□ -0.44
CAPN3-207ENST00000397200 EIF5AP63241 154 aaKnown RBP12.32□□□□□ -0.44
CAPN3-207ENST00000397200 PRSS57Q6UWY2 283 aa12.32□□□□□ -0.44
CAPN3-207ENST00000397200 ZNRF1Q8ND25 227 aa12.32□□□□□ -0.44
CAPN3-207ENST00000397200 DMBX1Q8NFW5 382 aa12.32□□□□□ -0.44
CAPN3-207ENST00000397200 SNX22Q96L94 193 aa12.32□□□□□ -0.44
CAPN3-207ENST00000397200 TAF9BQ9HBM6 251 aa12.32□□□□□ -0.44
CAPN3-207ENST00000397200 LSM5Q9Y4Y9 91 aaKnown RBP12.32□□□□□ -0.44
CAPN3-207ENST00000397200 ZNF737O75373 536 aa12.31□□□□□ -0.44
CAPN3-207ENST00000397200 SLC25A16P16260 332 aa12.31□□□□□ -0.44
CAPN3-207ENST00000397200 VDAC1P21796 283 aa12.31□□□□□ -0.44
CAPN3-207ENST00000397200 P2RY1P47900 373 aa12.31□□□□□ -0.44
CAPN3-207ENST00000397200 GPR157Q5UAW9 335 aa12.31□□□□□ -0.44
CAPN3-207ENST00000397200 DUX4L9Q6RFH8 374 aaPredicted RBP12.31□□□□□ -0.44
CAPN3-207ENST00000397200 ZNF695Q8IW36 515 aa12.31□□□□□ -0.44
CAPN3-207ENST00000397200 CCDC28AQ8IWP9 274 aa12.31□□□□□ -0.44
CAPN3-207ENST00000397200 CTSZQ9UBR2 303 aa12.31□□□□□ -0.44
CAPN3-207ENST00000397200 RCL1Q9Y2P8 373 aaKnown RBP12.31□□□□□ -0.44
CAPN3-207ENST00000397200 TRAV39A0A0B4J263 110 aa12.3□□□□□ -0.44
CAPN3-207ENST00000397200 C12orf77C9JDV5 145 aa12.3□□□□□ -0.44
CAPN3-207ENST00000397200 K7N7A8 449 aa12.3□□□□□ -0.44
CAPN3-207ENST00000397200 NDUFB3O43676 98 aa12.3□□□□□ -0.44
CAPN3-207ENST00000397200 SCGB1D2O95969 90 aa12.3□□□□□ -0.44
CAPN3-207ENST00000397200 SELLP14151 372 aa12.3□□□□□ -0.44
CAPN3-207ENST00000397200 MSMO1Q15800 293 aa12.3□□□□□ -0.44
CAPN3-207ENST00000397200 LRRC10Q5BKY1 277 aa12.3□□□□□ -0.44
CAPN3-207ENST00000397200 FOXRED2Q8IWF2 684 aa12.3□□□□□ -0.44
CAPN3-207ENST00000397200 OR8B3Q8NGG8 313 aa12.3□□□□□ -0.44
CAPN3-207ENST00000397200 IL1F10Q8WWZ1 152 aa12.3□□□□□ -0.44
CAPN3-207ENST00000397200 NEIL1Q96FI4 390 aaPredicted RBP12.3□□□□□ -0.44
CAPN3-207ENST00000397200 OR8B2Q96RD0 313 aa12.3□□□□□ -0.44
CAPN3-207ENST00000397200 FOXC2Q99958 501 aa12.3□□□□□ -0.44
CAPN3-207ENST00000397200 FAM234AQ9H0X4 552 aa12.3□□□□□ -0.44
CAPN3-207ENST00000397200 ARV1Q9H2C2 271 aa12.3□□□□□ -0.44
CAPN3-207ENST00000397200 PATZ1Q9HBE1 687 aaKnown RBP12.3□□□□□ -0.44
CAPN3-207ENST00000397200 FBXL17Q9UF56 701 aa12.3□□□□□ -0.44
CAPN3-207ENST00000397200 PDZD2O15018 2839 aa12.3□□□□□ -0.44
CAPN3-207ENST00000397200 ASH1LQ9NR48 2969 aaKnown RBP12.3□□□□□ -0.44
CAPN3-207ENST00000397200 GPR137BO60478 399 aa12.29□□□□□ -0.44
CAPN3-207ENST00000397200 SLC25A6P12236 298 aa12.29□□□□□ -0.44
CAPN3-207ENST00000397200 CLDND2Q8NHS1 167 aa12.29□□□□□ -0.44
CAPN3-207ENST00000397200 GPHA2Q96T91 129 aa12.29□□□□□ -0.44
CAPN3-207ENST00000397200 KCNIP1Q9NZI2 227 aa12.29□□□□□ -0.44
CAPN3-207ENST00000397200 SLC25A10Q9UBX3 287 aaPredicted RBP12.29□□□□□ -0.44
CAPN3-207ENST00000397200 SESN1Q9Y6P5 492 aa12.29□□□□□ -0.44
CAPN3-207ENST00000397200 DVL1O14640 695 aa12.29□□□□□ -0.44
CAPN3-207ENST00000397200 MGST3O14880 152 aa12.29□□□□□ -0.44
CAPN3-207ENST00000397200 FAM157CP0CG43 387 aa12.29□□□□□ -0.44
CAPN3-207ENST00000397200 MMP9P14780 707 aa12.29□□□□□ -0.44
CAPN3-207ENST00000397200 NDUFB7P17568 137 aa12.29□□□□□ -0.44
CAPN3-207ENST00000397200 RPL7L1Q6DKI1 246 aaKnown RBP12.29□□□□□ -0.44
CAPN3-207ENST00000397200 UBAC2Q8NBM4 344 aa12.29□□□□□ -0.44
CAPN3-207ENST00000397200 RNF141Q8WVD5 230 aa12.29□□□□□ -0.44
CAPN3-207ENST00000397200 IGHV4-61A0A0C4DH41 118 aa12.28□□□□□ -0.44
CAPN3-207ENST00000397200 KRBOX1C9JBD0 128 aa12.28□□□□□ -0.44
CAPN3-207ENST00000397200 PITX3O75364 302 aa12.28□□□□□ -0.44
CAPN3-207ENST00000397200 JTBO76095 146 aa12.28□□□□□ -0.44
CAPN3-207ENST00000397200 IGHV2-5P01817 119 aa12.28□□□□□ -0.44
CAPN3-207ENST00000397200 ID3Q02535 119 aa12.28□□□□□ -0.44
CAPN3-207ENST00000397200 EIF4EBP1Q13541 118 aaPredicted RBP12.28□□□□□ -0.44
CAPN3-207ENST00000397200 EDDM3AQ14507 147 aa12.28□□□□□ -0.44
CAPN3-207ENST00000397200 CR1LQ2VPA4 569 aa12.28□□□□□ -0.44
CAPN3-207ENST00000397200 TRAT1Q6PIZ9 186 aa12.28□□□□□ -0.44
CAPN3-207ENST00000397200 KRTAP1-3Q8IUG1 177 aa12.28□□□□□ -0.44
CAPN3-207ENST00000397200 ZBTB34Q8NCN2 500 aa12.28□□□□□ -0.44
CAPN3-207ENST00000397200 OR1L1Q8NH94 360 aa12.28□□□□□ -0.44
CAPN3-207ENST00000397200 TMED6Q8WW62 240 aa12.28□□□□□ -0.44
CAPN3-207ENST00000397200 RAB39BQ96DA2 213 aa12.28□□□□□ -0.44
CAPN3-207ENST00000397200 Q96MF0 132 aa12.28□□□□□ -0.44
CAPN3-207ENST00000397200 PARP12Q9H0J9 701 aaKnown RBP12.28□□□□□ -0.44
CAPN3-207ENST00000397200 CLN8Q9UBY8 286 aa12.28□□□□□ -0.44
CAPN3-207ENST00000397200 DOCK11Q5JSL3 2073 aa12.27□□□□□ -0.44
CAPN3-207ENST00000397200 DSCAML1Q8TD84 2053 aa12.27□□□□□ -0.44
CAPN3-207ENST00000397200 HSPA12AO43301 675 aa12.27□□□□□ -0.44
CAPN3-207ENST00000397200 TNFSF12O43508 249 aa12.27□□□□□ -0.44
CAPN3-207ENST00000397200 HBZP02008 142 aa12.27□□□□□ -0.44
CAPN3-207ENST00000397200 NKX2-1P43699 371 aaPredicted RBP12.27□□□□□ -0.44
CAPN3-207ENST00000397200 EDDM3BP56851 147 aa12.27□□□□□ -0.44
CAPN3-207ENST00000397200 GNB2P62879 340 aa12.27□□□□□ -0.44
CAPN3-207ENST00000397200 AESQ08117 197 aa12.27□□□□□ -0.44
CAPN3-207ENST00000397200 KRBOX4Q5JUW0 171 aa12.27□□□□□ -0.44
CAPN3-207ENST00000397200 EIF5AL1Q6IS14 154 aaKnown RBP12.27□□□□□ -0.44
CAPN3-207ENST00000397200 ZNF841Q6ZN19 808 aa12.27□□□□□ -0.44
CAPN3-207ENST00000397200 FGFRL1Q8N441 504 aa12.27□□□□□ -0.44
CAPN3-207ENST00000397200 LSM10Q969L4 123 aaKnown RBP12.27□□□□□ -0.44
CAPN3-207ENST00000397200 GALMQ96C23 342 aa12.27□□□□□ -0.44
CAPN3-207ENST00000397200 LIN7CQ9NUP9 197 aaKnown RBP12.27□□□□□ -0.44
CAPN3-207ENST00000397200 IGKV1-39P01597 117 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 IGKV1D-39P04432 117 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 USF1P22415 310 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-207ENST00000397200 CEACAM6P40199 344 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 LMO4P61968 165 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 KIAA2026Q5HYC2 2103 aa12.26□□□□□ -0.45
CAPN3-207ENST00000397200 WDR25Q64LD2 544 aaPredicted RBP12.26□□□□□ -0.45
CAPN3-207ENST00000397200 PRR18Q8N4B5 295 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms