RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 Q8N7P7 452 aa11.12□□□□□ -0.63
MCF2L-209ENST00000397036 UXS1Q8NBZ7 420 aa11.12□□□□□ -0.63
MCF2L-209ENST00000397036 BEND2Q8NDZ0 799 aa11.12□□□□□ -0.63
MCF2L-209ENST00000397036 CD300LFQ8TDQ1 290 aa11.12□□□□□ -0.63
MCF2L-209ENST00000397036 TMEM186Q96B77 213 aa11.12□□□□□ -0.63
MCF2L-209ENST00000397036 C5orf30Q96GV9 206 aa11.12□□□□□ -0.63
MCF2L-209ENST00000397036 ADTRPQ96IZ2 230 aa11.12□□□□□ -0.63
MCF2L-209ENST00000397036 C18orf12Q96KH6 178 aa11.12□□□□□ -0.63
MCF2L-209ENST00000397036 S1PR3Q99500 378 aa11.12□□□□□ -0.63
MCF2L-209ENST00000397036 CELSR2Q9HCU4 2923 aa11.11□□□□□ -0.63
MCF2L-209ENST00000397036 RBFOX2O43251 390 aaKnown RBP eCLIP11.11□□□□□ -0.639e-12■■■■□ 24.5
MCF2L-209ENST00000397036 IGLV1-47P01700 117 aa11.11□□□□□ -0.63
MCF2L-209ENST00000397036 USF1P22415 310 aaPredicted RBP11.11□□□□□ -0.63
MCF2L-209ENST00000397036 DUTP33316 252 aaKnown RBP11.11□□□□□ -0.63
MCF2L-209ENST00000397036 PRRX1P54821 245 aa11.11□□□□□ -0.63
MCF2L-209ENST00000397036 CYCSP99999 105 aaKnown RBP11.11□□□□□ -0.63
MCF2L-209ENST00000397036 SP6Q3SY56 376 aa11.11□□□□□ -0.63
MCF2L-209ENST00000397036 OR11H6Q8NGC7 330 aa11.11□□□□□ -0.63
MCF2L-209ENST00000397036 OR13D1Q8NGV5 346 aa11.11□□□□□ -0.63
MCF2L-209ENST00000397036 LEAP2Q969E1 77 aa11.11□□□□□ -0.63
MCF2L-209ENST00000397036 ST6GALNAC6Q969X2 333 aa11.11□□□□□ -0.63
MCF2L-209ENST00000397036 HEXA-AS1Q9H8Q6 139 aa11.11□□□□□ -0.63
MCF2L-209ENST00000397036 RANGRFQ9HD47 186 aaPredicted RBP11.11□□□□□ -0.63
MCF2L-209ENST00000397036 TMED3Q9Y3Q3 217 aa11.11□□□□□ -0.63
MCF2L-209ENST00000397036 ANKRD17O75179 2603 aaKnown RBP11.11□□□□□ -0.63
MCF2L-209ENST00000397036 IGHV2-26A0A0B4J1V2 119 aa11.1□□□□□ -0.63
MCF2L-209ENST00000397036 TNFSF12O43508 249 aa11.1□□□□□ -0.63
MCF2L-209ENST00000397036 IFNA21P01568 189 aa11.1□□□□□ -0.63
MCF2L-209ENST00000397036 SERPINE2P07093 398 aa11.1□□□□□ -0.63
MCF2L-209ENST00000397036 KIR2DS2P43631 304 aa11.1□□□□□ -0.63
MCF2L-209ENST00000397036 H2BFSP57053 126 aa11.1□□□□□ -0.63
MCF2L-209ENST00000397036 ARF6P62330 175 aa11.1□□□□□ -0.63
MCF2L-209ENST00000397036 CD83Q01151 205 aa11.1□□□□□ -0.63
MCF2L-209ENST00000397036 TAGLNQ01995 201 aaKnown RBP11.1□□□□□ -0.63
MCF2L-209ENST00000397036 ZNF585BQ52M93 769 aa11.1□□□□□ -0.63
MCF2L-209ENST00000397036 ZNF833PQ6ZTB9 187 aa11.1□□□□□ -0.63
MCF2L-209ENST00000397036 RBPMSQ93062 196 aaKnown RBP11.1□□□□□ -0.63
MCF2L-209ENST00000397036 CLEC7AQ9BXN2 247 aa11.1□□□□□ -0.63
MCF2L-209ENST00000397036 YLPM1P49750 1951 aaKnown RBP11.1□□□□□ -0.63
MCF2L-209ENST00000397036 GCN1Q92616 2671 aaKnown RBP11.1□□□□□ -0.63
MCF2L-209ENST00000397036 A0A096LNT2 108 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 SAA2-SAA4A0A096LPE2 208 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 GOSR2O14653 212 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 TOR1AO14656 332 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 SAA2P0DJI9 122 aaPredicted RBP11.09□□□□□ -0.63
MCF2L-209ENST00000397036 VDAC1P21796 283 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 IL3RAP26951 378 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 THBS3P49746 956 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 RPL30P62888 115 aaKnown RBP11.09□□□□□ -0.63
MCF2L-209ENST00000397036 LOXL1Q08397 574 aaPredicted RBP11.09□□□□□ -0.63
MCF2L-209ENST00000397036 BTNL3Q6UXE8 466 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 GSG1LQ6UXU4 331 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 SELENOHQ8IZQ5 122 aaKnown RBP11.09□□□□□ -0.63
MCF2L-209ENST00000397036 LYG1Q8N1E2 194 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 OR51H1Q8NH63 302 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 DDB2Q92466 427 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 FYTTD1Q96QD9 318 aaKnown RBP11.09□□□□□ -0.63
MCF2L-209ENST00000397036 SIRPDQ9H106 197 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 ONECUT1Q9UBC0 465 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 PRELID3BQ9Y3B1 194 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 UNC79Q9P2D8 2635 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 APCP25054 2843 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 FAM157AC9JC47 383 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 M0R1X1 148 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 ATG12O94817 140 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 IGHV3-7P01780 117 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 MMP9P14780 707 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 GNG10P50151 68 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 BRWD1-AS2P59051 145 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 LCN2P80188 198 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 PAX8Q06710 450 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 CD300CQ08708 224 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 IL15RAQ13261 267 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 HLA-DRB5Q30154 266 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 C1orf229Q6ZS94 237 aaPredicted RBP11.09□□□□□ -0.63
MCF2L-209ENST00000397036 ZNF695Q8IW36 515 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 OR10X1Q8NGY0 326 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 LHFPL5Q8TAF8 219 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 LSM10Q969L4 123 aaKnown RBP11.09□□□□□ -0.63
MCF2L-209ENST00000397036 C2orf50Q96LR7 162 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 GPHA2Q96T91 129 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 NMES1Q9C002 83 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 WNK2Q9Y3S1 2297 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 INSIG2Q9Y5U4 225 aa11.09□□□□□ -0.63
MCF2L-209ENST00000397036 A0A1W2PPE3 182 aa11.08□□□□□ -0.64
MCF2L-209ENST00000397036 LINC00473A8K010 186 aa11.08□□□□□ -0.64
MCF2L-209ENST00000397036 C1QBP02746 253 aa11.08□□□□□ -0.64
MCF2L-209ENST00000397036 SLC25A6P12236 298 aa11.08□□□□□ -0.64
MCF2L-209ENST00000397036 DVL1P1P54792 670 aaPredicted RBP11.08□□□□□ -0.64
MCF2L-209ENST00000397036 RPL39P5Q59GN2 51 aa11.08□□□□□ -0.64
MCF2L-209ENST00000397036 DCAF12L2Q5VW00 463 aa11.08□□□□□ -0.64
MCF2L-209ENST00000397036 TMEM268Q5VZI3 342 aa11.08□□□□□ -0.64
MCF2L-209ENST00000397036 GGNBP1Q5YKI7 109 aa11.08□□□□□ -0.64
MCF2L-209ENST00000397036 NCR3LG1Q68D85 454 aa11.08□□□□□ -0.64
MCF2L-209ENST00000397036 LYZL2Q7Z4W2 148 aa11.08□□□□□ -0.64
MCF2L-209ENST00000397036 TCTEX1D2Q8WW35 142 aa11.08□□□□□ -0.64
MCF2L-209ENST00000397036 PCGF1Q9BSM1 259 aa11.08□□□□□ -0.64
MCF2L-209ENST00000397036 RANBP3Q9H6Z4 567 aaPredicted RBP11.08□□□□□ -0.64
MCF2L-209ENST00000397036 PLEKHA2Q9HB19 425 aa11.08□□□□□ -0.64
MCF2L-209ENST00000397036 MMP26Q9NRE1 261 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms