RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 CCDC71LQ8N9Z2 235 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 NINJ1Q92982 152 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 KIRREL1Q96J84 757 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 GAFA1Q96PS6 74 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 GINS3Q9BRX5 216 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 ZNF665Q9H7R5 613 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 SPG11Q96JI7 2443 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 BORCS7-ASMTA0A0B4J1R7 106 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 C9JQL5 133 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 PPIHO43447 177 aaKnown RBP12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 PSPNO60542 156 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 NAPSAO96009 420 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 TFF1P04155 84 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 OR8U9P0C7N5 309 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 PDLIM4P50479 330 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 TMEM155Q4W5P6 130 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 LRRC75A-AS1Q8N1F1 130 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 OR8U1Q8NH10 309 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 MBD6Q96DN6 1003 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 PERPQ96FX8 193 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 KAAG1Q9UBP8 84 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 TMED3Q9Y3Q3 217 aa12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 ANKRD17O75179 2603 aaKnown RBP12.31□□□□□ -0.44
TM9SF1-202ENST00000396854 TRBV6-6A0A0A6YYG2 114 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 NKX6-3A6NJ46 265 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 AADACP22760 399 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 NFYBP25208 207 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 PAX6P26367 422 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 GPR6P46095 362 aaPredicted RBP12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 KCNJ3P48549 501 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 RAB13P51153 203 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 HERV-K104P61576 105 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 HMGN3Q15651 99 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 DEFB113Q30KQ7 82 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 DMBX1Q8NFW5 382 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 BSCL2Q96G97 398 aaPredicted RBP12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 SNX22Q96L94 193 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 WFDC1Q9HC57 220 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 KPTNQ9Y664 436 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 ARID1AO14497 2285 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 DSCAML1Q8TD84 2053 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 NDUFS8O00217 210 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 AGPAT2O15120 278 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 DIRAS3O95661 229 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 SPP1P10451 314 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 HOXA1P49639 335 aaPredicted RBP12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 AVPI1Q5T686 147 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 OR52M1Q8NGK5 317 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 LURAP1Q96LR2 239 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 CCL13Q99616 98 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 FAM234AQ9H0X4 552 aa12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 RIMS4Q9H426 269 aaPredicted RBP12.3□□□□□ -0.44
TM9SF1-202ENST00000396854 ABCA12Q86UK0 2595 aa12.29□□□□□ -0.44
TM9SF1-202ENST00000396854 K7N7A8 449 aa12.29□□□□□ -0.44
TM9SF1-202ENST00000396854 HSPB6O14558 160 aa12.29□□□□□ -0.44
TM9SF1-202ENST00000396854 ST8SIA3O43173 380 aa12.29□□□□□ -0.44
TM9SF1-202ENST00000396854 SNCAP37840 140 aa12.29□□□□□ -0.44
TM9SF1-202ENST00000396854 OR3A1P47881 315 aa12.29□□□□□ -0.44
TM9SF1-202ENST00000396854 SRPXP78539 464 aa12.29□□□□□ -0.44
TM9SF1-202ENST00000396854 PAX5Q02548 391 aa12.29□□□□□ -0.44
TM9SF1-202ENST00000396854 FAM185AQ8N0U4 392 aa12.29□□□□□ -0.44
TM9SF1-202ENST00000396854 OR4D5Q8NGN0 318 aa12.29□□□□□ -0.44
TM9SF1-202ENST00000396854 PPP1R35Q8TAP8 253 aa12.29□□□□□ -0.44
TM9SF1-202ENST00000396854 RXFP4Q8TDU9 374 aa12.29□□□□□ -0.44
TM9SF1-202ENST00000396854 CACFD1Q9UGQ2 172 aa12.29□□□□□ -0.44
TM9SF1-202ENST00000396854 CSMD2Q7Z408 3487 aa12.29□□□□□ -0.44
TM9SF1-202ENST00000396854 MEX3AA1L020 520 aaKnown RBP12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 TMPRSS2O15393 492 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 PHF1O43189 567 aaPredicted RBP12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 TSPAN15O95858 294 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 PPYP01298 95 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 RAB5CP51148 216 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 GAPTQ8N292 157 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 FAM216BQ8N7L0 139 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 ZNRF1Q8ND25 227 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 SCRT1Q9BWW7 348 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 Q9N2K0 584 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 UNC79Q9P2D8 2635 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 MPPED1O15442 326 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 ADAM20O43506 726 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 TK1P04183 234 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 DSCR9P59020 149 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 PEA15Q15121 130 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 MIDNQ504T8 468 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 DUX4L9Q6RFH8 374 aaPredicted RBP12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 CLEC2AQ6UVW9 174 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 LYPD2Q6UXB3 125 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 CLEC9AQ6UXN8 241 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 SLC35G3Q8N808 338 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 NEK7Q8TDX7 302 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 C10orf105Q8TEF2 133 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 FAM168AQ92567 244 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 TP53RKQ96S44 253 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 C11orf1Q9H5F2 150 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 BIN3Q9NQY0 253 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 CTSZQ9UBR2 303 aa12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 RCL1Q9Y2P8 373 aaKnown RBP12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 STRAPQ9Y3F4 350 aaKnown RBP12.28□□□□□ -0.44
TM9SF1-202ENST00000396854 C3orf85A0A1B0GTC6 90 aa12.27□□□□□ -0.45
TM9SF1-202ENST00000396854 COLCA2A8K830 154 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms