RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ZNF488Q96MN9 340 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 MANBALQ9NQG1 85 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 HSPB7Q9UBY9 170 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 LAMP3Q9UQV4 416 aa11.24□□□□□ -0.61
TRIM40-207ENST00000396581 UBE2L5PA0A1B0GUS4 154 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 PMS2P5A8MQ11 134 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 VENTXO95231 258 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 NGFP01138 241 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 IGHV3-9P01782 118 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 MBP02144 154 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 CCL2P13500 99 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 CCNOP22674 350 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 PSMB3P49720 205 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 GNG3P63215 75 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 ZNF497Q6ZNH5 498 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 MISP3Q96FF7 219 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 OR5B12Q96R08 314 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 OR51I2Q9H344 312 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 MBNL3Q9NUK0 354 aaKnown RBP11.23□□□□□ -0.61
TRIM40-207ENST00000396581 SRP14P37108 136 aaKnown RBP11.23□□□□□ -0.61
TRIM40-207ENST00000396581 TNFRSF9Q07011 255 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 P2RY6Q15077 328 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 ACOT6Q3I5F7 207 aaPredicted RBP11.23□□□□□ -0.61
TRIM40-207ENST00000396581 IGF2-ASQ6U949 168 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 FGFRL1Q8N441 504 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 CISD2Q8N5K1 135 aaKnown RBP11.23□□□□□ -0.61
TRIM40-207ENST00000396581 MRPL37Q9BZE1 423 aaKnown RBP11.23□□□□□ -0.61
TRIM40-207ENST00000396581 ASCL3Q9NQ33 180 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 PPP1R3CQ9UQK1 317 aa11.23□□□□□ -0.61
TRIM40-207ENST00000396581 MED13Q9UHV7 2174 aa11.22□□□□□ -0.61
TRIM40-207ENST00000396581 A0A096LPE4 126 aa11.22□□□□□ -0.61
TRIM40-207ENST00000396581 A0A1W2PPZ6 126 aa11.22□□□□□ -0.61
TRIM40-207ENST00000396581 PINLYPA6NC86 204 aa11.22□□□□□ -0.61
TRIM40-207ENST00000396581 TRAPPC6AO75865 159 aa11.22□□□□□ -0.61
TRIM40-207ENST00000396581 ARR3P36575 388 aa11.22□□□□□ -0.61
TRIM40-207ENST00000396581 RAB4BP61018 213 aa11.22□□□□□ -0.61
TRIM40-207ENST00000396581 ERVS71-1P61550 626 aa11.22□□□□□ -0.61
TRIM40-207ENST00000396581 VWC2Q2TAL6 325 aa11.22□□□□□ -0.61
TRIM40-207ENST00000396581 ZNF66Q6ZN08 573 aa11.22□□□□□ -0.61
TRIM40-207ENST00000396581 DRAM1Q8N682 238 aa11.22□□□□□ -0.61
TRIM40-207ENST00000396581 OR1K1Q8NGR3 316 aa11.22□□□□□ -0.61
TRIM40-207ENST00000396581 IL1F10Q8WWZ1 152 aa11.22□□□□□ -0.61
TRIM40-207ENST00000396581 RPUSD4Q96CM3 377 aaKnown RBP11.22□□□□□ -0.61
TRIM40-207ENST00000396581 FER1L6-AS2Q96M78 137 aa11.22□□□□□ -0.61
TRIM40-207ENST00000396581 PCGF1Q9BSM1 259 aa11.22□□□□□ -0.61
TRIM40-207ENST00000396581 WIPI2Q9Y4P8 454 aa11.22□□□□□ -0.61
TRIM40-207ENST00000396581 ANKRD30BLA7E2S9 258 aa11.21□□□□□ -0.61
TRIM40-207ENST00000396581 GDF1P27539 372 aa11.21□□□□□ -0.61
TRIM40-207ENST00000396581 FOXG1P55316 489 aaPredicted RBP11.21□□□□□ -0.61
TRIM40-207ENST00000396581 LCN2P80188 198 aa11.21□□□□□ -0.61
TRIM40-207ENST00000396581 TMEM147Q9BVK8 224 aa11.21□□□□□ -0.61
TRIM40-207ENST00000396581 OR6C3Q9NZP0 311 aa11.21□□□□□ -0.61
TRIM40-207ENST00000396581 RNF212BA8MTL3 300 aa11.21□□□□□ -0.62
TRIM40-207ENST00000396581 J3QT63 122 aa11.21□□□□□ -0.62
TRIM40-207ENST00000396581 MLNRO43193 412 aa11.21□□□□□ -0.62
TRIM40-207ENST00000396581 LILRA1O75019 489 aa11.21□□□□□ -0.62
TRIM40-207ENST00000396581 RHBDL1O75783 438 aa11.21□□□□□ -0.62
TRIM40-207ENST00000396581 NEURL1O76050 574 aa11.21□□□□□ -0.62
TRIM40-207ENST00000396581 CCKARP32238 428 aa11.21□□□□□ -0.62
TRIM40-207ENST00000396581 SPCS3P61009 180 aa11.21□□□□□ -0.62
TRIM40-207ENST00000396581 ERVK11-1P61568 191 aa11.21□□□□□ -0.62
TRIM40-207ENST00000396581 EIF4EBP1Q13541 118 aaPredicted RBP11.21□□□□□ -0.62
TRIM40-207ENST00000396581 TMEM249Q2WGJ8 235 aa11.21□□□□□ -0.62
TRIM40-207ENST00000396581 ABHD17BQ5VST6 288 aa11.21□□□□□ -0.62
TRIM40-207ENST00000396581 NECAP1Q8NC96 275 aa11.21□□□□□ -0.62
TRIM40-207ENST00000396581 ZBTB34Q8NCN2 500 aa11.21□□□□□ -0.62
TRIM40-207ENST00000396581 ELOVL1Q9BW60 279 aa11.21□□□□□ -0.62
TRIM40-207ENST00000396581 A0A1W2PR80 420 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 ZNHIT1O43257 154 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 GYPAP02724 150 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 CD99P14209 185 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 LHX2P50458 406 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 SLC10A1Q14973 349 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 SSX2Q16385 188 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 SPINK14Q6IE38 97 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 OR10G9Q8NGN4 311 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 OR10G7Q8NGN6 311 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 OR2T10Q8NGZ9 312 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 TMEM18Q96B42 140 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 NEU1Q99519 415 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 SLC25A22Q9H936 323 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 CHD3Q12873 2000 aaKnown RBP11.2□□□□□ -0.62
TRIM40-207ENST00000396581 WISP2O76076 250 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 CLDN1O95832 211 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 WNT5AP41221 380 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 RTP5Q14D33 572 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 TMPRSS7Q7RTY8 843 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 TUSC5Q8IXB3 177 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 DIRC2Q96SL1 478 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 ABI3Q9P2A4 366 aa11.2□□□□□ -0.62
TRIM40-207ENST00000396581 A0A1W2PPQ1 181 aa11.19□□□□□ -0.62
TRIM40-207ENST00000396581 LRRC30A6NM36 301 aa11.19□□□□□ -0.62
TRIM40-207ENST00000396581 TMPRSS2O15393 492 aa11.19□□□□□ -0.62
TRIM40-207ENST00000396581 OR2H2O95918 312 aa11.19□□□□□ -0.62
TRIM40-207ENST00000396581 CLDN18P56856 261 aa11.19□□□□□ -0.62
TRIM40-207ENST00000396581 ZNF124Q15973 351 aa11.19□□□□□ -0.62
TRIM40-207ENST00000396581 C9orf135Q5VTT2 229 aa11.19□□□□□ -0.62
TRIM40-207ENST00000396581 OR8G2PQ6IF36 304 aa11.19□□□□□ -0.62
TRIM40-207ENST00000396581 Q8IYB0 196 aa11.19□□□□□ -0.62
TRIM40-207ENST00000396581 OR4F5Q8NH21 305 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms