RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 FAM110AQ9BQ89 295 aa11.69□□□□□ -0.54
CHMP3-202ENST00000393773 C9orf16Q9BUW7 83 aa11.69□□□□□ -0.54
CHMP3-202ENST00000393773 ABRACLQ9P1F3 81 aa11.69□□□□□ -0.54
CHMP3-202ENST00000393773 EXOSC1Q9Y3B2 195 aaKnown RBP11.69□□□□□ -0.54
CHMP3-202ENST00000393773 LRRC42Q9Y546 428 aa11.69□□□□□ -0.54
CHMP3-202ENST00000393773 ANKRD34BA5PLL1 514 aa11.68□□□□□ -0.54
CHMP3-202ENST00000393773 H0Y980 276 aa11.68□□□□□ -0.54
CHMP3-202ENST00000393773 ITGB1BP1O14713 200 aa11.68□□□□□ -0.54
CHMP3-202ENST00000393773 SLC22A1O15245 554 aa11.68□□□□□ -0.54
CHMP3-202ENST00000393773 ATP5HO75947 161 aa11.68□□□□□ -0.54
CHMP3-202ENST00000393773 IGKV1-16P04430 117 aa11.68□□□□□ -0.54
CHMP3-202ENST00000393773 MYL12AP19105 171 aa11.68□□□□□ -0.54
CHMP3-202ENST00000393773 CD40LGP29965 261 aa11.68□□□□□ -0.54
CHMP3-202ENST00000393773 SYNJ2BPP57105 145 aa11.68□□□□□ -0.54
CHMP3-202ENST00000393773 MOGAT2Q3SYC2 334 aa11.68□□□□□ -0.54
CHMP3-202ENST00000393773 ZFP1Q6P2D0 407 aa11.68□□□□□ -0.54
CHMP3-202ENST00000393773 LINC00322Q6ZN03 302 aaPredicted RBP11.68□□□□□ -0.54
CHMP3-202ENST00000393773 C6orf201Q7Z4U5 140 aa11.68□□□□□ -0.54
CHMP3-202ENST00000393773 GTSCR1Q86UQ5 136 aa11.68□□□□□ -0.54
CHMP3-202ENST00000393773 UQCC2Q9BRT2 126 aa11.68□□□□□ -0.54
CHMP3-202ENST00000393773 TMED9Q9BVK6 235 aa11.68□□□□□ -0.54
CHMP3-202ENST00000393773 KRTAP17-1Q9BYP8 105 aa11.68□□□□□ -0.54
CHMP3-202ENST00000393773 HIPK2Q9H2X6 1198 aa11.68□□□□□ -0.54
CHMP3-202ENST00000393773 KMT2AQ03164 3969 aa11.67□□□□□ -0.54
CHMP3-202ENST00000393773 C13orf42A0A1B0GVH6 325 aa11.67□□□□□ -0.54
CHMP3-202ENST00000393773 IZUMO1RA6ND01 250 aa11.67□□□□□ -0.54
CHMP3-202ENST00000393773 PROP1O75360 226 aa11.67□□□□□ -0.54
CHMP3-202ENST00000393773 TRBV12-3P01733 135 aa11.67□□□□□ -0.54
CHMP3-202ENST00000393773 CSN3P07498 182 aa11.67□□□□□ -0.54
CHMP3-202ENST00000393773 LCN12Q6JVE5 192 aa11.67□□□□□ -0.54
CHMP3-202ENST00000393773 MOB1BQ7L9L4 216 aa11.67□□□□□ -0.54
CHMP3-202ENST00000393773 Q8N402 240 aa11.67□□□□□ -0.54
CHMP3-202ENST00000393773 FAAP24Q9BTP7 215 aa11.67□□□□□ -0.54
CHMP3-202ENST00000393773 SIGLEC8Q9NYZ4 499 aa11.67□□□□□ -0.54
CHMP3-202ENST00000393773 OR1A1Q9P1Q5 309 aa11.67□□□□□ -0.54
CHMP3-202ENST00000393773 GHRLQ9UBU3 117 aa11.67□□□□□ -0.54
CHMP3-202ENST00000393773 CEPT1Q9Y6K0 416 aa11.67□□□□□ -0.54
CHMP3-202ENST00000393773 A0A0G2JLM5 398 aa11.66□□□□□ -0.54
CHMP3-202ENST00000393773 PNMA8CA0A1B0GUJ8 204 aa11.66□□□□□ -0.54
CHMP3-202ENST00000393773 IRGMA1A4Y4 181 aa11.66□□□□□ -0.54
CHMP3-202ENST00000393773 BRI3O95415 125 aa11.66□□□□□ -0.54
CHMP3-202ENST00000393773 RPS27AP62979 156 aaKnown RBP11.66□□□□□ -0.54
CHMP3-202ENST00000393773 FXYD3Q14802 87 aa11.66□□□□□ -0.54
CHMP3-202ENST00000393773 OR10K2Q6IF99 312 aa11.66□□□□□ -0.54
CHMP3-202ENST00000393773 ZNF383Q8NA42 475 aa11.66□□□□□ -0.54
CHMP3-202ENST00000393773 DRAXINQ8NBI3 349 aaPredicted RBP11.66□□□□□ -0.54
CHMP3-202ENST00000393773 NEDD4LQ96PU5 975 aa11.66□□□□□ -0.54
CHMP3-202ENST00000393773 TSNAXQ99598 290 aaKnown RBP11.66□□□□□ -0.54
CHMP3-202ENST00000393773 NICN1Q9BSH3 213 aa11.66□□□□□ -0.54
CHMP3-202ENST00000393773 C11orf54Q9H0W9 315 aaPredicted RBP11.66□□□□□ -0.54
CHMP3-202ENST00000393773 KCNK15Q9H427 330 aa11.66□□□□□ -0.54
CHMP3-202ENST00000393773 TUBA4BQ9H853 241 aa11.66□□□□□ -0.54
CHMP3-202ENST00000393773 PLEKHA3Q9HB20 300 aa11.66□□□□□ -0.54
CHMP3-202ENST00000393773 ZNF355PQ9NSJ1 428 aa11.66□□□□□ -0.54
CHMP3-202ENST00000393773 DNAH10Q8IVF4 4471 aa11.66□□□□□ -0.54
CHMP3-202ENST00000393773 SHISA3A0PJX4 238 aa11.65□□□□□ -0.54
CHMP3-202ENST00000393773 DYNC1I1O14576 645 aa11.65□□□□□ -0.54
CHMP3-202ENST00000393773 SLC25A17O43808 307 aa11.65□□□□□ -0.54
CHMP3-202ENST00000393773 CPEP16870 476 aa11.65□□□□□ -0.54
CHMP3-202ENST00000393773 LINC00205P59089 165 aa11.65□□□□□ -0.54
CHMP3-202ENST00000393773 HLA-DRB3P79483 266 aa11.65□□□□□ -0.54
CHMP3-202ENST00000393773 UNC119Q13432 240 aa11.65□□□□□ -0.54
CHMP3-202ENST00000393773 DYRK1AQ13627 763 aa11.65□□□□□ -0.54
CHMP3-202ENST00000393773 ZNF343Q6P1L6 599 aa11.65□□□□□ -0.54
CHMP3-202ENST00000393773 PDPNQ86YL7 162 aa11.65□□□□□ -0.54
CHMP3-202ENST00000393773 OR5T1Q8NG75 326 aa11.65□□□□□ -0.54
CHMP3-202ENST00000393773 IL17DQ8TAD2 202 aa11.65□□□□□ -0.54
CHMP3-202ENST00000393773 TMEM59Q9BXS4 323 aa11.65□□□□□ -0.54
CHMP3-202ENST00000393773 TINAGL1Q9GZM7 467 aaPredicted RBP11.65□□□□□ -0.54
CHMP3-202ENST00000393773 PCLOQ9Y6V0 5065 aa11.65□□□□□ -0.54
CHMP3-202ENST00000393773 TRBV6-6A0A0A6YYG2 114 aa11.64□□□□□ -0.55
CHMP3-202ENST00000393773 RBMXL2O75526 392 aaKnown RBP11.64□□□□□ -0.55
CHMP3-202ENST00000393773 OR2A4O95047 310 aa11.64□□□□□ -0.55
CHMP3-202ENST00000393773 IGLV2-23P01705 113 aa11.64□□□□□ -0.55
CHMP3-202ENST00000393773 UBBP0CG47 229 aa11.64□□□□□ -0.55
CHMP3-202ENST00000393773 HTR2CP28335 458 aa11.64□□□□□ -0.55
CHMP3-202ENST00000393773 MECP2P51608 486 aaKnown RBP11.64□□□□□ -0.55
CHMP3-202ENST00000393773 TAS2R43P59537 309 aa11.64□□□□□ -0.55
CHMP3-202ENST00000393773 PJVKQ0ZLH3 352 aa11.64□□□□□ -0.55
CHMP3-202ENST00000393773 EDARADDQ8WWZ3 215 aa11.64□□□□□ -0.55
CHMP3-202ENST00000393773 TMEM80Q96HE8 168 aa11.64□□□□□ -0.55
CHMP3-202ENST00000393773 TM2D1Q9BX74 207 aa11.64□□□□□ -0.55
CHMP3-202ENST00000393773 CHMP1AQ9HD42 196 aaPredicted RBP11.64□□□□□ -0.55
CHMP3-202ENST00000393773 PEF1Q9UBV8 284 aaKnown RBP11.64□□□□□ -0.55
CHMP3-202ENST00000393773 HECTD4Q9Y4D8 3996 aa11.64□□□□□ -0.55
CHMP3-202ENST00000393773 A0A0A6YYD4 124 aa11.63□□□□□ -0.55
CHMP3-202ENST00000393773 CRYGBP07316 175 aa11.63□□□□□ -0.55
CHMP3-202ENST00000393773 AADACP22760 399 aa11.63□□□□□ -0.55
CHMP3-202ENST00000393773 CD81P60033 236 aa11.63□□□□□ -0.55
CHMP3-202ENST00000393773 RPS16P62249 146 aaKnown RBP11.63□□□□□ -0.55
CHMP3-202ENST00000393773 BVESQ8NE79 360 aa11.63□□□□□ -0.55
CHMP3-202ENST00000393773 OR2K2Q8NGT1 345 aa11.63□□□□□ -0.55
CHMP3-202ENST00000393773 SETD6Q8TBK2 473 aa11.63□□□□□ -0.55
CHMP3-202ENST00000393773 PTX4Q96A99 478 aa11.63□□□□□ -0.55
CHMP3-202ENST00000393773 HDHD3Q9BSH5 251 aaPredicted RBP11.63□□□□□ -0.55
CHMP3-202ENST00000393773 WFDC10AQ9H1F0 79 aa11.63□□□□□ -0.55
CHMP3-202ENST00000393773 SMPD3Q9NY59 655 aaPredicted RBP11.63□□□□□ -0.55
CHMP3-202ENST00000393773 FAM53CQ9NYF3 392 aa11.63□□□□□ -0.55
CHMP3-202ENST00000393773 APOA2P02652 100 aa11.62□□□□□ -0.55
CHMP3-202ENST00000393773 CD1AP06126 327 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms