RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 ZNF221Q9UK13 617 aa10.67□□□□□ -0.7
USP44-202ENST00000393091 TBC1D24Q9ULP9 559 aa10.67□□□□□ -0.7
USP44-202ENST00000393091 A6NDX4 124 aa10.67□□□□□ -0.7
USP44-202ENST00000393091 INAFM1C9JVW0 142 aa10.67□□□□□ -0.7
USP44-202ENST00000393091 COX7A1P24310 79 aa10.67□□□□□ -0.7
USP44-202ENST00000393091 DUTP33316 252 aaKnown RBP10.67□□□□□ -0.7
USP44-202ENST00000393091 LGALS4P56470 323 aa10.67□□□□□ -0.7
USP44-202ENST00000393091 TRIQKQ629K1 86 aa10.67□□□□□ -0.7
USP44-202ENST00000393091 PRR18Q8N4B5 295 aa10.67□□□□□ -0.7
USP44-202ENST00000393091 DRAM1Q8N682 238 aa10.67□□□□□ -0.7
USP44-202ENST00000393091 NPBQ8NG41 125 aa10.67□□□□□ -0.7
USP44-202ENST00000393091 MS4A7Q9GZW8 240 aaPredicted RBP10.67□□□□□ -0.7
USP44-202ENST00000393091 SCP2D1Q9UJQ7 156 aa10.67□□□□□ -0.7
USP44-202ENST00000393091 HSPA12AO43301 675 aa10.67□□□□□ -0.7
USP44-202ENST00000393091 DEFB112Q30KQ8 113 aa10.67□□□□□ -0.7
USP44-202ENST00000393091 PDPNQ86YL7 162 aa10.67□□□□□ -0.7
USP44-202ENST00000393091 LEAP2Q969E1 77 aa10.67□□□□□ -0.7
USP44-202ENST00000393091 ALX4Q9H161 411 aaPredicted RBP10.67□□□□□ -0.7
USP44-202ENST00000393091 COPZ2Q9P299 210 aa10.67□□□□□ -0.7
USP44-202ENST00000393091 ST8SIA5O15466 376 aa10.66□□□□□ -0.7
USP44-202ENST00000393091 SLC6A1P30531 599 aa10.66□□□□□ -0.7
USP44-202ENST00000393091 GPR12P47775 334 aa10.66□□□□□ -0.7
USP44-202ENST00000393091 DLX1P56177 255 aa10.66□□□□□ -0.7
USP44-202ENST00000393091 IFITM3Q01628 133 aa10.66□□□□□ -0.7
USP44-202ENST00000393091 POU2AF1Q16633 256 aa10.66□□□□□ -0.7
USP44-202ENST00000393091 DUSP18Q8NEJ0 188 aa10.66□□□□□ -0.7
USP44-202ENST00000393091 TOMM40LQ969M1 308 aa10.66□□□□□ -0.7
USP44-202ENST00000393091 JMJD8Q96S16 334 aa10.66□□□□□ -0.7
USP44-202ENST00000393091 H0YJW9 148 aa10.66□□□□□ -0.7
USP44-202ENST00000393091 GPR31O00270 319 aa10.66□□□□□ -0.7
USP44-202ENST00000393091 IL6RP08887 468 aaPredicted RBP10.66□□□□□ -0.7
USP44-202ENST00000393091 NFYAP23511 347 aaPredicted RBP10.66□□□□□ -0.7
USP44-202ENST00000393091 TMEM177Q53S58 311 aa10.66□□□□□ -0.7
USP44-202ENST00000393091 SSMEM1Q8WWF3 244 aa10.66□□□□□ -0.7
USP44-202ENST00000393091 OR2D2Q9H210 308 aa10.66□□□□□ -0.7
USP44-202ENST00000393091 DPAGT1Q9H3H5 408 aa10.66□□□□□ -0.7
USP44-202ENST00000393091 FAM172BPA6NC97 362 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 M0QYG6 137 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 NDUFB6O95139 128 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 SPDEFO95238 335 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 RNASE1P07998 156 aaKnown RBP10.65□□□□□ -0.7
USP44-202ENST00000393091 BRS3P32247 399 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 SRP14P37108 136 aaKnown RBP10.65□□□□□ -0.7
USP44-202ENST00000393091 GNG10P50151 68 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 RAG2P55895 527 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 BCL6BQ8N143 479 aaPredicted RBP10.65□□□□□ -0.7
USP44-202ENST00000393091 Q8N2B8 174 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 C17orf50Q8WW18 174 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 RPEQ96AT9 228 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 ABHD14BQ96IU4 210 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 RTBDNQ9BSG5 229 aaPredicted RBP10.65□□□□□ -0.7
USP44-202ENST00000393091 RNF212BA8MTL3 300 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 NDUFA3O95167 84 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 IFNA6P05013 189 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 HERV-K104P61576 105 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 ZNF818PQ6ZRF7 136 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 TGIF2LXQ8IUE1 241 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 UBALD1Q8TB05 177 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 CREBBPQ92793 2442 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 TSC22D3Q99576 134 aa10.65□□□□□ -0.7
USP44-202ENST00000393091 AMY2AP04746 511 aa10.65□□□□□ -0.71
USP44-202ENST00000393091 BRD3OSQ6XYD6 125 aa10.65□□□□□ -0.71
USP44-202ENST00000393091 LYG1Q8N1E2 194 aa10.65□□□□□ -0.71
USP44-202ENST00000393091 RANBP3Q9H6Z4 567 aaPredicted RBP10.65□□□□□ -0.71
USP44-202ENST00000393091 TCF19Q9Y242 345 aa10.65□□□□□ -0.71
USP44-202ENST00000393091 RAB13P51153 203 aa10.64□□□□□ -0.71
USP44-202ENST00000393091 BRWD1-AS2P59051 145 aa10.64□□□□□ -0.71
USP44-202ENST00000393091 RBMS2Q15434 407 aaKnown RBP10.64□□□□□ -0.71
USP44-202ENST00000393091 ZNF383Q8NA42 475 aa10.64□□□□□ -0.71
USP44-202ENST00000393091 OR56B4Q8NH76 319 aa10.64□□□□□ -0.71
USP44-202ENST00000393091 CD300LFQ8TDQ1 290 aa10.64□□□□□ -0.71
USP44-202ENST00000393091 GALNT14Q96FL9 552 aa10.64□□□□□ -0.71
USP44-202ENST00000393091 ABCA1O95477 2261 aa10.64□□□□□ -0.71
USP44-202ENST00000393091 NSD1Q96L73 2696 aaPredicted RBP10.64□□□□□ -0.71
USP44-202ENST00000393091 MEX3AA1L020 520 aaKnown RBP10.64□□□□□ -0.71
USP44-202ENST00000393091 CENPXA8MT69 81 aa10.64□□□□□ -0.71
USP44-202ENST00000393091 LYRM1O43325 122 aa10.64□□□□□ -0.71
USP44-202ENST00000393091 PGLYRP1O75594 196 aaPredicted RBP10.64□□□□□ -0.71
USP44-202ENST00000393091 VENTXO95231 258 aa10.64□□□□□ -0.71
USP44-202ENST00000393091 CRYGBP07316 175 aa10.64□□□□□ -0.71
USP44-202ENST00000393091 OR8U9P0C7N5 309 aa10.64□□□□□ -0.71
USP44-202ENST00000393091 OR51S1Q8NGJ8 323 aa10.64□□□□□ -0.71
USP44-202ENST00000393091 OR8U1Q8NH10 309 aa10.64□□□□□ -0.71
USP44-202ENST00000393091 RBM14Q96PK6 669 aaKnown RBP10.64□□□□□ -0.71
USP44-202ENST00000393091 SLC5A7Q9GZV3 580 aa10.64□□□□□ -0.71
USP44-202ENST00000393091 FGF16O43320 207 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 OR2F2O95006 317 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 DIAPH2-AS1Q14236 149 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 LTC4SQ16873 150 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 MRPL20Q9BYC9 149 aaKnown RBP10.63□□□□□ -0.71
USP44-202ENST00000393091 CCL28Q9NRJ3 127 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 VPREB3Q9UKI3 123 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 RAB18Q9NP72 206 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 PLSCR3Q9NRY6 295 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 COMMD9Q9P000 198 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 WASHC3Q9Y3C0 194 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 PIGBOS1A0A0B4J2F0 54 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 CRYM-AS1A6NIL9 109 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 M0QZK8 103 aa10.63□□□□□ -0.71
USP44-202ENST00000393091 RPA2P15927 270 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms