RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 A0A1W2PPE2 198 aa21.93■■□□□ 1.1
MSX1-201ENST00000382723 A0A1W2PR64 198 aa21.93■■□□□ 1.1
MSX1-201ENST00000382723 A0A1W2PRV1 198 aa21.93■■□□□ 1.1
MSX1-201ENST00000382723 RAP2BP61225 183 aa21.93■■□□□ 1.1
MSX1-201ENST00000382723 SRPXP78539 464 aa21.93■■□□□ 1.1
MSX1-201ENST00000382723 ABHD12Q8N2K0 398 aa21.93■■□□□ 1.1
MSX1-201ENST00000382723 SLC35G3Q8N808 338 aa21.93■■□□□ 1.1
MSX1-201ENST00000382723 TMEM56Q96MV1 263 aa21.93■■□□□ 1.1
MSX1-201ENST00000382723 TMEM56-RWDD3S4R434 201 aa21.93■■□□□ 1.1
MSX1-201ENST00000382723 LINC00473A8K010 186 aa21.92■■□□□ 1.1
MSX1-201ENST00000382723 CATR1Q13166 79 aa21.92■■□□□ 1.1
MSX1-201ENST00000382723 Q5BKY6 102 aa21.92■■□□□ 1.1
MSX1-201ENST00000382723 GGNBP1Q5YKI7 109 aa21.92■■□□□ 1.1
MSX1-201ENST00000382723 ZNF66Q6ZN08 573 aa21.92■■□□□ 1.1
MSX1-201ENST00000382723 SELENOHQ8IZQ5 122 aaKnown RBP21.92■■□□□ 1.1
MSX1-201ENST00000382723 HSD17B10Q99714 261 aaKnown RBP21.92■■□□□ 1.1
MSX1-201ENST00000382723 J3QR06 171 aa21.92■■□□□ 1.1
MSX1-201ENST00000382723 CDS2O95674 445 aa21.92■■□□□ 1.1
MSX1-201ENST00000382723 RBP4P02753 201 aa21.92■■□□□ 1.1
MSX1-201ENST00000382723 DNASE1P24855 282 aa21.92■■□□□ 1.1
MSX1-201ENST00000382723 DSCR9P59020 149 aa21.92■■□□□ 1.1
MSX1-201ENST00000382723 CLEC12BQ2HXU8 276 aa21.92■■□□□ 1.1
MSX1-201ENST00000382723 OR10C1Q96KK4 312 aa21.92■■□□□ 1.1
MSX1-201ENST00000382723 DOCK11Q5JSL3 2073 aa21.91■■□□□ 1.1
MSX1-201ENST00000382723 A0A087X0M5 115 aa21.91■■□□□ 1.1
MSX1-201ENST00000382723 A0A1B0GX30 115 aa21.91■■□□□ 1.1
MSX1-201ENST00000382723 B3GALNT1O75752 331 aa21.91■■□□□ 1.1
MSX1-201ENST00000382723 IFNA21P01568 189 aa21.91■■□□□ 1.1
MSX1-201ENST00000382723 DUTP33316 252 aaKnown RBP21.91■■□□□ 1.1
MSX1-201ENST00000382723 Q8N7P7 452 aa21.91■■□□□ 1.1
MSX1-201ENST00000382723 OR10X1Q8NGY0 326 aa21.91■■□□□ 1.1
MSX1-201ENST00000382723 LPAR2Q9HBW0 351 aa21.91■■□□□ 1.1
MSX1-201ENST00000382723 ARID1AO14497 2285 aa21.91■■□□□ 1.1
MSX1-201ENST00000382723 ASH1LQ9NR48 2969 aaKnown RBP21.91■■□□□ 1.1
MSX1-201ENST00000382723 ENSAO43768 121 aaKnown RBP21.9■■□□□ 1.1
MSX1-201ENST00000382723 OR9G1Q8NH87 305 aa21.9■■□□□ 1.1
MSX1-201ENST00000382723 GAB2Q9UQC2 676 aa21.9■■□□□ 1.1
MSX1-201ENST00000382723 CSMD2Q7Z408 3487 aa21.9■■□□□ 1.1
MSX1-201ENST00000382723 RAMP3O60896 148 aa21.9■■□□□ 1.1
MSX1-201ENST00000382723 C1QBP02746 253 aa21.9■■□□□ 1.1
MSX1-201ENST00000382723 COX7A1P24310 79 aa21.9■■□□□ 1.1
MSX1-201ENST00000382723 DEFB113Q30KQ7 82 aa21.9■■□□□ 1.1
MSX1-201ENST00000382723 ZNF585BQ52M93 769 aa21.9■■□□□ 1.1
MSX1-201ENST00000382723 ZNF436-AS1Q8NC38 126 aaPredicted RBP21.9■■□□□ 1.1
MSX1-201ENST00000382723 RBPMSQ93062 196 aaKnown RBP21.9■■□□□ 1.1
MSX1-201ENST00000382723 ZNF251Q9BRH9 671 aa21.9■■□□□ 1.1
MSX1-201ENST00000382723 SIRT7Q9NRC8 400 aa21.9■■□□□ 1.1
MSX1-201ENST00000382723 MMP26Q9NRE1 261 aa21.9■■□□□ 1.1
MSX1-201ENST00000382723 GCN1Q92616 2671 aaKnown RBP21.9■■□□□ 1.1
MSX1-201ENST00000382723 IGHV2-26A0A0B4J1V2 119 aa21.89■■□□□ 1.09
MSX1-201ENST00000382723 A8MXK9 166 aa21.89■■□□□ 1.09
MSX1-201ENST00000382723 FAM157AC9JC47 383 aa21.89■■□□□ 1.09
MSX1-201ENST00000382723 TOR1AO14656 332 aa21.89■■□□□ 1.09
MSX1-201ENST00000382723 NCR3LG1Q68D85 454 aa21.89■■□□□ 1.09
MSX1-201ENST00000382723 NOXA1Q86UR1 476 aa21.89■■□□□ 1.09
MSX1-201ENST00000382723 SPAG16Q8N0X2 631 aa21.89■■□□□ 1.09
MSX1-201ENST00000382723 BEX4Q9NWD9 120 aaPredicted RBP21.89■■□□□ 1.09
MSX1-201ENST00000382723 GSKIPQ9P0R6 139 aa21.89■■□□□ 1.09
MSX1-201ENST00000382723 M0R1W7 72 aa21.88■■□□□ 1.09
MSX1-201ENST00000382723 ZNF816Q0VGE8 651 aaPredicted RBP21.88■■□□□ 1.09
MSX1-201ENST00000382723 C8orf31Q8N9H6 132 aa21.88■■□□□ 1.09
MSX1-201ENST00000382723 S1PR3Q99500 378 aa21.88■■□□□ 1.09
MSX1-201ENST00000382723 PTPN13Q12923 2485 aa21.88■■□□□ 1.09
MSX1-201ENST00000382723 G3V3Q6 166 aa21.88■■□□□ 1.09
MSX1-201ENST00000382723 FOXH1O75593 365 aa21.88■■□□□ 1.09
MSX1-201ENST00000382723 LPAR6P43657 344 aa21.88■■□□□ 1.09
MSX1-201ENST00000382723 BRWD1-AS2P59051 145 aa21.88■■□□□ 1.09
MSX1-201ENST00000382723 PAX2Q02962 417 aa21.88■■□□□ 1.09
MSX1-201ENST00000382723 SRSF4Q08170 494 aaKnown RBP21.88■■□□□ 1.09
MSX1-201ENST00000382723 IAH1Q2TAA2 248 aaPredicted RBP21.88■■□□□ 1.09
MSX1-201ENST00000382723 LRRC37A5PQ49AS3 106 aa21.88■■□□□ 1.09
MSX1-201ENST00000382723 VPS13CQ709C8 3753 aa21.88■■□□□ 1.09
MSX1-201ENST00000382723 IGHV2-70DA0A0C4DH43 119 aa21.87■■□□□ 1.09
MSX1-201ENST00000382723 IGKV1-39P01597 117 aa21.87■■□□□ 1.09
MSX1-201ENST00000382723 IGKV1D-39P04432 117 aa21.87■■□□□ 1.09
MSX1-201ENST00000382723 LINC00311Q8N616 119 aa21.87■■□□□ 1.09
MSX1-201ENST00000382723 ZNF596Q8TC21 504 aa21.87■■□□□ 1.09
MSX1-201ENST00000382723 ASB13Q8WXK3 278 aa21.87■■□□□ 1.09
MSX1-201ENST00000382723 CLEC7AQ9BXN2 247 aa21.87■■□□□ 1.09
MSX1-201ENST00000382723 TMED3Q9Y3Q3 217 aa21.87■■□□□ 1.09
MSX1-201ENST00000382723 POLQO75417 2590 aa21.86■■□□□ 1.09
MSX1-201ENST00000382723 PNKDQ8N490 385 aa21.86■■□□□ 1.09
MSX1-201ENST00000382723 IL22RA2Q969J5 263 aa21.86■■□□□ 1.09
MSX1-201ENST00000382723 C2orf50Q96LR7 162 aa21.86■■□□□ 1.09
MSX1-201ENST00000382723 RANBP3Q9H6Z4 567 aaPredicted RBP21.86■■□□□ 1.09
MSX1-201ENST00000382723 ARHGAP32A7KAX9 2087 aa21.86■■□□□ 1.09
MSX1-201ENST00000382723 FAM219AQ8IW50 185 aa21.86■■□□□ 1.09
MSX1-201ENST00000382723 OR11H4Q8NGC9 324 aa21.86■■□□□ 1.09
MSX1-201ENST00000382723 FCGR3BO75015 233 aa21.85■■□□□ 1.09
MSX1-201ENST00000382723 GZMKP49863 264 aa21.85■■□□□ 1.09
MSX1-201ENST00000382723 PRRX1P54821 245 aa21.85■■□□□ 1.09
MSX1-201ENST00000382723 PPP1R1CQ8WVI7 109 aa21.85■■□□□ 1.09
MSX1-201ENST00000382723 NMES1Q9C002 83 aa21.85■■□□□ 1.09
MSX1-201ENST00000382723 NBPF19A0A087WUL8 3843 aa21.85■■□□□ 1.09
MSX1-201ENST00000382723 REG1BP48304 166 aa21.84■■□□□ 1.09
MSX1-201ENST00000382723 CYCSP99999 105 aaKnown RBP21.84■■□□□ 1.09
MSX1-201ENST00000382723 ZNF833PQ6ZTB9 187 aa21.84■■□□□ 1.09
MSX1-201ENST00000382723 KIR3DL3Q8N743 410 aa21.84■■□□□ 1.09
MSX1-201ENST00000382723 RNASE11Q8TAA1 199 aaKnown RBP21.84■■□□□ 1.09
MSX1-201ENST00000382723 COMMD9Q9P000 198 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms