RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 PMP22Q01453 160 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 CXorf67Q86X51 503 aaPredicted RBP15.24■□□□□ 0.03
TDP2-202ENST00000378198 RPP25LQ8N5L8 163 aaKnown RBP15.24■□□□□ 0.03
TDP2-202ENST00000378198 COQ2Q96H96 371 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 FAM210BQ96KR6 192 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 CIB3Q96Q77 187 aaPredicted RBP15.24■□□□□ 0.03
TDP2-202ENST00000378198 TRIB1Q96RU8 372 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 MRPL37Q9BZE1 423 aaKnown RBP15.24■□□□□ 0.03
TDP2-202ENST00000378198 LAMP3Q9UQV4 416 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 HIST1H2BKO60814 126 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 S1PR2O95136 353 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 CLDN14O95500 239 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 IGKV3-15P01624 115 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 HIST1H2BJP06899 126 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 HIST1H2BOP23527 126 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 HIST1H2BBP33778 126 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 HIST1H2BDP58876 126 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 HIST1H2BCP62807 126 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 GUSBP1Q15486 140 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 HIST2H2BEQ16778 126 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 OR2B11Q5JQS5 317 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.24■□□□□ 0.03
TDP2-202ENST00000378198 WDR25Q64LD2 544 aaPredicted RBP15.24■□□□□ 0.03
TDP2-202ENST00000378198 OR10P1Q8NGE3 313 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 HIST1H2BHQ93079 126 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 LURAP1Q96LR2 239 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 TAAR6Q96RI8 345 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 HIST1H2BNQ99877 126 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 HIST1H2BMQ99879 126 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 AGMATQ9BSE5 352 aa15.24■□□□□ 0.03
TDP2-202ENST00000378198 PMS2P5A8MQ11 134 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 C17orf98A8MV24 154 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 IGKV1D-33P01593 117 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 IGKV1-33P01594 117 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 TRGC2P03986 189 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 S100A2P29034 98 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 GABRA2P47869 451 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 ZNF66Q6ZN08 573 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 DTD1Q8TEA8 209 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 CLN8Q9UBY8 286 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 NAT8Q9UHE5 227 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 CTXND1A0A1B0GTU2 59 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 SEC14L6B5MCN3 397 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 IFNL4K9M1U5 179 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 M0R296 226 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 OPN1MWP04001 364 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 OPN1MW2P0DN77 364 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 OPN1MW3P0DN78 364 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 BRWD1-AS2P59051 145 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 MEF2BQ02080 365 aaPredicted RBP15.23■□□□□ 0.03
TDP2-202ENST00000378198 ACSM6Q6P461 480 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 WDR82Q6UXN9 313 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 BEND4Q6ZU67 534 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 C1orf162Q8NEQ5 155 aaPredicted RBP15.23■□□□□ 0.03
TDP2-202ENST00000378198 MRGPRDQ8TDS7 321 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 GGACTQ9BVM4 153 aa15.23■□□□□ 0.03
TDP2-202ENST00000378198 GAR1Q9NY12 217 aaKnown RBP15.23■□□□□ 0.03
TDP2-202ENST00000378198 TRBV24-1A0A075B6N3 115 aa15.22■□□□□ 0.03
TDP2-202ENST00000378198 ELOA3CA0A087WX78 387 aaPredicted RBP15.22■□□□□ 0.03
TDP2-202ENST00000378198 NDUFS6O75380 124 aaKnown RBP15.22■□□□□ 0.03
TDP2-202ENST00000378198 CD55P08174 381 aa15.22■□□□□ 0.03
TDP2-202ENST00000378198 KITLGP21583 273 aa15.22■□□□□ 0.03
TDP2-202ENST00000378198 H2BFWTQ7Z2G1 175 aa15.22■□□□□ 0.03
TDP2-202ENST00000378198 WDR31Q8NA23 367 aa15.22■□□□□ 0.03
TDP2-202ENST00000378198 GTF3C1Q12789 2109 aa15.22■□□□□ 0.03
TDP2-202ENST00000378198 PTPRBP23467 1997 aa15.22■□□□□ 0.03
TDP2-202ENST00000378198 IFITM10A6NMD0 228 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 TIMM8AO60220 97 aaPredicted RBP15.21■□□□□ 0.03
TDP2-202ENST00000378198 ZG16O60844 167 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 AGFG2O95081 481 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 COX5AP20674 150 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 FGF7P21781 194 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 PSMB3P49720 205 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 CD81P60033 236 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 NKX6-1P78426 367 aaPredicted RBP15.21■□□□□ 0.03
TDP2-202ENST00000378198 FAM53AQ6NSI3 398 aaPredicted RBP15.21■□□□□ 0.03
TDP2-202ENST00000378198 Q6ZR03 302 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 CNEP1R1Q8N9A8 125 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 OR10G9Q8NGN4 311 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 OR10G7Q8NGN6 311 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 HSD17B10Q99714 261 aaKnown RBP15.21■□□□□ 0.03
TDP2-202ENST00000378198 WASF3Q9UPY6 502 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 ZDBF2Q9HCK1 2354 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 TMEM250H0YL14 139 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 COL10A1Q03692 680 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 SMIM21Q3B7S5 101 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 PRAMEF6Q5VXH4 476 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 TRAT1Q6PIZ9 186 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 BTNL3Q6UXE8 466 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 SPNS3Q6ZMD2 512 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 CYP2G1PQ6ZSU1 146 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 SMIM7Q9BQ49 75 aa15.21■□□□□ 0.03
TDP2-202ENST00000378198 DIDO1Q9BTC0 2240 aaKnown RBP15.2■□□□□ 0.02
TDP2-202ENST00000378198 OR5H1A6NKK0 313 aa15.2■□□□□ 0.02
TDP2-202ENST00000378198 PTBP3O95758 552 aaKnown RBP15.2■□□□□ 0.02
TDP2-202ENST00000378198 TMEM241Q24JQ0 296 aa15.2■□□□□ 0.02
TDP2-202ENST00000378198 VWC2Q2TAL6 325 aa15.2■□□□□ 0.02
TDP2-202ENST00000378198 ACTR3CQ9C0K3 210 aaPredicted RBP15.2■□□□□ 0.02
TDP2-202ENST00000378198 KBTBD11O94819 623 aa15.2■□□□□ 0.02
TDP2-202ENST00000378198 IGHV2-70P01814 119 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms