RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 G6PCP35575 357 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 RPL27P61353 136 aaKnown RBP6.68□□□□□ -1.34
USP48-203ENST00000374732 KLRB1Q12918 225 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 GSG1Q2KHT4 349 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 LCN8Q6JVE9 175 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 FOXI2Q6ZQN5 318 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 TEX29Q8N6K0 151 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 OR10G6Q8NH81 332 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 Q8TCH9 128 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 SDF2Q99470 211 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 SFXN3Q9BWM7 321 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 SLC17A9Q9BYT1 436 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 DUSP21Q9H596 190 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 TMEM9BQ9NQ34 198 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 TPSG1Q9NRR2 321 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 HEBP1Q9NRV9 189 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 DNAH12Q6ZR08 3092 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 MUC21A0A0G2JKD1 596 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 OR1I1O60431 355 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 ZNF354AO60765 605 aaPredicted RBP6.68□□□□□ -1.34
USP48-203ENST00000374732 IGLC6P0CF74 106 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 IRF1P10914 325 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 DIO3P55073 304 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 CCL23P55773 120 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 TGFBR3Q03167 851 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 SLC38A11Q08AI6 406 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 SBSNQ6UWP8 590 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 TMEM184AQ6ZMB5 413 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 HOGA1Q86XE5 327 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 SLAMF6Q96DU3 332 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 RPP25Q9BUL9 199 aaKnown RBP6.68□□□□□ -1.34
USP48-203ENST00000374732 LRRC61Q9BV99 259 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 TM2D2Q9BX73 214 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 DPY30Q9C005 99 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 PRORYQ9H606 182 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 KCNE5Q9UJ90 142 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 NSG2Q9Y328 171 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 OARD1Q9Y530 152 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 BORCS7-ASMTA0A0B4J1R7 106 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 M0R082 166 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 FXYD1O00168 92 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 SPINT2O43291 252 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 LINC00032P0C843 101 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 IGLC2P0DOY2 106 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 IGLC3P0DOY3 106 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 TSPOP30536 169 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 CDAP32320 146 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 LHX2P50458 406 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 ELOBQ15370 118 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 PRSS36Q5K4E3 855 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 SYT8Q8NBV8 401 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 GJC3Q8NFK1 279 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 OR4B1Q8NGF8 309 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 CNIH3Q8TBE1 160 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 OR4C12Q96R67 309 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 ZNF471Q9BX82 626 aaPredicted RBP6.68□□□□□ -1.34
USP48-203ENST00000374732 BPIFA1Q9NP55 256 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 DUSP13Q9UII6 198 aa6.68□□□□□ -1.34
USP48-203ENST00000374732 COA3Q9Y2R0 106 aaPredicted RBP6.68□□□□□ -1.34
USP48-203ENST00000374732 MYO10Q9HD67 2058 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 TRBV20-1A0A075B6N2 111 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 A0A1B0GX51 115 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 FNDC10F2Z333 226 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 NME4O00746 187 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 NPFFO15130 113 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 HPXP02790 462 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 PRDX3P30048 256 aaKnown RBP6.67□□□□□ -1.34
USP48-203ENST00000374732 COA6Q5JTJ3 125 aaKnown RBP6.67□□□□□ -1.34
USP48-203ENST00000374732 C20orf196Q8IYI0 205 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 SLC22A18ASQ8N1D0 253 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 RNF175Q8N4F7 328 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 OR13H1Q8NG92 308 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 ZMYND19Q96E35 227 aaPredicted RBP6.67□□□□□ -1.34
USP48-203ENST00000374732 TMEM121BQ9BXQ6 578 aaPredicted RBP6.67□□□□□ -1.34
USP48-203ENST00000374732 WDR61Q9GZS3 305 aaKnown RBP6.67□□□□□ -1.34
USP48-203ENST00000374732 ASIC5Q9NY37 505 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 HELZP42694 1942 aaKnown RBP6.67□□□□□ -1.34
USP48-203ENST00000374732 TRGV10A0A0A0MS01 117 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 A0A0J9YW62 118 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 KANTRA0A1W2PQU2 76 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 TMEM212A6NML5 194 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 C9JQL5 133 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 BCL2L11O43521 198 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 POLR2JP52435 117 aaKnown RBP6.67□□□□□ -1.34
USP48-203ENST00000374732 ISL1P61371 349 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 FAM53BQ14153 422 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 Q71RC1 249 aaPredicted RBP6.67□□□□□ -1.34
USP48-203ENST00000374732 PPP1R27Q86WC6 154 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 POP5Q969H6 163 aaKnown RBP6.67□□□□□ -1.34
USP48-203ENST00000374732 TMEM125Q96AQ2 219 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 DERL3Q96Q80 235 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 TMEM222Q9H0R3 208 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 KCNJ16Q9NPI9 418 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 CKAP5Q14008 2032 aa6.67□□□□□ -1.34
USP48-203ENST00000374732 A0A1B0GTL3 188 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 USP17L23D6RBM5 183 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 ADMP35318 185 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 FNDC7Q5VTL7 733 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 DHRS13Q6UX07 377 aa6.66□□□□□ -1.34
USP48-203ENST00000374732 GATD1Q8NB37 220 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms