RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 HSD17B10Q99714 261 aaKnown RBP13.96□□□□□ -0.18
PTPN20-203ENST00000374342 ABHD14AQ9BUJ0 271 aa13.96□□□□□ -0.18
PTPN20-203ENST00000374342 LINC00312Q9Y6C7 94 aa13.96□□□□□ -0.18
PTPN20-203ENST00000374342 USF3Q68DE3 2245 aa13.95□□□□□ -0.18
PTPN20-203ENST00000374342 SMG1Q96Q15 3661 aaKnown RBP13.95□□□□□ -0.18
PTPN20-203ENST00000374342 A0A1W2PPE3 182 aa13.95□□□□□ -0.18
PTPN20-203ENST00000374342 LINC00473A8K010 186 aa13.95□□□□□ -0.18
PTPN20-203ENST00000374342 LYNX1G3V0Z9 82 aa13.95□□□□□ -0.18
PTPN20-203ENST00000374342 TAAR5O14804 337 aa13.95□□□□□ -0.18
PTPN20-203ENST00000374342 NDUFB3O43676 98 aa13.95□□□□□ -0.18
PTPN20-203ENST00000374342 FCN3O75636 299 aa13.95□□□□□ -0.18
PTPN20-203ENST00000374342 S1PR2O95136 353 aa13.95□□□□□ -0.18
PTPN20-203ENST00000374342 LYNX1P0DP58 116 aa13.95□□□□□ -0.18
PTPN20-203ENST00000374342 SLC25A6P12236 298 aa13.95□□□□□ -0.18
PTPN20-203ENST00000374342 ZNF134P52741 427 aa13.95□□□□□ -0.18
PTPN20-203ENST00000374342 TMEM33P57088 247 aa13.95□□□□□ -0.18
PTPN20-203ENST00000374342 VAMP2P63027 116 aa13.95□□□□□ -0.18
PTPN20-203ENST00000374342 ZNF273Q14593 569 aa13.95□□□□□ -0.18
PTPN20-203ENST00000374342 C11orf1Q9H5F2 150 aa13.95□□□□□ -0.18
PTPN20-203ENST00000374342 CTSZQ9UBR2 303 aa13.95□□□□□ -0.18
PTPN20-203ENST00000374342 LEUTXA8MZ59 168 aa13.94□□□□□ -0.18
PTPN20-203ENST00000374342 M0R1X1 148 aa13.94□□□□□ -0.18
PTPN20-203ENST00000374342 GNG10P50151 68 aa13.94□□□□□ -0.18
PTPN20-203ENST00000374342 CAV2P51636 162 aa13.94□□□□□ -0.18
PTPN20-203ENST00000374342 LINC00205P59089 165 aa13.94□□□□□ -0.18
PTPN20-203ENST00000374342 RPL31P62899 125 aaKnown RBP13.94□□□□□ -0.18
PTPN20-203ENST00000374342 RPL39P5Q59GN2 51 aa13.94□□□□□ -0.18
PTPN20-203ENST00000374342 LRRC10Q5BKY1 277 aa13.94□□□□□ -0.18
PTPN20-203ENST00000374342 RPL7L1Q6DKI1 246 aaKnown RBP13.94□□□□□ -0.18
PTPN20-203ENST00000374342 Q6ZRM9 215 aa13.94□□□□□ -0.18
PTPN20-203ENST00000374342 BAP18Q8IXM2 172 aa13.94□□□□□ -0.18
PTPN20-203ENST00000374342 CORO2AQ92828 525 aa13.94□□□□□ -0.18
PTPN20-203ENST00000374342 BSCL2Q96G97 398 aaPredicted RBP13.94□□□□□ -0.18
PTPN20-203ENST00000374342 ANKRD34BA5PLL1 514 aa13.94□□□□□ -0.18
PTPN20-203ENST00000374342 PITX3O75364 302 aa13.94□□□□□ -0.18
PTPN20-203ENST00000374342 MMP23AO75900 390 aa13.94□□□□□ -0.18
PTPN20-203ENST00000374342 G6PCP35575 357 aa13.94□□□□□ -0.18
PTPN20-203ENST00000374342 RAB7AP51149 207 aa13.94□□□□□ -0.18
PTPN20-203ENST00000374342 ID3Q02535 119 aa13.94□□□□□ -0.18
PTPN20-203ENST00000374342 GAL3ST2Q9H3Q3 398 aa13.94□□□□□ -0.18
PTPN20-203ENST00000374342 AUP1Q9Y679 476 aa13.94□□□□□ -0.18
PTPN20-203ENST00000374342 HRNRQ86YZ3 2850 aaPredicted RBP13.93□□□□□ -0.18
PTPN20-203ENST00000374342 DVL1O14640 695 aa13.93□□□□□ -0.18
PTPN20-203ENST00000374342 TNFRSF13BO14836 293 aaPredicted RBP13.93□□□□□ -0.18
PTPN20-203ENST00000374342 DUTP33316 252 aaKnown RBP13.93□□□□□ -0.18
PTPN20-203ENST00000374342 BRWD1-AS2P59051 145 aa13.93□□□□□ -0.18
PTPN20-203ENST00000374342 MEF2CQ06413 473 aaPredicted RBP13.93□□□□□ -0.18
PTPN20-203ENST00000374342 GPR157Q5UAW9 335 aa13.93□□□□□ -0.18
PTPN20-203ENST00000374342 PDZD9Q8IXQ8 264 aa13.93□□□□□ -0.18
PTPN20-203ENST00000374342 OR2C3Q8N628 320 aa13.93□□□□□ -0.18
PTPN20-203ENST00000374342 TCTEX1D1Q8N7M0 179 aa13.93□□□□□ -0.18
PTPN20-203ENST00000374342 SLC25A32Q9H2D1 315 aa13.93□□□□□ -0.18
PTPN20-203ENST00000374342 FAM24AA6NFZ4 105 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 KRASP01116 189 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 CCL3L1P16619 93 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 COL8A2P25067 703 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 EWSR1Q01844 656 aaKnown RBP eCLIP13.92□□□□□ -0.18
PTPN20-203ENST00000374342 TMEM30BQ3MIR4 351 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 CT45A1Q5HYN5 189 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 NCR3LG1Q68D85 454 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 CT45A3Q8NHU0 189 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 TMED6Q8WW62 240 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 ZNF714Q96N38 554 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 LINC00574Q9H8X3 128 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 CBLN4Q9NTU7 201 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 TAS2R3Q9NYW6 316 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 MMP24Q9Y5R2 645 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 ACACBO00763 2458 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 IGSF23A1L1A6 192 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 ITGB1BP1O14713 200 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 PROP1O75360 226 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 RRASP10301 218 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 AGAP20933 346 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 ZNF439Q8NDP4 499 aa13.92□□□□□ -0.18
PTPN20-203ENST00000374342 FAM212BQ9NTI7 297 aaPredicted RBP13.92□□□□□ -0.18
PTPN20-203ENST00000374342 LYRM2Q9NU23 88 aaPredicted RBP13.92□□□□□ -0.18
PTPN20-203ENST00000374342 RPUSD1Q9UJJ7 312 aaKnown RBP13.92□□□□□ -0.18
PTPN20-203ENST00000374342 SAA2-SAA4A0A096LPE2 208 aa13.91□□□□□ -0.18
PTPN20-203ENST00000374342 CHST1O43916 411 aa13.91□□□□□ -0.18
PTPN20-203ENST00000374342 FCGR3BO75015 233 aa13.91□□□□□ -0.18
PTPN20-203ENST00000374342 ATG12O94817 140 aa13.91□□□□□ -0.18
PTPN20-203ENST00000374342 SAA2P0DJI9 122 aaPredicted RBP13.91□□□□□ -0.18
PTPN20-203ENST00000374342 EIF5AP63241 154 aaKnown RBP13.91□□□□□ -0.18
PTPN20-203ENST00000374342 NHLH2Q02577 135 aa13.91□□□□□ -0.18
PTPN20-203ENST00000374342 RAB1BQ9H0U4 201 aa13.91□□□□□ -0.18
PTPN20-203ENST00000374342 KAAG1Q9UBP8 84 aa13.91□□□□□ -0.18
PTPN20-203ENST00000374342 LPAR3Q9UBY5 353 aa13.91□□□□□ -0.18
PTPN20-203ENST00000374342 TEX46H3BTG2 121 aa13.9□□□□□ -0.18
PTPN20-203ENST00000374342 TMEM50AO95807 157 aa13.9□□□□□ -0.18
PTPN20-203ENST00000374342 GAPDHP04406 335 aaKnown RBP13.9□□□□□ -0.18
PTPN20-203ENST00000374342 SOD3P08294 240 aa13.9□□□□□ -0.18
PTPN20-203ENST00000374342 MMP9P14780 707 aa13.9□□□□□ -0.18
PTPN20-203ENST00000374342 ERVFRD-1P60508 538 aa13.9□□□□□ -0.18
PTPN20-203ENST00000374342 AVPI1Q5T686 147 aa13.9□□□□□ -0.18
PTPN20-203ENST00000374342 TMEM200BQ69YZ2 307 aa13.9□□□□□ -0.18
PTPN20-203ENST00000374342 LYG1Q8N1E2 194 aa13.9□□□□□ -0.18
PTPN20-203ENST00000374342 ABCA4P78363 2273 aa13.9□□□□□ -0.18
PTPN20-203ENST00000374342 IGSF10Q6WRI0 2623 aa13.9□□□□□ -0.18
PTPN20-203ENST00000374342 KIAA1324LA8MWY0 1029 aaPredicted RBP13.9□□□□□ -0.18
PTPN20-203ENST00000374342 C19orf84I3L1E1 186 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms