RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 PHF21AQ96BD5 680 aa11.99□□□□□ -0.49
SS18L1-202ENST00000370848 C5orf30Q96GV9 206 aa11.99□□□□□ -0.49
SS18L1-202ENST00000370848 TOLLIPQ9H0E2 274 aa11.99□□□□□ -0.49
SS18L1-202ENST00000370848 DCSTAMPQ9H295 470 aa11.99□□□□□ -0.49
SS18L1-202ENST00000370848 AUNIPQ9H7T9 357 aa11.99□□□□□ -0.49
SS18L1-202ENST00000370848 PLSCR3Q9NRY6 295 aa11.99□□□□□ -0.49
SS18L1-202ENST00000370848 PIPOXQ9P0Z9 390 aa11.99□□□□□ -0.49
SS18L1-202ENST00000370848 COMMD3Q9UBI1 195 aa11.99□□□□□ -0.49
SS18L1-202ENST00000370848 MEIS3P1A6NDR6 274 aa11.98□□□□□ -0.49
SS18L1-202ENST00000370848 NCBP2LA6PVI3 153 aaKnown RBP11.98□□□□□ -0.49
SS18L1-202ENST00000370848 RAB29O14966 203 aa11.98□□□□□ -0.49
SS18L1-202ENST00000370848 TMEM127O75204 238 aa11.98□□□□□ -0.49
SS18L1-202ENST00000370848 OR8U9P0C7N5 309 aa11.98□□□□□ -0.49
SS18L1-202ENST00000370848 SPCS2Q15005 226 aa11.98□□□□□ -0.49
SS18L1-202ENST00000370848 SRSF7Q16629 238 aaKnown RBP eCLIP11.98□□□□□ -0.49
SS18L1-202ENST00000370848 C10orf99Q6UWK7 81 aa11.98□□□□□ -0.49
SS18L1-202ENST00000370848 FAM131AQ6UXB0 335 aa11.98□□□□□ -0.49
SS18L1-202ENST00000370848 CLVS1Q8IUQ0 354 aaPredicted RBP11.98□□□□□ -0.49
SS18L1-202ENST00000370848 Q8N9W7 124 aa11.98□□□□□ -0.49
SS18L1-202ENST00000370848 DRAXINQ8NBI3 349 aaPredicted RBP11.98□□□□□ -0.49
SS18L1-202ENST00000370848 OR8U1Q8NH10 309 aa11.98□□□□□ -0.49
SS18L1-202ENST00000370848 OR10J5Q8NHC4 309 aa11.98□□□□□ -0.49
SS18L1-202ENST00000370848 R3HDM4Q96D70 268 aa11.98□□□□□ -0.49
SS18L1-202ENST00000370848 DIABLOQ9NR28 239 aa11.98□□□□□ -0.49
SS18L1-202ENST00000370848 AURKAIP1Q9NWT8 199 aaPredicted RBP11.98□□□□□ -0.49
SS18L1-202ENST00000370848 A0A0A6YYH2 397 aa11.97□□□□□ -0.49
SS18L1-202ENST00000370848 A6NJ64 397 aa11.97□□□□□ -0.49
SS18L1-202ENST00000370848 LINC01548A6NM66 108 aa11.97□□□□□ -0.49
SS18L1-202ENST00000370848 J3QRK9 145 aa11.97□□□□□ -0.49
SS18L1-202ENST00000370848 M0QZK8 103 aa11.97□□□□□ -0.49
SS18L1-202ENST00000370848 FGF16O43320 207 aa11.97□□□□□ -0.49
SS18L1-202ENST00000370848 GPR12P47775 334 aa11.97□□□□□ -0.49
SS18L1-202ENST00000370848 TAS2R20P59543 309 aa11.97□□□□□ -0.49
SS18L1-202ENST00000370848 PITPNAQ00169 270 aa11.97□□□□□ -0.49
SS18L1-202ENST00000370848 NSUN5P1Q3KNT7 163 aa11.97□□□□□ -0.49
SS18L1-202ENST00000370848 TCTEX1D4Q5JR98 221 aa11.97□□□□□ -0.49
SS18L1-202ENST00000370848 FAM71F2Q6NXP2 309 aa11.97□□□□□ -0.49
SS18L1-202ENST00000370848 H1FOOQ8IZA3 346 aaPredicted RBP11.97□□□□□ -0.49
SS18L1-202ENST00000370848 KCTD12Q96CX2 325 aaKnown RBP11.97□□□□□ -0.49
SS18L1-202ENST00000370848 S1PR3Q99500 378 aa11.97□□□□□ -0.49
SS18L1-202ENST00000370848 GINS4Q9BRT9 223 aa11.97□□□□□ -0.49
SS18L1-202ENST00000370848 OR2D2Q9H210 308 aa11.97□□□□□ -0.49
SS18L1-202ENST00000370848 LINC00527Q9UJ94 153 aa11.97□□□□□ -0.49
SS18L1-202ENST00000370848 H0YJW9 148 aa11.96□□□□□ -0.49
SS18L1-202ENST00000370848 XRCC3O43542 346 aa11.96□□□□□ -0.49
SS18L1-202ENST00000370848 HPGDSO60760 199 aa11.96□□□□□ -0.49
SS18L1-202ENST00000370848 PEX14O75381 377 aa11.96□□□□□ -0.49
SS18L1-202ENST00000370848 PRB2P02812 416 aaPredicted RBP11.96□□□□□ -0.49
SS18L1-202ENST00000370848 NFYAP23511 347 aaPredicted RBP11.96□□□□□ -0.49
SS18L1-202ENST00000370848 RORCP51449 518 aa11.96□□□□□ -0.49
SS18L1-202ENST00000370848 ACTBP60709 375 aa11.96□□□□□ -0.49
SS18L1-202ENST00000370848 TMEM69Q5SWH9 247 aa11.96□□□□□ -0.49
SS18L1-202ENST00000370848 ZNF383Q8NA42 475 aa11.96□□□□□ -0.49
SS18L1-202ENST00000370848 S100A16Q96FQ6 103 aaKnown RBP11.96□□□□□ -0.49
SS18L1-202ENST00000370848 NOL4LQ96MY1 436 aaPredicted RBP11.96□□□□□ -0.49
SS18L1-202ENST00000370848 HSPB9Q9BQS6 159 aa11.96□□□□□ -0.49
SS18L1-202ENST00000370848 SDHAF2Q9NX18 166 aa11.96□□□□□ -0.49
SS18L1-202ENST00000370848 ZNF221Q9UK13 617 aa11.96□□□□□ -0.49
SS18L1-202ENST00000370848 M0R1X1 148 aa11.95□□□□□ -0.5
SS18L1-202ENST00000370848 DIRAS3O95661 229 aa11.95□□□□□ -0.5
SS18L1-202ENST00000370848 ELK1P19419 428 aa11.95□□□□□ -0.5
SS18L1-202ENST00000370848 RPL5P46777 297 aaKnown RBP11.95□□□□□ -0.5
SS18L1-202ENST00000370848 MMDQ15546 238 aa11.95□□□□□ -0.5
SS18L1-202ENST00000370848 HOGA1Q86XE5 327 aa11.95□□□□□ -0.5
SS18L1-202ENST00000370848 FAM71E2Q8N5Q1 922 aa11.95□□□□□ -0.5
SS18L1-202ENST00000370848 BEST4Q8NFU0 473 aa11.95□□□□□ -0.5
SS18L1-202ENST00000370848 OR5AU1Q8NGC0 362 aa11.95□□□□□ -0.5
SS18L1-202ENST00000370848 MRAPQ8TCY5 172 aa11.95□□□□□ -0.5
SS18L1-202ENST00000370848 SNAPC3Q92966 411 aa11.95□□□□□ -0.5
SS18L1-202ENST00000370848 ANXA10Q9UJ72 324 aa11.95□□□□□ -0.5
SS18L1-202ENST00000370848 IGKV1D-13A0A0B4J2D9 117 aa11.94□□□□□ -0.5
SS18L1-202ENST00000370848 IGKV1-13P0DP09 117 aa11.94□□□□□ -0.5
SS18L1-202ENST00000370848 FOXB2Q5VYV0 432 aa11.94□□□□□ -0.5
SS18L1-202ENST00000370848 CNIH2Q6PI25 160 aa11.94□□□□□ -0.5
SS18L1-202ENST00000370848 OR5AN1Q8NGI8 311 aa11.94□□□□□ -0.5
SS18L1-202ENST00000370848 LIN7CQ9NUP9 197 aaKnown RBP11.94□□□□□ -0.5
SS18L1-202ENST00000370848 RBM7Q9Y580 266 aaKnown RBP11.94□□□□□ -0.5
SS18L1-202ENST00000370848 TENM3Q9P273 2699 aa11.93□□□□□ -0.5
SS18L1-202ENST00000370848 OR5H14A6NHG9 310 aa11.93□□□□□ -0.5
SS18L1-202ENST00000370848 DUS4LO95620 317 aaKnown RBP11.93□□□□□ -0.5
SS18L1-202ENST00000370848 IGHG2P01859 326 aa11.93□□□□□ -0.5
SS18L1-202ENST00000370848 HLA-DQB1P01920 261 aa11.93□□□□□ -0.5
SS18L1-202ENST00000370848 ZNF182P17025 639 aaPredicted RBP11.93□□□□□ -0.5
SS18L1-202ENST00000370848 SLC35E3Q7Z769 313 aa11.93□□□□□ -0.5
SS18L1-202ENST00000370848 ACOT12Q8WYK0 555 aa11.93□□□□□ -0.5
SS18L1-202ENST00000370848 RCC1LQ96I51 464 aaKnown RBP11.93□□□□□ -0.5
SS18L1-202ENST00000370848 RASL11BQ9BPW5 248 aa11.93□□□□□ -0.5
SS18L1-202ENST00000370848 GHITMQ9H3K2 345 aa11.93□□□□□ -0.5
SS18L1-202ENST00000370848 MRPS7Q9Y2R9 242 aaKnown RBP11.93□□□□□ -0.5
SS18L1-202ENST00000370848 WASHC3Q9Y3C0 194 aa11.93□□□□□ -0.5
SS18L1-202ENST00000370848 TSSC4Q9Y5U2 329 aaPredicted RBP11.93□□□□□ -0.5
SS18L1-202ENST00000370848 NBEAL2Q6ZNJ1 2754 aa11.93□□□□□ -0.5
SS18L1-202ENST00000370848 RYR3Q15413 4870 aa11.92□□□□□ -0.5
SS18L1-202ENST00000370848 H7C2Y5 167 aa11.92□□□□□ -0.5
SS18L1-202ENST00000370848 NBR2O15453 112 aa11.92□□□□□ -0.5
SS18L1-202ENST00000370848 APOA1P02647 267 aa11.92□□□□□ -0.5
SS18L1-202ENST00000370848 IGKV1-16P04430 117 aa11.92□□□□□ -0.5
SS18L1-202ENST00000370848 ARPC4P59998 168 aa11.92□□□□□ -0.5
SS18L1-202ENST00000370848 EGFEM1PQ0D2K5 195 aa11.92□□□□□ -0.5
SS18L1-202ENST00000370848 CENPVQ7Z7K6 275 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms