RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 KIR2DS4P43632 304 aa12.07□□□□□ -0.48
SMPDL3A-201ENST00000368440 OR3A3P47888 321 aa12.07□□□□□ -0.48
SMPDL3A-201ENST00000368440 ARHGDIBP52566 201 aa12.07□□□□□ -0.48
SMPDL3A-201ENST00000368440 KIR2DS1Q14954 304 aa12.07□□□□□ -0.48
SMPDL3A-201ENST00000368440 LIAT1Q6ZQX7 453 aa12.07□□□□□ -0.48
SMPDL3A-201ENST00000368440 CAPSLQ8WWF8 208 aa12.07□□□□□ -0.48
SMPDL3A-201ENST00000368440 ST6GALNAC5Q9BVH7 336 aa12.07□□□□□ -0.48
SMPDL3A-201ENST00000368440 PITPNC1Q9UKF7 332 aa12.07□□□□□ -0.48
SMPDL3A-201ENST00000368440 FAM240BA0A1B0GVZ2 78 aa12.06□□□□□ -0.48
SMPDL3A-201ENST00000368440 KLF9Q13886 244 aaPredicted RBP12.06□□□□□ -0.48
SMPDL3A-201ENST00000368440 HABP2Q14520 560 aaPredicted RBP12.06□□□□□ -0.48
SMPDL3A-201ENST00000368440 SRSF7Q16629 238 aaKnown RBP eCLIP12.06□□□□□ -0.48
SMPDL3A-201ENST00000368440 Q6ZS49 121 aa12.06□□□□□ -0.48
SMPDL3A-201ENST00000368440 MOB3BQ86TA1 216 aa12.06□□□□□ -0.48
SMPDL3A-201ENST00000368440 OR4F5Q8NH21 305 aa12.06□□□□□ -0.48
SMPDL3A-201ENST00000368440 LINC01006Q8NI28 216 aa12.06□□□□□ -0.48
SMPDL3A-201ENST00000368440 ABHD14BQ96IU4 210 aa12.06□□□□□ -0.48
SMPDL3A-201ENST00000368440 SAA2-SAA4A0A096LPE2 208 aa12.06□□□□□ -0.48
SMPDL3A-201ENST00000368440 ZNF736B4DX44 427 aaPredicted RBP12.06□□□□□ -0.48
SMPDL3A-201ENST00000368440 TSPAN9O75954 239 aa12.06□□□□□ -0.48
SMPDL3A-201ENST00000368440 SAA2P0DJI9 122 aaPredicted RBP12.06□□□□□ -0.48
SMPDL3A-201ENST00000368440 TGIF2LXQ8IUE1 241 aa12.06□□□□□ -0.48
SMPDL3A-201ENST00000368440 GVQW1Q8N7I0 195 aa12.06□□□□□ -0.48
SMPDL3A-201ENST00000368440 RAB18Q9NP72 206 aa12.06□□□□□ -0.48
SMPDL3A-201ENST00000368440 MCUBQ9NWR8 336 aa12.06□□□□□ -0.48
SMPDL3A-201ENST00000368440 RDH8Q9NYR8 311 aa12.06□□□□□ -0.48
SMPDL3A-201ENST00000368440 SIGLEC9Q9Y336 463 aa12.06□□□□□ -0.48
SMPDL3A-201ENST00000368440 ANK2Q01484 3957 aa12.05□□□□□ -0.48
SMPDL3A-201ENST00000368440 TRBV6-7A0A0A0MS04 114 aa12.05□□□□□ -0.48
SMPDL3A-201ENST00000368440 CENPXA8MT69 81 aa12.05□□□□□ -0.48
SMPDL3A-201ENST00000368440 IGKV1D-33P01593 117 aa12.05□□□□□ -0.48
SMPDL3A-201ENST00000368440 IGKV1-33P01594 117 aa12.05□□□□□ -0.48
SMPDL3A-201ENST00000368440 LPLP06858 475 aa12.05□□□□□ -0.48
SMPDL3A-201ENST00000368440 CCR6P51684 374 aa12.05□□□□□ -0.48
SMPDL3A-201ENST00000368440 Q6ZS46 218 aa12.05□□□□□ -0.48
SMPDL3A-201ENST00000368440 GPX8Q8TED1 209 aa12.05□□□□□ -0.48
SMPDL3A-201ENST00000368440 ZNF251Q9BRH9 671 aa12.05□□□□□ -0.48
SMPDL3A-201ENST00000368440 AGMATQ9BSE5 352 aa12.05□□□□□ -0.48
SMPDL3A-201ENST00000368440 SLC25A33Q9BSK2 321 aa12.05□□□□□ -0.48
SMPDL3A-201ENST00000368440 MTFP1Q9UDX5 166 aa12.05□□□□□ -0.48
SMPDL3A-201ENST00000368440 RBMX2Q9Y388 322 aaKnown RBP12.05□□□□□ -0.48
SMPDL3A-201ENST00000368440 ANKRD20A5PA0PJZ0 165 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 ITGB1BP1O14713 200 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 RAB25P57735 213 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 HES1Q14469 280 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 HNF4GQ14541 408 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 RPL39P5Q59GN2 51 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 ZNF833PQ6ZTB9 187 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 RBM14Q96PK6 669 aaKnown RBP12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 MRPL20Q9BYC9 149 aaKnown RBP12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 TOLLIPQ9H0E2 274 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 C16orf95Q9H693 158 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 ZNF702PQ9H963 129 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 BEX1Q9HBH7 125 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 HRASLSQ9HDD0 168 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 RNF150Q9ULK6 438 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 MMP24Q9Y5R2 645 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 CLPSL1A2RUU4 121 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 TPPPO94811 219 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 HLA-DMAP28067 261 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 BTCP35070 178 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 AP3S2P59780 193 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 BLCAPP62952 87 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 THNSL2Q86YJ6 484 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 OR4C13Q8NGP0 309 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 OR10J5Q8NHC4 309 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 EDARADDQ8WWZ3 215 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 NABP2Q9BQ15 211 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 NPFFR1Q9GZQ6 430 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 IFT46Q9NQC8 304 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 RNF114Q9Y508 228 aa12.04□□□□□ -0.48
SMPDL3A-201ENST00000368440 SH2D7A6NKC9 451 aaPredicted RBP12.03□□□□□ -0.48
SMPDL3A-201ENST00000368440 TXNL1O43396 289 aa12.03□□□□□ -0.48
SMPDL3A-201ENST00000368440 PROP1O75360 226 aa12.03□□□□□ -0.48
SMPDL3A-201ENST00000368440 OR2F2O95006 317 aa12.03□□□□□ -0.48
SMPDL3A-201ENST00000368440 CD3DP04234 171 aa12.03□□□□□ -0.48
SMPDL3A-201ENST00000368440 AMY1AP04745 511 aa12.03□□□□□ -0.48
SMPDL3A-201ENST00000368440 AMY2AP04746 511 aa12.03□□□□□ -0.48
SMPDL3A-201ENST00000368440 FAM106CPP0CH98 169 aa12.03□□□□□ -0.48
SMPDL3A-201ENST00000368440 TMEM11P17152 192 aa12.03□□□□□ -0.48
SMPDL3A-201ENST00000368440 PLET1Q6UQ28 207 aa12.03□□□□□ -0.48
SMPDL3A-201ENST00000368440 C3orf56Q8N813 242 aa12.03□□□□□ -0.48
SMPDL3A-201ENST00000368440 OR4D10Q8NGI6 311 aa12.03□□□□□ -0.48
SMPDL3A-201ENST00000368440 RANBP3Q9H6Z4 567 aaPredicted RBP12.03□□□□□ -0.48
SMPDL3A-201ENST00000368440 SCPEP1Q9HB40 452 aa12.03□□□□□ -0.48
SMPDL3A-201ENST00000368440 PIPOXQ9P0Z9 390 aa12.03□□□□□ -0.48
SMPDL3A-201ENST00000368440 ANXA10Q9UJ72 324 aa12.03□□□□□ -0.48
SMPDL3A-201ENST00000368440 M0QYG6 137 aa12.02□□□□□ -0.48
SMPDL3A-201ENST00000368440 DIRAS3O95661 229 aa12.02□□□□□ -0.48
SMPDL3A-201ENST00000368440 CSF1P09603 554 aa12.02□□□□□ -0.48
SMPDL3A-201ENST00000368440 KRTAP10-3P60369 221 aa12.02□□□□□ -0.48
SMPDL3A-201ENST00000368440 ACTBP60709 375 aa12.02□□□□□ -0.48
SMPDL3A-201ENST00000368440 SRSF4Q08170 494 aaKnown RBP12.02□□□□□ -0.48
SMPDL3A-201ENST00000368440 DYRK1AQ13627 763 aa12.02□□□□□ -0.48
SMPDL3A-201ENST00000368440 EBI3Q14213 229 aa12.02□□□□□ -0.48
SMPDL3A-201ENST00000368440 C16orf82Q7Z2V1 217 aa12.02□□□□□ -0.48
SMPDL3A-201ENST00000368440 BEST4Q8NFU0 473 aa12.02□□□□□ -0.48
SMPDL3A-201ENST00000368440 SNAPC3Q92966 411 aa12.02□□□□□ -0.48
SMPDL3A-201ENST00000368440 EAF1Q96JC9 268 aaPredicted RBP12.02□□□□□ -0.48
SMPDL3A-201ENST00000368440 GINS4Q9BRT9 223 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms