RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 ZNF175Q9Y473 711 aa6.13□□□□□ -1.43
CLCN3-202ENST00000360642 RFNGQ9Y644 331 aa6.13□□□□□ -1.43
CLCN3-202ENST00000360642 TRGV5A0A0B4J1U4 118 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 A0A0G2JRQ6 117 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 IGHV3-64DA0A0J9YX35 117 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 ARGFXA6NJG6 315 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 UMAD1C9J7I0 102 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 MGST3O14880 152 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 TNFSF12O43508 249 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 CHST1O43916 411 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 PRH1P02810 166 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 BAXQ07812 192 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 TGIF1Q15583 401 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 SHEQ5VZ18 495 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 TMEM182Q6ZP80 229 aaPredicted RBP6.12□□□□□ -1.43
CLCN3-202ENST00000360642 Q6ZSN1 163 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 LFNGQ8NES3 379 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 OR8G5Q8NG78 346 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 HIPK2Q9H2X6 1198 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 CBY3A6NI87 242 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 DEGS1O15121 323 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 NHLRC4P0CG21 123 aaPredicted RBP6.12□□□□□ -1.43
CLCN3-202ENST00000360642 CEACAM1P13688 526 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 PPP1CCP36873 323 aaKnown RBP6.12□□□□□ -1.43
CLCN3-202ENST00000360642 DYNLT3P51808 116 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 MZT1Q08AG7 82 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 CLINT1Q14677 625 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 AVPI1Q5T686 147 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 ATP1A1-AS1Q5TC04 95 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 ZNF497Q6ZNH5 498 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 C15orf54Q8N8G6 183 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 OR5C1Q8NGR4 320 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 OR2G3Q8NGZ4 309 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 CITED2Q99967 270 aaPredicted RBP6.12□□□□□ -1.43
CLCN3-202ENST00000360642 EIF5A2Q9GZV4 153 aaKnown RBP6.12□□□□□ -1.43
CLCN3-202ENST00000360642 SAV1Q9H4B6 383 aaPredicted RBP6.12□□□□□ -1.43
CLCN3-202ENST00000360642 SMDT1Q9H4I9 107 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 TUBA4BQ9H853 241 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 ERRFI1Q9UJM3 462 aaPredicted RBP6.12□□□□□ -1.43
CLCN3-202ENST00000360642 BDP1A6H8Y1 2624 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 A0A1B0GU03 582 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 LRP5LA4QPB2 252 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 SMPD2O60906 423 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 MDH2P40926 338 aaKnown RBP6.12□□□□□ -1.43
CLCN3-202ENST00000360642 HOXA1P49639 335 aaPredicted RBP6.12□□□□□ -1.43
CLCN3-202ENST00000360642 ADORA2A-AS1P86434 159 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 TBC1D28Q2M2D7 210 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 SPATA46Q5T0L3 261 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 SPSB3Q6PJ21 355 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 SCCPDHQ8NBX0 429 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 FAM213BQ8TBF2 198 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 GPR146Q96CH1 333 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 GMPPAQ96IJ6 420 aaPredicted RBP6.12□□□□□ -1.43
CLCN3-202ENST00000360642 CLCC1Q96S66 551 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 SLC35B3Q9H1N7 401 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 OR1A1Q9P1Q5 309 aa6.12□□□□□ -1.43
CLCN3-202ENST00000360642 PIGBOS1A0A0B4J2F0 54 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 A0A1W2PR80 420 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 C7orf77A4D0Y5 90 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 OR2H2O95918 312 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 IGKV1-39P01597 117 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 IGKV1D-39P04432 117 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 PSG2P11465 335 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 OMGP23515 440 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 ZNF146Q15072 292 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 OR8G1Q15617 311 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 Q8IYB0 196 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 OR10V1Q8NGI7 309 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 Q8TCH9 128 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 PBDC1Q9BVG4 233 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 RTL8AQ9BWD3 113 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 TM2D2Q9BX73 214 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 PRR14LQ5THK1 2151 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 A0A1B0GV50 99 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 CST7O76096 145 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 NXPH3O95157 252 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 PGA5P0DJD9 388 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 ZNF44P15621 663 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 IGHV1-2P23083 117 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 S100GP29377 79 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 CCL20P78556 96 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 PET117Q6UWS5 81 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 MOB1BQ7L9L4 216 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 LSM10Q969L4 123 aaKnown RBP6.11□□□□□ -1.43
CLCN3-202ENST00000360642 GNPNAT1Q96EK6 184 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-202ENST00000360642 OR2J1Q9GZK6 312 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 ESRP2Q9H6T0 727 aaKnown RBP6.11□□□□□ -1.43
CLCN3-202ENST00000360642 WIPI2Q9Y4P8 454 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 EP300Q09472 2414 aaPredicted RBP6.11□□□□□ -1.43
CLCN3-202ENST00000360642 ESPL1Q14674 2120 aa6.11□□□□□ -1.43
CLCN3-202ENST00000360642 HSPA12AO43301 675 aa6.1□□□□□ -1.43
CLCN3-202ENST00000360642 TXNL1O43396 289 aa6.1□□□□□ -1.43
CLCN3-202ENST00000360642 ACAA1P09110 424 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-202ENST00000360642 PPP1CBP62140 327 aa6.1□□□□□ -1.43
CLCN3-202ENST00000360642 ARG2P78540 354 aa6.1□□□□□ -1.43
CLCN3-202ENST00000360642 ZNF154Q13106 437 aa6.1□□□□□ -1.43
CLCN3-202ENST00000360642 GUSBP1Q15486 140 aa6.1□□□□□ -1.43
CLCN3-202ENST00000360642 ANXA2RQ3ZCQ2 193 aa6.1□□□□□ -1.43
CLCN3-202ENST00000360642 RNF212Q495C1 297 aa6.1□□□□□ -1.43
CLCN3-202ENST00000360642 AKIRIN2Q53H80 203 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms