RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 PHOX2AO14813 284 aa15.32■□□□□ 0.04
SPNS3-201ENST00000355530 CEBPDP49716 269 aaPredicted RBP15.32■□□□□ 0.04
SPNS3-201ENST00000355530 PSMB3P49720 205 aa15.32■□□□□ 0.04
SPNS3-201ENST00000355530 ALKBH6Q3KRA9 238 aa15.32■□□□□ 0.04
SPNS3-201ENST00000355530 DNLZQ5SXM8 178 aa15.32■□□□□ 0.04
SPNS3-201ENST00000355530 GFI1BQ5VTD9 330 aa15.32■□□□□ 0.04
SPNS3-201ENST00000355530 BEND4Q6ZU67 534 aa15.32■□□□□ 0.04
SPNS3-201ENST00000355530 TCTEX1D1Q8N7M0 179 aa15.32■□□□□ 0.04
SPNS3-201ENST00000355530 NINJ1Q92982 152 aa15.32■□□□□ 0.04
SPNS3-201ENST00000355530 MANBALQ9NQG1 85 aa15.32■□□□□ 0.04
SPNS3-201ENST00000355530 IL17BQ9UHF5 180 aa15.32■□□□□ 0.04
SPNS3-201ENST00000355530 C1QTNF9BB2RNN3 333 aa15.31■□□□□ 0.04
SPNS3-201ENST00000355530 GATCO43716 136 aaKnown RBP15.31■□□□□ 0.04
SPNS3-201ENST00000355530 ZNF816Q0VGE8 651 aaPredicted RBP15.31■□□□□ 0.04
SPNS3-201ENST00000355530 PSG7Q13046 419 aa15.31■□□□□ 0.04
SPNS3-201ENST00000355530 ADIRFQ15847 76 aa15.31■□□□□ 0.04
SPNS3-201ENST00000355530 TMEM241Q24JQ0 296 aa15.31■□□□□ 0.04
SPNS3-201ENST00000355530 C5orf30Q96GV9 206 aa15.31■□□□□ 0.04
SPNS3-201ENST00000355530 CIB3Q96Q77 187 aaPredicted RBP15.31■□□□□ 0.04
SPNS3-201ENST00000355530 ARRDC1-AS1Q9H2J1 176 aa15.31■□□□□ 0.04
SPNS3-201ENST00000355530 SLC25A22Q9H936 323 aa15.31■□□□□ 0.04
SPNS3-201ENST00000355530 MED13Q9UHV7 2174 aa15.31■□□□□ 0.04
SPNS3-201ENST00000355530 TRBV23-1A0A0A0MS06 115 aa15.31■□□□□ 0.04
SPNS3-201ENST00000355530 IGHV3-64DA0A0J9YX35 117 aa15.31■□□□□ 0.04
SPNS3-201ENST00000355530 S1PR2O95136 353 aa15.31■□□□□ 0.04
SPNS3-201ENST00000355530 FGF7P21781 194 aa15.31■□□□□ 0.04
SPNS3-201ENST00000355530 RPL30P62888 115 aaKnown RBP15.31■□□□□ 0.04
SPNS3-201ENST00000355530 ZNF808Q8N4W9 903 aaPredicted RBP15.31■□□□□ 0.04
SPNS3-201ENST00000355530 ZNF383Q8NA42 475 aa15.31■□□□□ 0.04
SPNS3-201ENST00000355530 OR10A7Q8NGE5 316 aa15.31■□□□□ 0.04
SPNS3-201ENST00000355530 PFDN5Q99471 154 aa15.31■□□□□ 0.04
SPNS3-201ENST00000355530 MRPL37Q9BZE1 423 aaKnown RBP15.31■□□□□ 0.04
SPNS3-201ENST00000355530 CLN8Q9UBY8 286 aa15.31■□□□□ 0.04
SPNS3-201ENST00000355530 LAMP3Q9UQV4 416 aa15.31■□□□□ 0.04
SPNS3-201ENST00000355530 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.3■□□□□ 0.04
SPNS3-201ENST00000355530 LNP1A1A4G5 178 aa15.3■□□□□ 0.04
SPNS3-201ENST00000355530 CLDN14O95500 239 aa15.3■□□□□ 0.04
SPNS3-201ENST00000355530 HBZP02008 142 aa15.3■□□□□ 0.04
SPNS3-201ENST00000355530 IGHV1-2P23083 117 aa15.3■□□□□ 0.04
SPNS3-201ENST00000355530 OR10P1Q8NGE3 313 aa15.3■□□□□ 0.04
SPNS3-201ENST00000355530 DTD1Q8TEA8 209 aa15.3■□□□□ 0.04
SPNS3-201ENST00000355530 PMS2P5A8MQ11 134 aa15.29■□□□□ 0.04
SPNS3-201ENST00000355530 PDZD11Q5EBL8 140 aa15.29■□□□□ 0.04
SPNS3-201ENST00000355530 OR52L2PQ8NGH6 319 aa15.29■□□□□ 0.04
SPNS3-201ENST00000355530 OR10G9Q8NGN4 311 aa15.29■□□□□ 0.04
SPNS3-201ENST00000355530 OR10G7Q8NGN6 311 aa15.29■□□□□ 0.04
SPNS3-201ENST00000355530 ZDHHC11Q9H8X9 412 aa15.29■□□□□ 0.04
SPNS3-201ENST00000355530 OBP2BQ9NPH6 170 aa15.29■□□□□ 0.04
SPNS3-201ENST00000355530 KIAA2026Q5HYC2 2103 aa15.29■□□□□ 0.04
SPNS3-201ENST00000355530 RAB29O14966 203 aa15.29■□□□□ 0.04
SPNS3-201ENST00000355530 COX5AP20674 150 aa15.29■□□□□ 0.04
SPNS3-201ENST00000355530 VWC2Q2TAL6 325 aa15.29■□□□□ 0.04
SPNS3-201ENST00000355530 BSXQ3C1V8 233 aa15.29■□□□□ 0.04
SPNS3-201ENST00000355530 RNFT1Q5M7Z0 435 aa15.29■□□□□ 0.04
SPNS3-201ENST00000355530 INO80CQ6PI98 192 aaPredicted RBP15.29■□□□□ 0.04
SPNS3-201ENST00000355530 C16orf82Q7Z2V1 217 aa15.29■□□□□ 0.04
SPNS3-201ENST00000355530 KLF14Q8TD94 323 aaPredicted RBP15.29■□□□□ 0.04
SPNS3-201ENST00000355530 TAAR6Q96RI8 345 aa15.29■□□□□ 0.04
SPNS3-201ENST00000355530 ACTR3CQ9C0K3 210 aaPredicted RBP15.29■□□□□ 0.04
SPNS3-201ENST00000355530 SRD5A3Q9H8P0 318 aa15.29■□□□□ 0.04
SPNS3-201ENST00000355530 PITPNC1Q9UKF7 332 aa15.29■□□□□ 0.04
SPNS3-201ENST00000355530 C17orf98A8MV24 154 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 CD55P08174 381 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 HIST1H1BP16401 226 aaKnown RBP15.28■□□□□ 0.04
SPNS3-201ENST00000355530 C4orf17Q53FE4 359 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 FFAR4Q5NUL3 377 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 PRR7Q8TB68 274 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 RPUSD4Q96CM3 377 aaKnown RBP15.28■□□□□ 0.04
SPNS3-201ENST00000355530 COQ2Q96H96 371 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 SNX22Q96L94 193 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 PYGO2Q9BRQ0 406 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 NPCDR1Q9BY65 106 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 GFOD1Q9NXC2 390 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 ZG16O60844 167 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 LYZL6O75951 148 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 RD3LP0DJH9 198 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 FABP4P15090 132 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 MPV17P39210 176 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 RPL23P62829 140 aaKnown RBP15.28■□□□□ 0.04
SPNS3-201ENST00000355530 AESQ08117 197 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 CDPF1Q6NVV7 123 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 H2BFWTQ7Z2G1 175 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 TMEM178AQ8NBL3 297 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 PARLQ9H300 379 aa15.28■□□□□ 0.04
SPNS3-201ENST00000355530 ZNF891A8MT65 544 aaPredicted RBP15.27■□□□□ 0.04
SPNS3-201ENST00000355530 WNT9BO14905 357 aa15.27■□□□□ 0.04
SPNS3-201ENST00000355530 MLNRO43193 412 aa15.27■□□□□ 0.04
SPNS3-201ENST00000355530 PFN1P07737 140 aaKnown RBP15.27■□□□□ 0.04
SPNS3-201ENST00000355530 GABRA2P47869 451 aa15.27■□□□□ 0.04
SPNS3-201ENST00000355530 BRWD1-AS2P59051 145 aa15.27■□□□□ 0.04
SPNS3-201ENST00000355530 ARG2P78540 354 aa15.27■□□□□ 0.04
SPNS3-201ENST00000355530 HNF4GQ14541 408 aa15.27■□□□□ 0.04
SPNS3-201ENST00000355530 ZNF66Q6ZN08 573 aa15.27■□□□□ 0.04
SPNS3-201ENST00000355530 ACP7Q6ZNF0 438 aa15.27■□□□□ 0.04
SPNS3-201ENST00000355530 TGIF2LYQ8IUE0 185 aa15.27■□□□□ 0.04
SPNS3-201ENST00000355530 ZNF709Q8N972 641 aa15.27■□□□□ 0.04
SPNS3-201ENST00000355530 PRDM13Q9H4Q3 707 aa15.27■□□□□ 0.04
SPNS3-201ENST00000355530 FAM186AA6NE01 2351 aa15.27■□□□□ 0.03
SPNS3-201ENST00000355530 H7BYZ3 331 aa15.26■□□□□ 0.03
SPNS3-201ENST00000355530 HMGB3O15347 200 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms