RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 A0A1W2PNU3 283 aaPredicted RBP20.59■□□□□ 0.89
CPNE1-202ENST00000352393 C21orf140B9A014 251 aa20.59■□□□□ 0.89
CPNE1-202ENST00000352393 C12orf77C9JDV5 145 aa20.59■□□□□ 0.89
CPNE1-202ENST00000352393 PSPNO60542 156 aa20.59■□□□□ 0.89
CPNE1-202ENST00000352393 OR3A1P47881 315 aa20.59■□□□□ 0.89
CPNE1-202ENST00000352393 CEBPDP49716 269 aaPredicted RBP20.59■□□□□ 0.89
CPNE1-202ENST00000352393 PSMB3P49720 205 aa20.59■□□□□ 0.89
CPNE1-202ENST00000352393 DEFA6Q01524 100 aa20.59■□□□□ 0.89
CPNE1-202ENST00000352393 GAMTQ14353 236 aa20.59■□□□□ 0.89
CPNE1-202ENST00000352393 GABRA6Q16445 453 aa20.59■□□□□ 0.89
CPNE1-202ENST00000352393 MDS2Q8NDY4 140 aa20.59■□□□□ 0.89
CPNE1-202ENST00000352393 KCNIP1Q9NZI2 227 aa20.59■□□□□ 0.89
CPNE1-202ENST00000352393 KLF13Q9Y2Y9 288 aaPredicted RBP20.59■□□□□ 0.89
CPNE1-202ENST00000352393 DMDP11532 3685 aa20.59■□□□□ 0.89
CPNE1-202ENST00000352393 KRASP01116 189 aa20.59■□□□□ 0.89
CPNE1-202ENST00000352393 GPX4P36969 197 aaPredicted RBP20.59■□□□□ 0.89
CPNE1-202ENST00000352393 DBX2Q6ZNG2 339 aa20.59■□□□□ 0.89
CPNE1-202ENST00000352393 RPUSD4Q96CM3 377 aaKnown RBP20.59■□□□□ 0.89
CPNE1-202ENST00000352393 MRPL37Q9BZE1 423 aaKnown RBP20.59■□□□□ 0.89
CPNE1-202ENST00000352393 S1PR2O95136 353 aa20.58■□□□□ 0.89
CPNE1-202ENST00000352393 MBP02144 154 aa20.58■□□□□ 0.89
CPNE1-202ENST00000352393 FGF7P21781 194 aa20.58■□□□□ 0.89
CPNE1-202ENST00000352393 ZNF816Q0VGE8 651 aaPredicted RBP20.58■□□□□ 0.89
CPNE1-202ENST00000352393 HNF4GQ14541 408 aa20.58■□□□□ 0.89
CPNE1-202ENST00000352393 TGIF2LYQ8IUE0 185 aa20.58■□□□□ 0.89
CPNE1-202ENST00000352393 TMEM183AQ8IXX5 376 aa20.58■□□□□ 0.89
CPNE1-202ENST00000352393 PARLQ9H300 379 aa20.58■□□□□ 0.89
CPNE1-202ENST00000352393 MANBALQ9NQG1 85 aa20.58■□□□□ 0.89
CPNE1-202ENST00000352393 CTNNBIP1Q9NSA3 81 aaPredicted RBP20.58■□□□□ 0.89
CPNE1-202ENST00000352393 AHCTF1Q8WYP5 2266 aa20.58■□□□□ 0.88
CPNE1-202ENST00000352393 IGHV3-64DA0A0J9YX35 117 aa20.57■□□□□ 0.88
CPNE1-202ENST00000352393 HMGB3O15347 200 aaKnown RBP20.57■□□□□ 0.88
CPNE1-202ENST00000352393 RAC2P15153 192 aa20.57■□□□□ 0.88
CPNE1-202ENST00000352393 BRWD1-AS2P59051 145 aa20.57■□□□□ 0.88
CPNE1-202ENST00000352393 OR51G1Q8NGK1 321 aa20.57■□□□□ 0.88
CPNE1-202ENST00000352393 OR10G9Q8NGN4 311 aa20.57■□□□□ 0.88
CPNE1-202ENST00000352393 OR10G7Q8NGN6 311 aa20.57■□□□□ 0.88
CPNE1-202ENST00000352393 GALMQ96C23 342 aa20.57■□□□□ 0.88
CPNE1-202ENST00000352393 MED13Q9UHV7 2174 aa20.57■□□□□ 0.88
CPNE1-202ENST00000352393 DIDO1Q9BTC0 2240 aaKnown RBP20.57■□□□□ 0.88
CPNE1-202ENST00000352393 IQCF6A8MYZ5 107 aa20.57■□□□□ 0.88
CPNE1-202ENST00000352393 C1QTNF9BB2RNN3 333 aa20.57■□□□□ 0.88
CPNE1-202ENST00000352393 CATR1Q13166 79 aa20.57■□□□□ 0.88
CPNE1-202ENST00000352393 VWC2Q2TAL6 325 aa20.57■□□□□ 0.88
CPNE1-202ENST00000352393 FAM53AQ6NSI3 398 aaPredicted RBP20.57■□□□□ 0.88
CPNE1-202ENST00000352393 ZNF808Q8N4W9 903 aaPredicted RBP20.57■□□□□ 0.88
CPNE1-202ENST00000352393 GAB2Q9UQC2 676 aa20.57■□□□□ 0.88
CPNE1-202ENST00000352393 TMEM210A6NLX4 147 aa20.56■□□□□ 0.88
CPNE1-202ENST00000352393 TFF3Q07654 80 aa20.56■□□□□ 0.88
CPNE1-202ENST00000352393 MRPL49Q13405 166 aaKnown RBP20.56■□□□□ 0.88
CPNE1-202ENST00000352393 SLC10A1Q14973 349 aa20.56■□□□□ 0.88
CPNE1-202ENST00000352393 FFAR4Q5NUL3 377 aa20.56■□□□□ 0.88
CPNE1-202ENST00000352393 OR52L2PQ8NGH6 319 aa20.56■□□□□ 0.88
CPNE1-202ENST00000352393 SLC25A40Q8TBP6 338 aa20.56■□□□□ 0.88
CPNE1-202ENST00000352393 GATAD1Q8WUU5 269 aa20.56■□□□□ 0.88
CPNE1-202ENST00000352393 S100PBPQ96BU1 408 aa20.56■□□□□ 0.88
CPNE1-202ENST00000352393 C17orf98A8MV24 154 aa20.56■□□□□ 0.88
CPNE1-202ENST00000352393 H7BYZ3 331 aa20.56■□□□□ 0.88
CPNE1-202ENST00000352393 ZG16O60844 167 aa20.56■□□□□ 0.88
CPNE1-202ENST00000352393 COL10A1Q03692 680 aa20.56■□□□□ 0.88
CPNE1-202ENST00000352393 TLE1Q04724 770 aa20.56■□□□□ 0.88
CPNE1-202ENST00000352393 GTF3C1Q12789 2109 aa20.56■□□□□ 0.88
CPNE1-202ENST00000352393 LPAL2Q16609 132 aa20.56■□□□□ 0.88
CPNE1-202ENST00000352393 SLC35E4Q6ICL7 350 aa20.56■□□□□ 0.88
CPNE1-202ENST00000352393 FIP1L1Q6UN15 594 aaKnown RBP20.56■□□□□ 0.88
CPNE1-202ENST00000352393 DTD1Q8TEA8 209 aa20.56■□□□□ 0.88
CPNE1-202ENST00000352393 LAMP3Q9UQV4 416 aa20.56■□□□□ 0.88
CPNE1-202ENST00000352393 USF3Q68DE3 2245 aa20.55■□□□□ 0.88
CPNE1-202ENST00000352393 SMCO3A2RU48 225 aa20.55■□□□□ 0.88
CPNE1-202ENST00000352393 KLRC4-KLRK1H3BQV0 150 aa20.55■□□□□ 0.88
CPNE1-202ENST00000352393 GRPP07492 148 aa20.55■□□□□ 0.88
CPNE1-202ENST00000352393 SELEP16581 610 aa20.55■□□□□ 0.88
CPNE1-202ENST00000352393 GZMHP20718 246 aa20.55■□□□□ 0.88
CPNE1-202ENST00000352393 IL2RGP31785 369 aa20.55■□□□□ 0.88
CPNE1-202ENST00000352393 GALR1P47211 349 aa20.55■□□□□ 0.88
CPNE1-202ENST00000352393 IDH3GP51553 393 aaPredicted RBP20.55■□□□□ 0.88
CPNE1-202ENST00000352393 NECAP1Q8NC96 275 aa20.55■□□□□ 0.88
CPNE1-202ENST00000352393 OR10P1Q8NGE3 313 aa20.55■□□□□ 0.88
CPNE1-202ENST00000352393 OR5R1Q8NH85 324 aa20.55■□□□□ 0.88
CPNE1-202ENST00000352393 NPCDR1Q9BY65 106 aa20.55■□□□□ 0.88
CPNE1-202ENST00000352393 ACTR3CQ9C0K3 210 aaPredicted RBP20.55■□□□□ 0.88
CPNE1-202ENST00000352393 SPRR3Q9UBC9 169 aa20.55■□□□□ 0.88
CPNE1-202ENST00000352393 OOEPA6NGQ2 149 aa20.54■□□□□ 0.88
CPNE1-202ENST00000352393 CLDN14O95500 239 aa20.54■□□□□ 0.88
CPNE1-202ENST00000352393 HBZP02008 142 aa20.54■□□□□ 0.88
CPNE1-202ENST00000352393 ZNF883P0CG24 379 aa20.54■□□□□ 0.88
CPNE1-202ENST00000352393 COA6Q5JTJ3 125 aaKnown RBP20.54■□□□□ 0.88
CPNE1-202ENST00000352393 OR4F5Q8NH21 305 aa20.54■□□□□ 0.88
CPNE1-202ENST00000352393 ZDHHC16Q969W1 377 aa20.54■□□□□ 0.88
CPNE1-202ENST00000352393 OR4F4Q96R69 305 aa20.54■□□□□ 0.88
CPNE1-202ENST00000352393 RAB29O14966 203 aa20.54■□□□□ 0.88
CPNE1-202ENST00000352393 COX5AP20674 150 aa20.54■□□□□ 0.88
CPNE1-202ENST00000352393 PKIAP61925 76 aa20.54■□□□□ 0.88
CPNE1-202ENST00000352393 PSG7Q13046 419 aa20.54■□□□□ 0.88
CPNE1-202ENST00000352393 C1orf210Q8IVY1 113 aa20.54■□□□□ 0.88
CPNE1-202ENST00000352393 C14orf144Q96I85 54 aa20.54■□□□□ 0.88
CPNE1-202ENST00000352393 DEFB127Q9H1M4 99 aa20.54■□□□□ 0.88
CPNE1-202ENST00000352393 FAM186AA6NE01 2351 aa20.53■□□□□ 0.88
CPNE1-202ENST00000352393 HRASP01112 189 aa20.53■□□□□ 0.88
CPNE1-202ENST00000352393 OR1P1Q8NH06 330 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms