RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 IGSF11Q5DX21 431 aa12.47□□□□□ -0.41
TSPAN4-201ENST00000346501 CXorf66Q5JRM2 361 aaPredicted RBP12.47□□□□□ -0.41
TSPAN4-201ENST00000346501 LIN54Q6MZP7 749 aa12.47□□□□□ -0.41
TSPAN4-201ENST00000346501 Q6ZS49 121 aa12.47□□□□□ -0.41
TSPAN4-201ENST00000346501 FAM71E2Q8N5Q1 922 aa12.47□□□□□ -0.41
TSPAN4-201ENST00000346501 OR8U1Q8NH10 309 aa12.47□□□□□ -0.41
TSPAN4-201ENST00000346501 LINC00527Q9UJ94 153 aa12.47□□□□□ -0.41
TSPAN4-201ENST00000346501 SPATA2Q9UM82 520 aa12.47□□□□□ -0.41
TSPAN4-201ENST00000346501 TMEM235A6NFC5 223 aa12.46□□□□□ -0.41
TSPAN4-201ENST00000346501 M0R1X1 148 aa12.46□□□□□ -0.41
TSPAN4-201ENST00000346501 CT45A6P0DMU7 189 aa12.46□□□□□ -0.41
TSPAN4-201ENST00000346501 CT45A5P0DMU8 189 aa12.46□□□□□ -0.41
TSPAN4-201ENST00000346501 CT45A7P0DMV0 189 aa12.46□□□□□ -0.41
TSPAN4-201ENST00000346501 CD33P20138 364 aa12.46□□□□□ -0.41
TSPAN4-201ENST00000346501 LSM3P62310 102 aaKnown RBP12.46□□□□□ -0.41
TSPAN4-201ENST00000346501 C5orf64Q2M2E5 130 aa12.46□□□□□ -0.41
TSPAN4-201ENST00000346501 HIST2H2BDQ6DRA6 164 aa12.46□□□□□ -0.41
TSPAN4-201ENST00000346501 MAFIPQ8WZ33 124 aa12.46□□□□□ -0.41
TSPAN4-201ENST00000346501 YIPF6Q96EC8 236 aa12.46□□□□□ -0.41
TSPAN4-201ENST00000346501 S100A16Q96FQ6 103 aaKnown RBP12.46□□□□□ -0.41
TSPAN4-201ENST00000346501 TSNAXQ99598 290 aaKnown RBP12.46□□□□□ -0.41
TSPAN4-201ENST00000346501 TOLLIPQ9H0E2 274 aa12.46□□□□□ -0.41
TSPAN4-201ENST00000346501 PARP12Q9H0J9 701 aaKnown RBP12.46□□□□□ -0.41
TSPAN4-201ENST00000346501 OR2D2Q9H210 308 aa12.46□□□□□ -0.41
TSPAN4-201ENST00000346501 TRAV18A0A075B6X5 111 aa12.45□□□□□ -0.42
TSPAN4-201ENST00000346501 IGKV1-6A0A0C4DH72 117 aa12.45□□□□□ -0.42
TSPAN4-201ENST00000346501 H0YJW9 148 aa12.45□□□□□ -0.42
TSPAN4-201ENST00000346501 RPS16P62249 146 aaKnown RBP12.45□□□□□ -0.42
TSPAN4-201ENST00000346501 DEFA6Q01524 100 aa12.45□□□□□ -0.42
TSPAN4-201ENST00000346501 ZNF260Q3ZCT1 412 aa12.45□□□□□ -0.42
TSPAN4-201ENST00000346501 GLDNQ6ZMI3 551 aaPredicted RBP12.45□□□□□ -0.42
TSPAN4-201ENST00000346501 PDPNQ86YL7 162 aa12.45□□□□□ -0.42
TSPAN4-201ENST00000346501 NPBQ8NG41 125 aa12.45□□□□□ -0.42
TSPAN4-201ENST00000346501 OR5AN1Q8NGI8 311 aa12.45□□□□□ -0.42
TSPAN4-201ENST00000346501 GAB2Q9UQC2 676 aa12.45□□□□□ -0.42
TSPAN4-201ENST00000346501 RRHO14718 337 aa12.44□□□□□ -0.42
TSPAN4-201ENST00000346501 SLC22A5O76082 557 aa12.44□□□□□ -0.42
TSPAN4-201ENST00000346501 HLA-DRB1P01911 266 aa12.44□□□□□ -0.42
TSPAN4-201ENST00000346501 ELANEP08246 267 aa12.44□□□□□ -0.42
TSPAN4-201ENST00000346501 RRASP10301 218 aa12.44□□□□□ -0.42
TSPAN4-201ENST00000346501 CBX5P45973 191 aa12.44□□□□□ -0.42
TSPAN4-201ENST00000346501 ARPC4P59998 168 aa12.44□□□□□ -0.42
TSPAN4-201ENST00000346501 RTL8BQ17RB0 113 aa12.44□□□□□ -0.42
TSPAN4-201ENST00000346501 CNIH2Q6PI25 160 aa12.44□□□□□ -0.42
TSPAN4-201ENST00000346501 TMEM65Q6PI78 240 aa12.44□□□□□ -0.42
TSPAN4-201ENST00000346501 DRAXINQ8NBI3 349 aaPredicted RBP12.44□□□□□ -0.42
TSPAN4-201ENST00000346501 ABHD5Q8WTS1 349 aa12.44□□□□□ -0.42
TSPAN4-201ENST00000346501 NUDCD2Q8WVJ2 157 aa12.44□□□□□ -0.42
TSPAN4-201ENST00000346501 FLYWCH2Q96CP2 140 aaKnown RBP12.44□□□□□ -0.42
TSPAN4-201ENST00000346501 ADTRPQ96IZ2 230 aa12.44□□□□□ -0.42
TSPAN4-201ENST00000346501 SLC35D1Q9NTN3 355 aa12.44□□□□□ -0.42
TSPAN4-201ENST00000346501 ADARB2-AS1A8MUL3 147 aa12.43□□□□□ -0.42
TSPAN4-201ENST00000346501 NDUFA3O95167 84 aa12.43□□□□□ -0.42
TSPAN4-201ENST00000346501 SPDEFO95238 335 aa12.43□□□□□ -0.42
TSPAN4-201ENST00000346501 IGF1P05019 195 aa12.43□□□□□ -0.42
TSPAN4-201ENST00000346501 THBS3P49746 956 aa12.43□□□□□ -0.42
TSPAN4-201ENST00000346501 LUMP51884 338 aaPredicted RBP12.43□□□□□ -0.42
TSPAN4-201ENST00000346501 RPL23AP62750 156 aaKnown RBP12.43□□□□□ -0.42
TSPAN4-201ENST00000346501 TMEM267Q0VDI3 215 aaPredicted RBP12.43□□□□□ -0.42
TSPAN4-201ENST00000346501 FOXE3Q13461 319 aa12.43□□□□□ -0.42
TSPAN4-201ENST00000346501 TCTEX1D4Q5JR98 221 aa12.43□□□□□ -0.42
TSPAN4-201ENST00000346501 C10orf99Q6UWK7 81 aa12.43□□□□□ -0.42
TSPAN4-201ENST00000346501 OR5H6Q8NGV6 325 aa12.43□□□□□ -0.42
TSPAN4-201ENST00000346501 KCTD12Q96CX2 325 aaKnown RBP12.43□□□□□ -0.42
TSPAN4-201ENST00000346501 HSPB9Q9BQS6 159 aa12.43□□□□□ -0.42
TSPAN4-201ENST00000346501 FUNDC2Q9BWH2 189 aa12.43□□□□□ -0.42
TSPAN4-201ENST00000346501 OR51J1Q9H342 316 aa12.43□□□□□ -0.42
TSPAN4-201ENST00000346501 PARP11Q9NR21 331 aa12.43□□□□□ -0.42
TSPAN4-201ENST00000346501 ZNF580Q9UK33 172 aa12.43□□□□□ -0.42
TSPAN4-201ENST00000346501 SMIM31A0A1B0GVY4 71 aa12.42□□□□□ -0.42
TSPAN4-201ENST00000346501 TRIM64CA6NLI5 447 aa12.42□□□□□ -0.42
TSPAN4-201ENST00000346501 LINC01548A6NM66 108 aa12.42□□□□□ -0.42
TSPAN4-201ENST00000346501 CNTFRP26992 372 aa12.42□□□□□ -0.42
TSPAN4-201ENST00000346501 CD40LGP29965 261 aa12.42□□□□□ -0.42
TSPAN4-201ENST00000346501 RPS19P39019 145 aaKnown RBP12.42□□□□□ -0.42
TSPAN4-201ENST00000346501 LGALS7P47929 136 aa12.42□□□□□ -0.42
TSPAN4-201ENST00000346501 UBE2NLQ5JXB2 153 aa12.42□□□□□ -0.42
TSPAN4-201ENST00000346501 ZNF660Q6AZW8 331 aaPredicted RBP12.42□□□□□ -0.42
TSPAN4-201ENST00000346501 H1FOOQ8IZA3 346 aaPredicted RBP12.42□□□□□ -0.42
TSPAN4-201ENST00000346501 KLHL30-AS1Q8NEE0 82 aa12.42□□□□□ -0.42
TSPAN4-201ENST00000346501 BEST4Q8NFU0 473 aa12.42□□□□□ -0.42
TSPAN4-201ENST00000346501 SLC25A38Q96DW6 304 aa12.42□□□□□ -0.42
TSPAN4-201ENST00000346501 FBXL15Q9H469 300 aa12.42□□□□□ -0.42
TSPAN4-201ENST00000346501 SDHAF2Q9NX18 166 aa12.42□□□□□ -0.42
TSPAN4-201ENST00000346501 METTL1Q9UBP6 276 aaKnown RBP12.42□□□□□ -0.42
TSPAN4-201ENST00000346501 ANXA10Q9UJ72 324 aa12.42□□□□□ -0.42
TSPAN4-201ENST00000346501 ELF5Q9UKW6 265 aaPredicted RBP12.42□□□□□ -0.42
TSPAN4-201ENST00000346501 DUS4LO95620 317 aaKnown RBP12.41□□□□□ -0.42
TSPAN4-201ENST00000346501 ZNF695Q8IW36 515 aa12.41□□□□□ -0.42
TSPAN4-201ENST00000346501 TCTEX1D1Q8N7M0 179 aa12.41□□□□□ -0.42
TSPAN4-201ENST00000346501 SAMD12Q8N8I0 201 aa12.41□□□□□ -0.42
TSPAN4-201ENST00000346501 GPR61Q9BZJ8 451 aa12.41□□□□□ -0.42
TSPAN4-201ENST00000346501 IFT46Q9NQC8 304 aa12.41□□□□□ -0.42
TSPAN4-201ENST00000346501 PRELID3BQ9Y3B1 194 aa12.41□□□□□ -0.42
TSPAN4-201ENST00000346501 OR2W1Q9Y3N9 320 aa12.41□□□□□ -0.42
TSPAN4-201ENST00000346501 TRAV41A0A0B4J266 112 aa12.4□□□□□ -0.42
TSPAN4-201ENST00000346501 SHOXO15266 292 aa12.4□□□□□ -0.42
TSPAN4-201ENST00000346501 ATP6V0E1O15342 81 aa12.4□□□□□ -0.42
TSPAN4-201ENST00000346501 XRCC3O43542 346 aa12.4□□□□□ -0.42
TSPAN4-201ENST00000346501 IGHG4P01861 327 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms