RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 REC114Q7Z4M0 266 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 MRPL41Q8IXM3 137 aaKnown RBP11.3□□□□□ -0.6
HMGN3-202ENST00000344726 DRAXINQ8NBI3 349 aaPredicted RBP11.3□□□□□ -0.6
HMGN3-202ENST00000344726 KLHL30-AS1Q8NEE0 82 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 OR4A4PQ8NGN8 299 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 MRAPQ8TCY5 172 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 EDARADDQ8WWZ3 215 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 CABLES2Q9BTV7 478 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 TOLLIPQ9H0E2 274 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 ZFP57Q9NU63 452 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 RDH8Q9NYR8 311 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 SSR3Q9UNL2 185 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 IGKV1D-8A0A087WSZ0 117 aa11.29□□□□□ -0.6
HMGN3-202ENST00000344726 OR5H14A6NHG9 310 aa11.29□□□□□ -0.6
HMGN3-202ENST00000344726 GADD45AP24522 165 aa11.29□□□□□ -0.6
HMGN3-202ENST00000344726 SDC2P34741 201 aa11.29□□□□□ -0.6
HMGN3-202ENST00000344726 NDPQ00604 133 aa11.29□□□□□ -0.6
HMGN3-202ENST00000344726 KCTD21Q4G0X4 260 aa11.29□□□□□ -0.6
HMGN3-202ENST00000344726 TPRA1Q86W33 373 aa11.29□□□□□ -0.6
HMGN3-202ENST00000344726 RNF152Q8N8N0 203 aa11.29□□□□□ -0.6
HMGN3-202ENST00000344726 OR5AN1Q8NGI8 311 aa11.29□□□□□ -0.6
HMGN3-202ENST00000344726 C5orf30Q96GV9 206 aa11.29□□□□□ -0.6
HMGN3-202ENST00000344726 KCTD7Q96MP8 289 aa11.29□□□□□ -0.6
HMGN3-202ENST00000344726 DUX3Q96PT4 197 aa11.29□□□□□ -0.6
HMGN3-202ENST00000344726 CHCHD6Q9BRQ6 235 aa11.29□□□□□ -0.6
HMGN3-202ENST00000344726 ATG5Q9H1Y0 275 aa11.29□□□□□ -0.6
HMGN3-202ENST00000344726 DAPK2Q9UIK4 370 aa11.29□□□□□ -0.6
HMGN3-202ENST00000344726 ZNF580Q9UK33 172 aa11.29□□□□□ -0.6
HMGN3-202ENST00000344726 TRBV6-7A0A0A0MS04 114 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 METTL21EPA6NDL7 271 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 NUDT19A8MXV4 375 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 G3V318 75 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 K7EIL1 84 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 BET1O15155 118 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 ATP6V0E1O15342 81 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 RRP9O43818 475 aaKnown RBP11.28□□□□□ -0.6
HMGN3-202ENST00000344726 IGHG4P01861 327 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 PPIFP30405 207 aaKnown RBP11.28□□□□□ -0.6
HMGN3-202ENST00000344726 HOXD3P31249 432 aaPredicted RBP11.28□□□□□ -0.6
HMGN3-202ENST00000344726 MRPS15P82914 257 aaKnown RBP11.28□□□□□ -0.6
HMGN3-202ENST00000344726 MXD1Q05195 221 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 FOXE3Q13461 319 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 SFXN4Q6P4A7 337 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 ZNF695Q8IW36 515 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 ZNF383Q8NA42 475 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 RCC1LQ96I51 464 aaKnown RBP11.28□□□□□ -0.6
HMGN3-202ENST00000344726 P2RX4Q99571 388 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 CENPOQ9BU64 300 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 GON7Q9BXV9 100 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 OR51J1Q9H342 316 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 GHITMQ9H3K2 345 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 FBXL15Q9H469 300 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 FBXO7Q9Y3I1 522 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 WSB1Q9Y6I7 421 aa11.28□□□□□ -0.6
HMGN3-202ENST00000344726 LOC100506127A0A0U1RQW1 187 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 FCN1O00602 326 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 RRHO14718 337 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 IGKV1-16P04430 117 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 ELANEP08246 267 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 CD36P16671 472 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 VDAC1P21796 283 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 PSMB8P28062 276 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 MC5RP33032 325 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 ARFRP1Q13795 201 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 KIR2DS1Q14954 304 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 DEFB136Q30KP8 78 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 CDNFQ49AH0 187 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 CXorf66Q5JRM2 361 aaPredicted RBP11.27□□□□□ -0.61
HMGN3-202ENST00000344726 LIN54Q6MZP7 749 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 LGALS14Q8TCE9 139 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 RAX2Q96IS3 184 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.27□□□□□ -0.61
HMGN3-202ENST00000344726 PARP11Q9NR21 331 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 KIAA1456Q9P272 454 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 ZNF221Q9UK13 617 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 WASHC3Q9Y3C0 194 aa11.27□□□□□ -0.61
HMGN3-202ENST00000344726 COL7A1Q02388 2944 aa11.26□□□□□ -0.61
HMGN3-202ENST00000344726 WI2-2373I1.2A0A1W2PRP0 233 aa11.26□□□□□ -0.61
HMGN3-202ENST00000344726 H7C2Y5 167 aa11.26□□□□□ -0.61
HMGN3-202ENST00000344726 OR8U9P0C7N5 309 aa11.26□□□□□ -0.61
HMGN3-202ENST00000344726 SLC6A1P30531 599 aa11.26□□□□□ -0.61
HMGN3-202ENST00000344726 MYCNOSP40205 109 aa11.26□□□□□ -0.61
HMGN3-202ENST00000344726 CDX1P47902 265 aaPredicted RBP11.26□□□□□ -0.61
HMGN3-202ENST00000344726 SERPINB10P48595 397 aa11.26□□□□□ -0.61
HMGN3-202ENST00000344726 EGFEM1PQ0D2K5 195 aa11.26□□□□□ -0.61
HMGN3-202ENST00000344726 KIAA0141Q14154 515 aaPredicted RBP11.26□□□□□ -0.61
HMGN3-202ENST00000344726 C19orf54Q5BKX5 351 aa11.26□□□□□ -0.61
HMGN3-202ENST00000344726 Q6ZS49 121 aa11.26□□□□□ -0.61
HMGN3-202ENST00000344726 OR5H6Q8NGV6 325 aa11.26□□□□□ -0.61
HMGN3-202ENST00000344726 OR8U1Q8NH10 309 aa11.26□□□□□ -0.61
HMGN3-202ENST00000344726 OR10J5Q8NHC4 309 aa11.26□□□□□ -0.61
HMGN3-202ENST00000344726 MYOZ3Q8TDC0 251 aa11.26□□□□□ -0.61
HMGN3-202ENST00000344726 OR2D2Q9H210 308 aa11.26□□□□□ -0.61
HMGN3-202ENST00000344726 KLK15Q9H2R5 256 aa11.26□□□□□ -0.61
HMGN3-202ENST00000344726 SDHAF2Q9NX18 166 aa11.26□□□□□ -0.61
HMGN3-202ENST00000344726 GAB2Q9UQC2 676 aa11.26□□□□□ -0.61
HMGN3-202ENST00000344726 M0R1X1 148 aa11.25□□□□□ -0.61
HMGN3-202ENST00000344726 RBBP9O75884 186 aa11.25□□□□□ -0.61
HMGN3-202ENST00000344726 DIRAS3O95661 229 aa11.25□□□□□ -0.61
HMGN3-202ENST00000344726 IGLV1-40P01703 118 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms