RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 HIST1H2BDP58876 126 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 HIST1H2BCP62807 126 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 HIST2H2BEQ16778 126 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 MOB1BQ7L9L4 216 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 Q8IYB0 196 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 TMEM251Q8N6I4 163 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 OR10G8Q8NGN5 311 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 TMEM171Q8WVE6 324 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 HIST1H2BHQ93079 126 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 HIST1H2BNQ99877 126 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 HIST1H2BMQ99879 126 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 SLC35D1Q9NTN3 355 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 CHD7Q9P2D1 2997 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 HSBP1O75506 76 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 TMEM11P17152 192 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 ERVFRD-1P60508 538 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 KIAA1644Q3SXP7 199 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 ZNF766Q5HY98 468 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 LINC00469Q8N7U9 141 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 FAM131CQ96AQ9 280 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 TBX15Q96SF7 602 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 PNRC2Q9NPJ4 139 aaKnown RBP10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 CBLN4Q9NTU7 201 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 HSBP1L1C9JCN9 74 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 S1PR2O95136 353 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 GNB1P62873 340 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 HGFACQ04756 655 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 RNPS1Q15287 305 aaKnown RBP10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 LIME1Q9H400 295 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 SMDT1Q9H4I9 107 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 DMRT1Q9Y5R6 373 aa10.61□□□□□ -0.71
SNRNP48-201ENST00000342415 HBZP02008 142 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 TPPP2P59282 170 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 UBE2G1P62253 170 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 SUMO1P63165 101 aaKnown RBP10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 SERF2P84101 59 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 ICAM4Q14773 271 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 PSG5Q15238 335 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 ATP1A1-AS1Q5TC04 95 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 TTTY12Q9BZ98 90 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 DYNLRB1Q9NP97 96 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 K7N7A8 449 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 HOXA5P20719 270 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 MPZP25189 248 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 SOX8P57073 446 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 DRAM1Q8N682 238 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 CUL9Q8IWT3 2517 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 MZT1Q08AG7 82 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 ZIC4Q8N9L1 334 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 OR51G1Q8NGK1 321 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 OR1P1Q8NH06 330 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 C1orf147Q96MC9 270 aaPredicted RBP10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 SSUH2Q9Y2M2 353 aa10.6□□□□□ -0.71
SNRNP48-201ENST00000342415 PGPEP1LA6NFU8 196 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 ZNF253O75346 499 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 SSTR5P35346 364 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 MIC13Q5XKP0 118 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 DNM1P46Q6ZS02 220 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 DNASE2BQ8WZ79 361 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 COLQQ9Y215 455 aaPredicted RBP10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 SNURFLB1AK76 121 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 UBE2CO00762 179 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 GALR2O43603 387 aaPredicted RBP10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 IGHV3-48P01763 117 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 APOA2P02652 100 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 UCP3P55916 312 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 ELOBQ15370 118 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 PYY3Q5JQD4 70 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 ABHD12Q8N2K0 398 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 CLDND2Q8NHS1 167 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 RND1Q92730 232 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 HS3ST6Q96QI5 342 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 ELOVL1Q9BW60 279 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 LOC102723971A0A1B0GUV8 181 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 PMS2P1A4D2B8 440 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 CA11O75493 328 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 FOSL1P15407 271 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 UCP1P25874 307 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 GNG4P50150 75 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 CNN1P51911 297 aaKnown RBP10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 DCAF10Q5QP82 559 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 BLNKQ8WV28 456 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 SLC35E1Q96K37 410 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 C18orf12Q96KH6 178 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 SIGLEC12Q96PQ1 595 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 DCTN5Q9BTE1 182 aa10.59□□□□□ -0.71
SNRNP48-201ENST00000342415 GATCO43716 136 aaKnown RBP10.58□□□□□ -0.71
SNRNP48-201ENST00000342415 UMODP07911 640 aa10.58□□□□□ -0.71
SNRNP48-201ENST00000342415 CSRP1P21291 193 aaKnown RBP10.58□□□□□ -0.71
SNRNP48-201ENST00000342415 CD1BP29016 333 aa10.58□□□□□ -0.71
SNRNP48-201ENST00000342415 KCNMB1Q16558 191 aa10.58□□□□□ -0.71
SNRNP48-201ENST00000342415 ZNF506Q5JVG8 444 aa10.58□□□□□ -0.71
SNRNP48-201ENST00000342415 FBXW9Q5XUX1 488 aa10.58□□□□□ -0.71
SNRNP48-201ENST00000342415 GATAD1Q8WUU5 269 aa10.58□□□□□ -0.71
SNRNP48-201ENST00000342415 CHRNA10Q9GZZ6 450 aa10.58□□□□□ -0.71
SNRNP48-201ENST00000342415 KCNIP2Q9NS61 270 aa10.58□□□□□ -0.71
SNRNP48-201ENST00000342415 ZNF835Q9Y2P0 537 aa10.58□□□□□ -0.71
SNRNP48-201ENST00000342415 ARL2-SNX15V9GYD0 113 aa10.58□□□□□ -0.71
SNRNP48-201ENST00000342415 PCDH15Q96QU1 1955 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms