RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 SNIP1Q8TAD8 396 aaKnown RBP6.11□□□□□ -1.43
PTPRR-202ENST00000342084 MBD3L1Q8WWY6 194 aa6.11□□□□□ -1.43
PTPRR-202ENST00000342084 NANOS1Q8WY41 292 aaKnown RBP6.11□□□□□ -1.43
PTPRR-202ENST00000342084 TAF15Q92804 592 aaKnown RBP eCLIP6.11□□□□□ -1.43
PTPRR-202ENST00000342084 RPUSD4Q96CM3 377 aaKnown RBP6.11□□□□□ -1.43
PTPRR-202ENST00000342084 FAM210BQ96KR6 192 aa6.11□□□□□ -1.43
PTPRR-202ENST00000342084 KLF13Q9Y2Y9 288 aaPredicted RBP6.11□□□□□ -1.43
PTPRR-202ENST00000342084 TRAV1-1A0A0B4J248 108 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 ODAMA1E959 279 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 C21orf140B9A014 251 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 SH2D1BO14796 132 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 ZG16O60844 167 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 ZNF737O75373 536 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 IGHV3-13P01766 116 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 IGHV3-7P01780 117 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 HBZP02008 142 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 ZNF883P0CG24 379 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 CD59P13987 128 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 TUBG1P23258 451 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 CDX1P47902 265 aaPredicted RBP6.1□□□□□ -1.43
PTPRR-202ENST00000342084 CD81P60033 236 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 HBG1P69891 147 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 HBG2P69892 147 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 NKX6-1P78426 367 aaPredicted RBP6.1□□□□□ -1.43
PTPRR-202ENST00000342084 TNFRSF9Q07011 255 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 RTP5Q14D33 572 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 ZNF146Q15072 292 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 ZNF766Q5HY98 468 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 DBX2Q6ZNG2 339 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 MOB1BQ7L9L4 216 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 DEFB123Q8N688 67 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 LHX4Q969G2 390 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 EAF1Q96JC9 268 aaPredicted RBP6.1□□□□□ -1.43
PTPRR-202ENST00000342084 SNX22Q96L94 193 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 GPR87Q9BY21 358 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 SDF2L1Q9HCN8 221 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 SIRT7Q9NRC8 400 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 MBNL3Q9NUK0 354 aaKnown RBP6.1□□□□□ -1.43
PTPRR-202ENST00000342084 VAX2Q9UIW0 290 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 POLDIP2Q9Y2S7 368 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 WIPI2Q9Y4P8 454 aa6.1□□□□□ -1.43
PTPRR-202ENST00000342084 TMEM30CPA0ZSE6 113 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 OR5H1A6NKK0 313 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 KLRC4-KLRK1H3BQV0 150 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 ST8SIA5O15466 376 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 PTBP3O95758 552 aaKnown RBP6.09□□□□□ -1.43
PTPRR-202ENST00000342084 CYB5R3P00387 301 aaPredicted RBP6.09□□□□□ -1.43
PTPRR-202ENST00000342084 FGF7P21781 194 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 COL8A2P25067 703 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 S100PP25815 95 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 S100A2P29034 98 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 IL2RGP31785 369 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 GABRA2P47869 451 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 HES3Q5TGS1 186 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 TMEM14EPQ6UXP3 125 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 C16orf82Q7Z2V1 217 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 C11orf53Q8IXP5 236 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 C1orf87Q8N0U7 546 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 HIST3H2BBQ8N257 126 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 ZNF645Q8N7E2 425 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 FAM169BQ8N8A8 192 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 CNEP1R1Q8N9A8 125 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 KLF14Q8TD94 323 aaPredicted RBP6.09□□□□□ -1.43
PTPRR-202ENST00000342084 COQ2Q96H96 371 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 TRIB1Q96RU8 372 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 PSMG3Q9BT73 122 aaPredicted RBP6.09□□□□□ -1.43
PTPRR-202ENST00000342084 ELOVL1Q9BW60 279 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 FAM234AQ9H0X4 552 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 MSL2Q9HCI7 577 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 SLC39A9Q9NUM3 307 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 GAR1Q9NY12 217 aaKnown RBP6.09□□□□□ -1.43
PTPRR-202ENST00000342084 PRR14LQ5THK1 2151 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 CXorf65A6NEN9 183 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 LINC00473A8K010 186 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 CDX4O14627 284 aaPredicted RBP6.09□□□□□ -1.43
PTPRR-202ENST00000342084 RBMXL2O75526 392 aaKnown RBP6.09□□□□□ -1.43
PTPRR-202ENST00000342084 LY86O95711 162 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 FABP4P15090 132 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 RAC2P15153 192 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 EGR1P18146 543 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 Q3ZCU0 254 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 GCSAMLQ5JQS6 135 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 FFAR4Q5NUL3 377 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 OR5T1Q8NG75 326 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 OR10G4Q8NGN3 311 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 OR13A1Q8NGR1 328 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 GALMQ96C23 342 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 SMIM7Q9BQ49 75 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 HIPK2Q9H2X6 1198 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 TREM2Q9NZC2 230 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 KCNIP1Q9NZI2 227 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 HSPB7Q9UBY9 170 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 GAB2Q9UQC2 676 aa6.09□□□□□ -1.43
PTPRR-202ENST00000342084 LAMA5O15230 3695 aa6.09□□□□□ -1.44
PTPRR-202ENST00000342084 LRRC30A6NM36 301 aa6.08□□□□□ -1.44
PTPRR-202ENST00000342084 PMS2P5A8MQ11 134 aa6.08□□□□□ -1.44
PTPRR-202ENST00000342084 IQCF6A8MYZ5 107 aa6.08□□□□□ -1.44
PTPRR-202ENST00000342084 CLDN34H7C241 214 aa6.08□□□□□ -1.44
PTPRR-202ENST00000342084 SMAD7O15105 426 aaKnown RBP6.08□□□□□ -1.44
PTPRR-202ENST00000342084 CRYAAP02489 173 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms