RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 NEIL1Q96FI4 390 aaPredicted RBP10.21□□□□□ -0.78
CDH5-201ENST00000341529 TXN2Q99757 166 aa10.21□□□□□ -0.78
CDH5-201ENST00000341529 RPRMQ9NS64 109 aa10.21□□□□□ -0.78
CDH5-201ENST00000341529 TRAPPC1Q9Y5R8 145 aa10.21□□□□□ -0.78
CDH5-201ENST00000341529 SONP18583 2426 aaKnown RBP10.21□□□□□ -0.78
CDH5-201ENST00000341529 PCDH15Q96QU1 1955 aa10.21□□□□□ -0.78
CDH5-201ENST00000341529 FUT9Q9Y231 359 aa10.21□□□□□ -0.78
CDH5-201ENST00000341529 SPTBN4Q9H254 2564 aa10.21□□□□□ -0.78
CDH5-201ENST00000341529 IGKV1-27A0A075B6S5 117 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 A0A1B0GU03 582 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 A8MXK9 166 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 HRASP01112 189 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 RBP4P02753 201 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 RPS2P15880 293 aaKnown RBP10.2□□□□□ -0.78
CDH5-201ENST00000341529 FAM3BP58499 235 aaPredicted RBP10.2□□□□□ -0.78
CDH5-201ENST00000341529 PSG5Q15238 335 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 DBX2Q6ZNG2 339 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 ABHD12Q8N2K0 398 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 BORCS7Q96B45 105 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 BOD1Q96IK1 185 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 BTF3L4Q96K17 158 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 ONECUT1Q9UBC0 465 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 TRAV34A0A0B4J273 112 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 NCBP2LA6PVI3 153 aaKnown RBP10.2□□□□□ -0.78
CDH5-201ENST00000341529 CRYABP02511 175 aaKnown RBP10.2□□□□□ -0.78
CDH5-201ENST00000341529 GAPDHP04406 335 aaKnown RBP10.2□□□□□ -0.78
CDH5-201ENST00000341529 NAT2P11245 290 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 PTGDSP41222 190 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 HIST1H3AP68431 136 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 DRAM1Q8N682 238 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 FAM131CQ96AQ9 280 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 SAP30LQ9HAJ7 183 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 NAT8BQ9UHF3 227 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 WIPI2Q9Y4P8 454 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 IL3RAP26951 378 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 SUB1P53999 127 aaKnown RBP eCLIP10.2□□□□□ -0.78
CDH5-201ENST00000341529 SUPT4H1P63272 117 aaKnown RBP10.2□□□□□ -0.78
CDH5-201ENST00000341529 SRSF6Q13247 344 aaKnown RBP10.2□□□□□ -0.78
CDH5-201ENST00000341529 LRRC10Q5BKY1 277 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 INO80CQ6PI98 192 aaPredicted RBP10.2□□□□□ -0.78
CDH5-201ENST00000341529 ZDHHC16Q969W1 377 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 SGK494Q96LW2 274 aa10.2□□□□□ -0.78
CDH5-201ENST00000341529 ANKHD1Q8IWZ3 2542 aaKnown RBP10.2□□□□□ -0.78
CDH5-201ENST00000341529 WNT5AP41221 380 aa10.19□□□□□ -0.78
CDH5-201ENST00000341529 B2MP61769 119 aa10.19□□□□□ -0.78
CDH5-201ENST00000341529 FAM216AQ8WUB2 273 aa10.19□□□□□ -0.78
CDH5-201ENST00000341529 PRDM14Q9GZV8 571 aa10.19□□□□□ -0.78
CDH5-201ENST00000341529 CHD8Q9HCK8 2581 aa10.19□□□□□ -0.78
CDH5-201ENST00000341529 ZNF716A6NP11 495 aa10.19□□□□□ -0.78
CDH5-201ENST00000341529 TAS2R45P59539 299 aa10.19□□□□□ -0.78
CDH5-201ENST00000341529 IFT22Q9H7X7 185 aa10.19□□□□□ -0.78
CDH5-201ENST00000341529 OR6C3Q9NZP0 311 aa10.19□□□□□ -0.78
CDH5-201ENST00000341529 TRBV23-1A0A0A0MS06 115 aa10.19□□□□□ -0.78
CDH5-201ENST00000341529 TGIF2-C20orf24A0A0A6YYL0 155 aa10.19□□□□□ -0.78
CDH5-201ENST00000341529 LRRC3CA6NJW4 275 aa10.19□□□□□ -0.78
CDH5-201ENST00000341529 PPIHO43447 177 aaKnown RBP10.19□□□□□ -0.78
CDH5-201ENST00000341529 CYB5R3P00387 301 aaPredicted RBP10.19□□□□□ -0.78
CDH5-201ENST00000341529 GZMHP20718 246 aa10.19□□□□□ -0.78
CDH5-201ENST00000341529 KIAA1456Q9P272 454 aa10.19□□□□□ -0.78
CDH5-201ENST00000341529 H0Y980 276 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 RPL31P62899 125 aaKnown RBP10.18□□□□□ -0.78
CDH5-201ENST00000341529 HOXA4Q00056 320 aaPredicted RBP10.18□□□□□ -0.78
CDH5-201ENST00000341529 MIC13Q5XKP0 118 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 FAM166AQ6J272 317 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 MRPL54Q6P161 138 aaKnown RBP10.18□□□□□ -0.78
CDH5-201ENST00000341529 SLC35E3Q7Z769 313 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 OR4S2Q8NH73 311 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 WBP1Q96G27 269 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 LURAP1Q96LR2 239 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 HARBI1Q96MB7 349 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 AP1S3Q96PC3 154 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 RBKSQ9H477 322 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 VAX2Q9UIW0 290 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 LILRA1O75019 489 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 PSG7Q13046 419 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 TOMM20LQ6UXN7 152 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 TMEM18Q96B42 140 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 hADV38S2A0JD32 116 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 FCN1O00602 326 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 PITX3O75364 302 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 NDUFB4O95168 129 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 MPV17P39210 176 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 HGFACQ04756 655 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 OR2T10Q8NGZ9 312 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 REPIN1Q9BWE0 567 aaKnown RBP10.18□□□□□ -0.78
CDH5-201ENST00000341529 LYRM2Q9NU23 88 aaPredicted RBP10.18□□□□□ -0.78
CDH5-201ENST00000341529 H3BTX0 84 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 NEURL1O76050 574 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 FAM157CP0CG43 387 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 BCL2P10415 239 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 Q0VFX4 171 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 TNXAQ16473 311 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 RPL39P5Q59GN2 51 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 GPR61Q9BZJ8 451 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 LPAR2Q9HBW0 351 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 RNF7Q9UBF6 113 aa10.18□□□□□ -0.78
CDH5-201ENST00000341529 PCNX3Q9H6A9 2034 aa10.17□□□□□ -0.78
CDH5-201ENST00000341529 LOC390937A0A1W2PQ73 354 aa10.17□□□□□ -0.78
CDH5-201ENST00000341529 DANCRP0C864 163 aa10.17□□□□□ -0.78
CDH5-201ENST00000341529 PRB4P10163 310 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms