RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 LRRC37A5PQ49AS3 106 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 ZNF66Q6ZN08 573 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 LY6G5BQ8NDX9 201 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 MARVELD3Q96A59 401 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 HSD17B10Q99714 261 aaKnown RBP12.04□□□□□ -0.48
CBX3-201ENST00000337620 GSKIPQ9P0R6 139 aa12.04□□□□□ -0.48
CBX3-201ENST00000337620 SAA2-SAA4A0A096LPE2 208 aa12.03□□□□□ -0.48
CBX3-201ENST00000337620 LINC00473A8K010 186 aa12.03□□□□□ -0.48
CBX3-201ENST00000337620 G3V3Q6 166 aa12.03□□□□□ -0.48
CBX3-201ENST00000337620 SAA2P0DJI9 122 aaPredicted RBP12.03□□□□□ -0.48
CBX3-201ENST00000337620 ZFP36P26651 326 aaKnown RBP12.03□□□□□ -0.48
CBX3-201ENST00000337620 DLX1P56177 255 aa12.03□□□□□ -0.48
CBX3-201ENST00000337620 SRSF4Q08170 494 aaKnown RBP12.03□□□□□ -0.48
CBX3-201ENST00000337620 IAH1Q2TAA2 248 aaPredicted RBP12.03□□□□□ -0.48
CBX3-201ENST00000337620 OR11H4Q8NGC9 324 aa12.03□□□□□ -0.48
CBX3-201ENST00000337620 C10orf105Q8TEF2 133 aa12.03□□□□□ -0.48
CBX3-201ENST00000337620 RBPMSQ93062 196 aaKnown RBP12.03□□□□□ -0.48
CBX3-201ENST00000337620 HYLS1Q96M11 299 aa12.03□□□□□ -0.48
CBX3-201ENST00000337620 SESN1Q9Y6P5 492 aa12.03□□□□□ -0.48
CBX3-201ENST00000337620 ARHGAP32A7KAX9 2087 aa12.03□□□□□ -0.48
CBX3-201ENST00000337620 hCG_1809904A0A1W2PP81 198 aa12.02□□□□□ -0.48
CBX3-201ENST00000337620 A0A1W2PPE2 198 aa12.02□□□□□ -0.48
CBX3-201ENST00000337620 A0A1W2PR64 198 aa12.02□□□□□ -0.48
CBX3-201ENST00000337620 A0A1W2PRV1 198 aa12.02□□□□□ -0.48
CBX3-201ENST00000337620 LMO4P61968 165 aa12.02□□□□□ -0.48
CBX3-201ENST00000337620 ARF6P62330 175 aa12.02□□□□□ -0.48
CBX3-201ENST00000337620 LCN2P80188 198 aa12.02□□□□□ -0.48
CBX3-201ENST00000337620 PRB3Q04118 309 aaPredicted RBP12.02□□□□□ -0.48
CBX3-201ENST00000337620 HIST2H2BCQ6DN03 193 aa12.02□□□□□ -0.48
CBX3-201ENST00000337620 C1orf229Q6ZS94 237 aaPredicted RBP12.02□□□□□ -0.48
CBX3-201ENST00000337620 ODF3L1Q8IXM7 274 aa12.02□□□□□ -0.48
CBX3-201ENST00000337620 ABHD12Q8N2K0 398 aa12.02□□□□□ -0.48
CBX3-201ENST00000337620 PPP1R1CQ8WVI7 109 aa12.02□□□□□ -0.48
CBX3-201ENST00000337620 C2orf50Q96LR7 162 aa12.02□□□□□ -0.48
CBX3-201ENST00000337620 TMEM133Q9H2Q1 129 aa12.02□□□□□ -0.48
CBX3-201ENST00000337620 COMMD9Q9P000 198 aa12.02□□□□□ -0.48
CBX3-201ENST00000337620 CSMD2Q7Z408 3487 aa12.02□□□□□ -0.49
CBX3-201ENST00000337620 NDUFS8O00217 210 aa12.02□□□□□ -0.49
CBX3-201ENST00000337620 RAMP3O60896 148 aa12.02□□□□□ -0.49
CBX3-201ENST00000337620 DUTP33316 252 aaKnown RBP12.02□□□□□ -0.49
CBX3-201ENST00000337620 CYCSP99999 105 aaKnown RBP12.02□□□□□ -0.49
CBX3-201ENST00000337620 ZNF585BQ52M93 769 aa12.02□□□□□ -0.49
CBX3-201ENST00000337620 SPAG16Q8N0X2 631 aa12.02□□□□□ -0.49
CBX3-201ENST00000337620 NMES1Q9C002 83 aa12.02□□□□□ -0.49
CBX3-201ENST00000337620 GAB2Q9UQC2 676 aa12.02□□□□□ -0.49
CBX3-201ENST00000337620 TMED3Q9Y3Q3 217 aa12.02□□□□□ -0.49
CBX3-201ENST00000337620 J3QR06 171 aa12.01□□□□□ -0.49
CBX3-201ENST00000337620 LPAR6P43657 344 aa12.01□□□□□ -0.49
CBX3-201ENST00000337620 ZNF816Q0VGE8 651 aaPredicted RBP12.01□□□□□ -0.49
CBX3-201ENST00000337620 NCR3LG1Q68D85 454 aa12.01□□□□□ -0.49
CBX3-201ENST00000337620 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.01□□□□□ -0.49
CBX3-201ENST00000337620 OR10X1Q8NGY0 326 aa12.01□□□□□ -0.49
CBX3-201ENST00000337620 GRPEL2Q8TAA5 225 aa12.01□□□□□ -0.49
CBX3-201ENST00000337620 IL22RA2Q969J5 263 aa12.01□□□□□ -0.49
CBX3-201ENST00000337620 S1PR3Q99500 378 aa12.01□□□□□ -0.49
CBX3-201ENST00000337620 GSX2Q9BZM3 304 aa12.01□□□□□ -0.49
CBX3-201ENST00000337620 IGHV4-30-2A0A087WSY4 118 aa12.01□□□□□ -0.49
CBX3-201ENST00000337620 KIAA1324LA8MWY0 1029 aaPredicted RBP12.01□□□□□ -0.49
CBX3-201ENST00000337620 TOR1AO14656 332 aa12.01□□□□□ -0.49
CBX3-201ENST00000337620 PAX1P15863 534 aa12.01□□□□□ -0.49
CBX3-201ENST00000337620 FGL1Q08830 312 aa12.01□□□□□ -0.49
CBX3-201ENST00000337620 FAM219AQ8IW50 185 aa12.01□□□□□ -0.49
CBX3-201ENST00000337620 OR9G1Q8NH87 305 aa12.01□□□□□ -0.49
CBX3-201ENST00000337620 ZNF251Q9BRH9 671 aa12.01□□□□□ -0.49
CBX3-201ENST00000337620 MAP1AP78559 2803 aaPredicted RBP12□□□□□ -0.49
CBX3-201ENST00000337620 A0A087X0M5 115 aa12□□□□□ -0.49
CBX3-201ENST00000337620 A0A1B0GX30 115 aa12□□□□□ -0.49
CBX3-201ENST00000337620 IGKV1-39P01597 117 aa12□□□□□ -0.49
CBX3-201ENST00000337620 RBP4P02753 201 aa12□□□□□ -0.49
CBX3-201ENST00000337620 IGKV1D-39P04432 117 aa12□□□□□ -0.49
CBX3-201ENST00000337620 BRWD1-AS2P59051 145 aa12□□□□□ -0.49
CBX3-201ENST00000337620 RNASE11Q8TAA1 199 aaKnown RBP12□□□□□ -0.49
CBX3-201ENST00000337620 NBPF19A0A087WUL8 3843 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 FXYD6-FXYD2A0A087WZ82 144 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 TRAV14DV4A0A0A6YYC5 116 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 IGHV2-26A0A0B4J1V2 119 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 IGHV4-61A0A0C4DH41 118 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 DUXBA0A1W2PPF3 345 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 VWC2LB2RUY7 222 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 VDAC1P21796 283 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 COX7A1P24310 79 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 PSMB6P28072 239 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 TCTEX1D1Q8N7M0 179 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 Q8N7P7 452 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 C8orf31Q8N9H6 132 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 ZBTB8BQ8NAP8 495 aaPredicted RBP11.99□□□□□ -0.49
CBX3-201ENST00000337620 PRELID3BQ9Y3B1 194 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 PTPN13Q12923 2485 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 POLQO75417 2590 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 PIGBOS1A0A0B4J2F0 54 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 ENSAO43768 121 aaKnown RBP11.99□□□□□ -0.49
CBX3-201ENST00000337620 FCGR3BO75015 233 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 MPC2O95563 127 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 RPA2P15927 270 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 AKR1C2P52895 323 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 LINC00311Q8N616 119 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 SIRT7Q9NRC8 400 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 BOLA1Q9Y3E2 137 aa11.99□□□□□ -0.49
CBX3-201ENST00000337620 GCN1Q92616 2671 aaKnown RBP11.99□□□□□ -0.49
CBX3-201ENST00000337620 MED13LQ71F56 2210 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms