RNA–Protein interactions for RNA: ENST00000337304.2

ATF4-201, Transcript of activating transcription factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF4, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4-201ENST00000337304 SPIN2AQ99865 258 aa21.39■■□□□ 1.02
ATF4-201ENST00000337304 SPIN2BQ9BPZ2 258 aa21.39■■□□□ 1.02
ATF4-201ENST00000337304 LSM5Q9Y4Y9 91 aaKnown RBP21.39■■□□□ 1.02
ATF4-201ENST00000337304 A0A0G2JRQ6 117 aa21.39■■□□□ 1.01
ATF4-201ENST00000337304 PPIHO43447 177 aaKnown RBP21.39■■□□□ 1.01
ATF4-201ENST00000337304 DEDDO75618 318 aa21.39■■□□□ 1.01
ATF4-201ENST00000337304 LINC00205P59089 165 aa21.39■■□□□ 1.01
ATF4-201ENST00000337304 TEX261Q6UWH6 196 aa21.39■■□□□ 1.01
ATF4-201ENST00000337304 TIMD4Q96H15 378 aa21.39■■□□□ 1.01
ATF4-201ENST00000337304 CHODLQ9H9P2 273 aa21.39■■□□□ 1.01
ATF4-201ENST00000337304 U3KQ87 197 aa21.39■■□□□ 1.01
ATF4-201ENST00000337304 K7EPK0 472 aa21.38■■□□□ 1.01
ATF4-201ENST00000337304 RAMP3O60896 148 aa21.38■■□□□ 1.01
ATF4-201ENST00000337304 OR2B11Q5JQS5 317 aa21.38■■□□□ 1.01
ATF4-201ENST00000337304 FAM71E2Q8N5Q1 922 aa21.38■■□□□ 1.01
ATF4-201ENST00000337304 GAB2Q9UQC2 676 aa21.38■■□□□ 1.01
ATF4-201ENST00000337304 C17orf98A8MV24 154 aa21.38■■□□□ 1.01
ATF4-201ENST00000337304 NDUFS7O75251 213 aa21.38■■□□□ 1.01
ATF4-201ENST00000337304 LPAR6P43657 344 aa21.38■■□□□ 1.01
ATF4-201ENST00000337304 RPL39P5Q59GN2 51 aa21.38■■□□□ 1.01
ATF4-201ENST00000337304 IGKV1-5P01602 117 aa21.37■■□□□ 1.01
ATF4-201ENST00000337304 DUTP33316 252 aaKnown RBP21.37■■□□□ 1.01
ATF4-201ENST00000337304 GNG10P50151 68 aa21.37■■□□□ 1.01
ATF4-201ENST00000337304 DLX6P56179 175 aa21.37■■□□□ 1.01
ATF4-201ENST00000337304 SMCO1Q147U7 214 aa21.37■■□□□ 1.01
ATF4-201ENST00000337304 TMEM155Q4W5P6 130 aa21.37■■□□□ 1.01
ATF4-201ENST00000337304 TCTEX1D1Q8N7M0 179 aa21.37■■□□□ 1.01
ATF4-201ENST00000337304 LSM10Q969L4 123 aaKnown RBP21.37■■□□□ 1.01
ATF4-201ENST00000337304 GPR146Q96CH1 333 aa21.37■■□□□ 1.01
ATF4-201ENST00000337304 MYO18BQ8IUG5 2567 aa21.36■■□□□ 1.01
ATF4-201ENST00000337304 TRBV23-1A0A0A0MS06 115 aa21.36■■□□□ 1.01
ATF4-201ENST00000337304 F12P00748 615 aaPredicted RBP21.36■■□□□ 1.01
ATF4-201ENST00000337304 RLN2P04090 185 aa21.36■■□□□ 1.01
ATF4-201ENST00000337304 C1orf229Q6ZS94 237 aaPredicted RBP21.36■■□□□ 1.01
ATF4-201ENST00000337304 ODF3L1Q8IXM7 274 aa21.36■■□□□ 1.01
ATF4-201ENST00000337304 SPAG16Q8N0X2 631 aa21.36■■□□□ 1.01
ATF4-201ENST00000337304 SPOCK3Q9BQ16 436 aa21.36■■□□□ 1.01
ATF4-201ENST00000337304 FAM212BQ9NTI7 297 aaPredicted RBP21.36■■□□□ 1.01
ATF4-201ENST00000337304 MIOXQ9UGB7 285 aa21.36■■□□□ 1.01
ATF4-201ENST00000337304 MSGN1A6NI15 193 aa21.36■■□□□ 1.01
ATF4-201ENST00000337304 SRSF1Q07955 248 aaKnown RBP eCLIP21.36■■□□□ 1.013e-7■□□□□ 9.5
ATF4-201ENST00000337304 THOC7Q6I9Y2 204 aaKnown RBP21.36■■□□□ 1.01
ATF4-201ENST00000337304 ZFP57Q9NU63 452 aa21.36■■□□□ 1.01
ATF4-201ENST00000337304 COL12A1Q99715 3063 aa21.35■■□□□ 1.01
ATF4-201ENST00000337304 M0R1X1 148 aa21.35■■□□□ 1.01
ATF4-201ENST00000337304 ST8SIA3O43173 380 aa21.35■■□□□ 1.01
ATF4-201ENST00000337304 TMEM33P57088 247 aa21.35■■□□□ 1.01
ATF4-201ENST00000337304 NCR3LG1Q68D85 454 aa21.35■■□□□ 1.01
ATF4-201ENST00000337304 SLC25A48Q6ZT89 311 aaKnown RBP21.35■■□□□ 1.01
ATF4-201ENST00000337304 ZNF767PQ75MW2 155 aa21.35■■□□□ 1.01
ATF4-201ENST00000337304 ZNF680Q8NEM1 530 aa21.35■■□□□ 1.01
ATF4-201ENST00000337304 POMT1Q9Y6A1 747 aa21.35■■□□□ 1.01
ATF4-201ENST00000337304 SPTAN1Q13813 2472 aaKnown RBP21.35■■□□□ 1.01
ATF4-201ENST00000337304 CFDP00746 253 aaPredicted RBP21.34■■□□□ 1.01
ATF4-201ENST00000337304 SLC25A6P12236 298 aa21.34■■□□□ 1.01
ATF4-201ENST00000337304 AKR1C2P52895 323 aa21.34■■□□□ 1.01
ATF4-201ENST00000337304 TLE4Q04727 773 aa21.34■■□□□ 1.01
ATF4-201ENST00000337304 ZNF816Q0VGE8 651 aaPredicted RBP21.34■■□□□ 1.01
ATF4-201ENST00000337304 ZNF436-AS1Q8NC38 126 aaPredicted RBP21.34■■□□□ 1.01
ATF4-201ENST00000337304 OR8B3Q8NGG8 313 aa21.34■■□□□ 1.01
ATF4-201ENST00000337304 RNASE11Q8TAA1 199 aaKnown RBP21.34■■□□□ 1.01
ATF4-201ENST00000337304 NEIL1Q96FI4 390 aaPredicted RBP21.34■■□□□ 1.01
ATF4-201ENST00000337304 OR8B2Q96RD0 313 aa21.34■■□□□ 1.01
ATF4-201ENST00000337304 SAA2-SAA4A0A096LPE2 208 aa21.34■■□□□ 1.01
ATF4-201ENST00000337304 RAB29O14966 203 aa21.34■■□□□ 1.01
ATF4-201ENST00000337304 GPR37O15354 613 aa21.34■■□□□ 1.01
ATF4-201ENST00000337304 SAA2P0DJI9 122 aaPredicted RBP21.34■■□□□ 1.01
ATF4-201ENST00000337304 EPHA1P21709 976 aa21.34■■□□□ 1.01
ATF4-201ENST00000337304 IZUMO4Q1ZYL8 232 aa21.34■■□□□ 1.01
ATF4-201ENST00000337304 AQP10Q96PS8 301 aa21.34■■□□□ 1.01
ATF4-201ENST00000337304 ZNF251Q9BRH9 671 aa21.34■■□□□ 1.01
ATF4-201ENST00000337304 MALRD1Q5VYJ5 2156 aa21.33■■□□□ 1.01
ATF4-201ENST00000337304 A0A1B0GU03 582 aa21.33■■□□□ 1.01
ATF4-201ENST00000337304 NKX2-1P43699 371 aaPredicted RBP21.33■■□□□ 1.01
ATF4-201ENST00000337304 EFNA4P52798 201 aa21.33■■□□□ 1.01
ATF4-201ENST00000337304 Q6ZRM9 215 aa21.33■■□□□ 1.01
ATF4-201ENST00000337304 LYG1Q8N1E2 194 aa21.33■■□□□ 1.01
ATF4-201ENST00000337304 OVOL3O00110 214 aa21.33■■□□□ 1
ATF4-201ENST00000337304 BCL2L11O43521 198 aa21.33■■□□□ 1
ATF4-201ENST00000337304 PITX3O75364 302 aa21.33■■□□□ 1
ATF4-201ENST00000337304 S1PR2O95136 353 aa21.33■■□□□ 1
ATF4-201ENST00000337304 NUP62P37198 522 aaPredicted RBP21.33■■□□□ 1
ATF4-201ENST00000337304 CXorf66Q5JRM2 361 aaPredicted RBP21.33■■□□□ 1
ATF4-201ENST00000337304 WDR25Q64LD2 544 aaPredicted RBP21.33■■□□□ 1
ATF4-201ENST00000337304 RCL1Q9Y2P8 373 aaKnown RBP21.33■■□□□ 1
ATF4-201ENST00000337304 KANTRA0A1W2PQU2 76 aa21.32■■□□□ 1
ATF4-201ENST00000337304 C11orf42Q8N5U0 333 aa21.32■■□□□ 1
ATF4-201ENST00000337304 ZNRD1Q9P1U0 126 aa21.32■■□□□ 1
ATF4-201ENST00000337304 UBR5O95071 2799 aaPredicted RBP21.31■■□□□ 1
ATF4-201ENST00000337304 E5RGE8 158 aa21.31■■□□□ 1
ATF4-201ENST00000337304 HKR1P10072 659 aa21.31■■□□□ 1
ATF4-201ENST00000337304 ID3Q02535 119 aa21.31■■□□□ 1
ATF4-201ENST00000337304 EXOSC2Q13868 293 aaKnown RBP21.31■■□□□ 1
ATF4-201ENST00000337304 DMBX1Q8NFW5 382 aa21.31■■□□□ 1
ATF4-201ENST00000337304 NSG2Q9Y328 171 aa21.31■■□□□ 1
ATF4-201ENST00000337304 SLC51BQ86UW2 128 aa21.31■■□□□ 1
ATF4-201ENST00000337304 CD300LFQ8TDQ1 290 aa21.31■■□□□ 1
ATF4-201ENST00000337304 RAB39BQ96DA2 213 aa21.31■■□□□ 1
ATF4-201ENST00000337304 CACNG5Q9UF02 275 aa21.31■■□□□ 1
ATF4-201ENST00000337304 POLR2GP62487 172 aaKnown RBP eCLIP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms