RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 TRAV1-1A0A0B4J248 108 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 C17orf98A8MV24 154 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 DEFB108AA8MXU0 73 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 AP4M1O00189 453 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 SELLP14151 372 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 FABP6P51161 128 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 MRPL49Q13405 166 aaKnown RBP11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 SPINK9Q5DT21 86 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 WDR61Q9GZS3 305 aaKnown RBP11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 CLCF1Q9UBD9 225 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 CLN8Q9UBY8 286 aa11.26□□□□□ -0.61
TUBA1B-201ENST00000332858 NDUFS6O75380 124 aaKnown RBP11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 PTBP3O95758 552 aaKnown RBP11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 CLDN1O95832 211 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 HBZP02008 142 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 HBE1P02100 147 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 SSTR5P35346 364 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 CD200P41217 278 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 TGFBR3Q03167 851 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 FOXF2Q12947 444 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 TM4SF20Q53R12 229 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 FAM214BQ7L5A3 538 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 SNIP1Q8TAD8 396 aaKnown RBP11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 PLPPR2Q96GM1 343 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 HES4Q9HCC6 221 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 NIT2Q9NQR4 276 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 ST8SIA5O15466 376 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 PPIHO43447 177 aaKnown RBP11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 S1PR2O95136 353 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 GLIPR1P48060 266 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 TNFRSF9Q07011 255 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 DPPA3Q6W0C5 159 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 RPP25LQ8N5L8 163 aaKnown RBP11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 FDCSPQ8NFU4 85 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 ZDHHC16Q969W1 377 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 GALMQ96C23 342 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 KALRNO60229 2985 aa11.25□□□□□ -0.61
TUBA1B-201ENST00000332858 IFITM10A6NMD0 228 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 C1QTNF9BB2RNN3 333 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 BCL2P10415 239 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 DEFA4P12838 97 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 RAB2AP61019 212 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 WDR31Q8NA23 367 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 TMEM178AQ8NBL3 297 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 CA5BP1Q8WTZ4 195 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 SSX3Q99909 188 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 TMPRSS5Q9H3S3 457 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 LINC00587B1AMM8 73 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 WT1P19544 449 aaPredicted RBP11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 IL2RGP31785 369 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 KIR2DL2P43627 348 aaPredicted RBP11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 GABRA2P47869 451 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 SLC38A11Q08AI6 406 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 KIAA0141Q14154 515 aaPredicted RBP11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 Q6ZT83 130 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 C1QL4Q86Z23 238 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 ZNF645Q8N7E2 425 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 MBD3L1Q8WWY6 194 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 TAF15Q92804 592 aaKnown RBP eCLIP11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 GVINP1Q7Z2Y8 2422 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 AKAP13Q12802 2813 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 ODAMA1E959 279 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 OR5H1A6NKK0 313 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 IFNA17P01571 189 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 HBG1P69891 147 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 HBG2P69892 147 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 EIF4EBP1Q13541 118 aaPredicted RBP11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 ZNF674Q2M3X9 581 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 C9orf106Q8NAJ2 232 aa11.24□□□□□ -0.61
TUBA1B-201ENST00000332858 A0A087WWC5 75 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 TMEM30CPA0ZSE6 113 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 LINC00473A8K010 186 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 S100A8P05109 93 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 SMIM6P0DI80 62 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 WDR82Q6UXN9 313 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 TMEM14EPQ6UXP3 125 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 OR13A1Q8NGR1 328 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 GSN-AS1Q9NRJ2 163 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 CISD1Q9NZ45 108 aaKnown RBP11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 KCNIP1Q9NZI2 227 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 BSNQ9UPA5 3926 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 PLCE1Q9P212 2302 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 J3QW42 95 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 CYB5BO43169 146 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 ZG16O60844 167 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 P0C879 139 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 HOXB1P14653 301 aaPredicted RBP11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 LTC4SQ16873 150 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 ACSM6Q6P461 480 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 ACP7Q6ZNF0 438 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 SLC35E3Q7Z769 313 aa11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 PSMG3Q9BT73 122 aaPredicted RBP11.23□□□□□ -0.61
TUBA1B-201ENST00000332858 CEBPZOSA8MTT3 80 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 IGKV3-15P01624 115 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 RELQ04864 619 aaPredicted RBP11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 GUSBP1Q15486 140 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 SPNS3Q6ZMD2 512 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 DOK5Q9P104 306 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 HSPB7Q9UBY9 170 aa11.22□□□□□ -0.61
TUBA1B-201ENST00000332858 MAP1LC3B2A6NCE7 125 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms