RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 HES5Q5TA89 166 aa13.86□□□□□ -0.19
TPM1-203ENST00000317516 OR11H1Q8NG94 326 aa13.86□□□□□ -0.19
TPM1-203ENST00000317516 RAB3CQ96E17 227 aa13.86□□□□□ -0.19
TPM1-203ENST00000317516 RNF150Q9ULK6 438 aa13.86□□□□□ -0.19
TPM1-203ENST00000317516 TMEM272A0A1B0GTI8 110 aa13.85□□□□□ -0.19
TPM1-203ENST00000317516 LDLRAD4O15165 306 aa13.85□□□□□ -0.19
TPM1-203ENST00000317516 MRPS14O60783 128 aaKnown RBP13.85□□□□□ -0.19
TPM1-203ENST00000317516 RAB9AP51151 201 aa13.85□□□□□ -0.19
TPM1-203ENST00000317516 CX3CL1P78423 397 aa13.85□□□□□ -0.19
TPM1-203ENST00000317516 PLAC9Q5JTB6 97 aa13.85□□□□□ -0.19
TPM1-203ENST00000317516 GLDNQ6ZMI3 551 aaPredicted RBP13.85□□□□□ -0.19
TPM1-203ENST00000317516 TCTEX1D1Q8N7M0 179 aa13.85□□□□□ -0.19
TPM1-203ENST00000317516 ZNF491Q8N8L2 437 aa13.85□□□□□ -0.19
TPM1-203ENST00000317516 MINDY2Q8NBR6 621 aa13.85□□□□□ -0.19
TPM1-203ENST00000317516 OR4A4PQ8NGN8 299 aa13.85□□□□□ -0.19
TPM1-203ENST00000317516 OR1N2Q8NGR9 330 aa13.85□□□□□ -0.19
TPM1-203ENST00000317516 MYOZ3Q8TDC0 251 aa13.85□□□□□ -0.19
TPM1-203ENST00000317516 CENPOQ9BU64 300 aa13.85□□□□□ -0.19
TPM1-203ENST00000317516 PARP12Q9H0J9 701 aaKnown RBP13.85□□□□□ -0.19
TPM1-203ENST00000317516 KLK15Q9H2R5 256 aa13.85□□□□□ -0.19
TPM1-203ENST00000317516 FBXL15Q9H469 300 aa13.85□□□□□ -0.19
TPM1-203ENST00000317516 TRDV1A0A1B0GX56 115 aa13.84□□□□□ -0.19
TPM1-203ENST00000317516 METTL21EPA6NDL7 271 aa13.84□□□□□ -0.19
TPM1-203ENST00000317516 IFITM5A6NNB3 132 aa13.84□□□□□ -0.19
TPM1-203ENST00000317516 SEC14L6B5MCN3 397 aa13.84□□□□□ -0.19
TPM1-203ENST00000317516 OR8U8P0C7N1 319 aa13.84□□□□□ -0.19
TPM1-203ENST00000317516 GALP22466 123 aa13.84□□□□□ -0.19
TPM1-203ENST00000317516 CD40LGP29965 261 aa13.84□□□□□ -0.19
TPM1-203ENST00000317516 RUNX1Q01196 453 aa13.84□□□□□ -0.19
TPM1-203ENST00000317516 CD69Q07108 199 aa13.84□□□□□ -0.19
TPM1-203ENST00000317516 SSX1Q16384 188 aa13.84□□□□□ -0.19
TPM1-203ENST00000317516 CD200R1LQ6Q8B3 271 aa13.84□□□□□ -0.19
TPM1-203ENST00000317516 ABHD5Q8WTS1 349 aa13.84□□□□□ -0.19
TPM1-203ENST00000317516 TSNAXQ99598 290 aaKnown RBP13.84□□□□□ -0.19
TPM1-203ENST00000317516 NDUFB11Q9NX14 153 aa13.84□□□□□ -0.19
TPM1-203ENST00000317516 RDH8Q9NYR8 311 aa13.84□□□□□ -0.19
TPM1-203ENST00000317516 FABP7O15540 132 aa13.83□□□□□ -0.2
TPM1-203ENST00000317516 APOA2P02652 100 aa13.83□□□□□ -0.2
TPM1-203ENST00000317516 TFAP2AP05549 437 aa13.83□□□□□ -0.2
TPM1-203ENST00000317516 RAB3BP20337 219 aa13.83□□□□□ -0.2
TPM1-203ENST00000317516 RAB6AP20340 208 aa13.83□□□□□ -0.2
TPM1-203ENST00000317516 CRIP2P52943 208 aaPredicted RBP13.83□□□□□ -0.2
TPM1-203ENST00000317516 RPS16P62249 146 aaKnown RBP13.83□□□□□ -0.2
TPM1-203ENST00000317516 ZNF616Q08AN1 781 aa13.83□□□□□ -0.2
TPM1-203ENST00000317516 FHL3Q13643 280 aa13.83□□□□□ -0.2
TPM1-203ENST00000317516 KIAA0141Q14154 515 aaPredicted RBP13.83□□□□□ -0.2
TPM1-203ENST00000317516 ECSCRQ19T08 205 aa13.83□□□□□ -0.2
TPM1-203ENST00000317516 ZNF562Q6V9R5 426 aa13.83□□□□□ -0.2
TPM1-203ENST00000317516 DRAXINQ8NBI3 349 aaPredicted RBP13.83□□□□□ -0.2
TPM1-203ENST00000317516 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.83□□□□□ -0.2
TPM1-203ENST00000317516 OR10R2Q8NGX6 335 aa13.83□□□□□ -0.2
TPM1-203ENST00000317516 FOXA2Q9Y261 457 aaPredicted RBP13.83□□□□□ -0.2
TPM1-203ENST00000317516 A0A1W2PN81 502 aa13.82□□□□□ -0.2
TPM1-203ENST00000317516 I3L521 148 aa13.82□□□□□ -0.2
TPM1-203ENST00000317516 SPDEFO95238 335 aa13.82□□□□□ -0.2
TPM1-203ENST00000317516 CHRNA7P36544 502 aa13.82□□□□□ -0.2
TPM1-203ENST00000317516 TALDO1P37837 337 aa13.82□□□□□ -0.2
TPM1-203ENST00000317516 INSL3P51460 131 aa13.82□□□□□ -0.2
TPM1-203ENST00000317516 GABARAPL2P60520 117 aa13.82□□□□□ -0.2
TPM1-203ENST00000317516 ARL6IP1Q15041 203 aa13.82□□□□□ -0.2
TPM1-203ENST00000317516 VAX1Q5SQQ9 334 aa13.82□□□□□ -0.2
TPM1-203ENST00000317516 PYHIN1Q6K0P9 492 aa13.82□□□□□ -0.2
TPM1-203ENST00000317516 PDPNQ86YL7 162 aa13.82□□□□□ -0.2
TPM1-203ENST00000317516 OR10J5Q8NHC4 309 aa13.82□□□□□ -0.2
TPM1-203ENST00000317516 FLYWCH2Q96CP2 140 aaKnown RBP13.82□□□□□ -0.2
TPM1-203ENST00000317516 TOLLIPQ9H0E2 274 aa13.82□□□□□ -0.2
TPM1-203ENST00000317516 Q9H521 79 aa13.82□□□□□ -0.2
TPM1-203ENST00000317516 GNB4Q9HAV0 340 aa13.82□□□□□ -0.2
TPM1-203ENST00000317516 METTL1Q9UBP6 276 aaKnown RBP13.82□□□□□ -0.2
TPM1-203ENST00000317516 NUBP2Q9Y5Y2 271 aa13.82□□□□□ -0.2
TPM1-203ENST00000317516 IGKV1-6A0A0C4DH72 117 aa13.81□□□□□ -0.2
TPM1-203ENST00000317516 FCN1O00602 326 aa13.81□□□□□ -0.2
TPM1-203ENST00000317516 BET1O15155 118 aa13.81□□□□□ -0.2
TPM1-203ENST00000317516 PROP1O75360 226 aa13.81□□□□□ -0.2
TPM1-203ENST00000317516 DIRAS3O95661 229 aa13.81□□□□□ -0.2
TPM1-203ENST00000317516 FCGR3AP08637 254 aa13.81□□□□□ -0.2
TPM1-203ENST00000317516 LUMP51884 338 aaPredicted RBP13.81□□□□□ -0.2
TPM1-203ENST00000317516 OR10A3P58181 314 aa13.81□□□□□ -0.2
TPM1-203ENST00000317516 PSG5Q15238 335 aa13.81□□□□□ -0.2
TPM1-203ENST00000317516 ZNF260Q3ZCT1 412 aa13.81□□□□□ -0.2
TPM1-203ENST00000317516 AKIRIN2Q53H80 203 aa13.81□□□□□ -0.2
TPM1-203ENST00000317516 PPP1R27Q86WC6 154 aa13.81□□□□□ -0.2
TPM1-203ENST00000317516 OR5B12Q96R08 314 aa13.81□□□□□ -0.2
TPM1-203ENST00000317516 CLCC1Q96S66 551 aa13.81□□□□□ -0.2
TPM1-203ENST00000317516 B9D2Q9BPU9 175 aa13.81□□□□□ -0.2
TPM1-203ENST00000317516 GAB2Q9UQC2 676 aa13.81□□□□□ -0.2
TPM1-203ENST00000317516 KCNK7Q9Y2U2 307 aa13.81□□□□□ -0.2
TPM1-203ENST00000317516 A3GALT2U3KPV4 340 aa13.81□□□□□ -0.2
TPM1-203ENST00000317516 M0R1X1 148 aa13.8□□□□□ -0.2
TPM1-203ENST00000317516 RAB27BO00194 218 aa13.8□□□□□ -0.2
TPM1-203ENST00000317516 OR8U9P0C7N5 309 aa13.8□□□□□ -0.2
TPM1-203ENST00000317516 HIST1H1DP16402 221 aaKnown RBP13.8□□□□□ -0.2
TPM1-203ENST00000317516 GNB3P16520 340 aa13.8□□□□□ -0.2
TPM1-203ENST00000317516 ECI1P42126 302 aa13.8□□□□□ -0.2
TPM1-203ENST00000317516 NDPQ00604 133 aa13.8□□□□□ -0.2
TPM1-203ENST00000317516 TAGLNQ01995 201 aaKnown RBP13.8□□□□□ -0.2
TPM1-203ENST00000317516 PLA2G7Q13093 441 aa13.8□□□□□ -0.2
TPM1-203ENST00000317516 CBX3Q13185 183 aa13.8□□□□□ -0.2
TPM1-203ENST00000317516 ARFRP1Q13795 201 aa13.8□□□□□ -0.2
TPM1-203ENST00000317516 MOGAT2Q3SYC2 334 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms