RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 PITX3O75364 302 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 SPDEFO95238 335 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 PVALBP20472 110 aaPredicted RBP13.78□□□□□ -0.2
CLCF1-201ENST00000312438 DUTP33316 252 aaKnown RBP13.78□□□□□ -0.2
CLCF1-201ENST00000312438 P2RY1P47900 373 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 RAB14P61106 215 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 CXorf66Q5JRM2 361 aaPredicted RBP13.78□□□□□ -0.2
CLCF1-201ENST00000312438 GPR157Q5UAW9 335 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 HEPN1Q6WQI6 88 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.78□□□□□ -0.2
CLCF1-201ENST00000312438 ST8SIA2Q92186 375 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 LAMP3Q9UQV4 416 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 RCL1Q9Y2P8 373 aaKnown RBP13.78□□□□□ -0.2
CLCF1-201ENST00000312438 A0A1W2PPR1 153 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 LINC00473A8K010 186 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 C17orf98A8MV24 154 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 RAB29O14966 203 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 RAMP3O60896 148 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 MMP23AO75900 390 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 IGKV1-5P01602 117 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 BRWD1-AS2P59051 145 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 ZNF439Q8NDP4 499 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 DMBX1Q8NFW5 382 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 SCARB1Q8WTV0 552 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 LEAP2Q969E1 77 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 MMP24Q9Y5R2 645 aa13.78□□□□□ -0.2
CLCF1-201ENST00000312438 A6NNC1 897 aa13.77□□□□□ -0.21
CLCF1-201ENST00000312438 GPR37O15354 613 aa13.77□□□□□ -0.21
CLCF1-201ENST00000312438 SLC31A2O15432 143 aa13.77□□□□□ -0.21
CLCF1-201ENST00000312438 DAOP14920 347 aa13.77□□□□□ -0.21
CLCF1-201ENST00000312438 UTF1Q5T230 341 aa13.77□□□□□ -0.21
CLCF1-201ENST00000312438 PRAMEF5Q5TYX0 476 aa13.77□□□□□ -0.21
CLCF1-201ENST00000312438 ALKAL2Q6UX46 152 aa13.77□□□□□ -0.21
CLCF1-201ENST00000312438 Q6ZRM9 215 aa13.77□□□□□ -0.21
CLCF1-201ENST00000312438 RAB1CQ92928 201 aa13.77□□□□□ -0.21
CLCF1-201ENST00000312438 RAB39BQ96DA2 213 aa13.77□□□□□ -0.21
CLCF1-201ENST00000312438 RALYQ9UKM9 306 aaKnown RBP13.77□□□□□ -0.21
CLCF1-201ENST00000312438 PKDREJQ9NTG1 2253 aa13.77□□□□□ -0.21
CLCF1-201ENST00000312438 M0R1X1 148 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 GPR137BO60478 399 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 MMP9P14780 707 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 EPHA1P21709 976 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 POLR2GP62487 172 aaKnown RBP eCLIP13.76□□□□□ -0.21
CLCF1-201ENST00000312438 ZNF816Q0VGE8 651 aaPredicted RBP13.76□□□□□ -0.21
CLCF1-201ENST00000312438 OR2B11Q5JQS5 317 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 CLLU1Q5K131 121 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 NCR3LG1Q68D85 454 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 PHYHIPLQ96FC7 376 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 TIMD4Q96H15 378 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 BBC3Q96PG8 261 aaPredicted RBP13.76□□□□□ -0.21
CLCF1-201ENST00000312438 CYTL1Q9NRR1 136 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 ARFGEF3Q5TH69 2177 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 HIVEP3Q5T1R4 2406 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 TRBV23-1A0A0A0MS06 115 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 KRASP01116 189 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 CCL3L1P16619 93 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 RPL39P5Q59GN2 51 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 SLC25A48Q6ZT89 311 aaKnown RBP13.76□□□□□ -0.21
CLCF1-201ENST00000312438 STOML3Q8TAV4 291 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 C11orf1Q9H5F2 150 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 COA4Q9NYJ1 87 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 CACNG5Q9UF02 275 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 PRELID3BQ9Y3B1 194 aa13.76□□□□□ -0.21
CLCF1-201ENST00000312438 A0A1W2PPE3 182 aa13.75□□□□□ -0.21
CLCF1-201ENST00000312438 KIAA1324LA8MWY0 1029 aaPredicted RBP13.75□□□□□ -0.21
CLCF1-201ENST00000312438 WRBO00258 174 aa13.75□□□□□ -0.21
CLCF1-201ENST00000312438 GOSR1O95249 250 aa13.75□□□□□ -0.21
CLCF1-201ENST00000312438 PRB1P04280 392 aa13.75□□□□□ -0.21
CLCF1-201ENST00000312438 TMEM33P57088 247 aa13.75□□□□□ -0.21
CLCF1-201ENST00000312438 LINC00205P59089 165 aa13.75□□□□□ -0.21
CLCF1-201ENST00000312438 VAMP2P63027 116 aa13.75□□□□□ -0.21
CLCF1-201ENST00000312438 ZNF841Q6ZN19 808 aa13.75□□□□□ -0.21
CLCF1-201ENST00000312438 LYG1Q8N1E2 194 aa13.75□□□□□ -0.21
CLCF1-201ENST00000312438 MAGT1Q9H0U3 335 aa13.75□□□□□ -0.21
CLCF1-201ENST00000312438 UBTD1Q9HAC8 227 aa13.75□□□□□ -0.21
CLCF1-201ENST00000312438 MIOXQ9UGB7 285 aa13.75□□□□□ -0.21
CLCF1-201ENST00000312438 RBFOX2O43251 390 aaKnown RBP eCLIP13.74□□□□□ -0.21
CLCF1-201ENST00000312438 CHST1O43916 411 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 LY6HO94772 140 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 S1PR2O95136 353 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 HPRT1P00492 218 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 TPT1P13693 172 aaKnown RBP13.74□□□□□ -0.21
CLCF1-201ENST00000312438 G6PCP35575 357 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 GNG10P50151 68 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 ERVFRD-1P60508 538 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 EIF5AP63241 154 aaKnown RBP13.74□□□□□ -0.21
CLCF1-201ENST00000312438 IZUMO4Q1ZYL8 232 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 TMEM155Q4W5P6 130 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 AVPI1Q5T686 147 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 BAP18Q8IXM2 172 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 ODF3L1Q8IXM7 274 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 OR2C3Q8N628 320 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 S1PR3Q99500 378 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 CHODLQ9H9P2 273 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 SAA2-SAA4A0A096LPE2 208 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 RPS10-NUDT3A0A1W2PQS6 291 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 PPIHO43447 177 aaKnown RBP13.74□□□□□ -0.21
CLCF1-201ENST00000312438 SSSCA1O60232 199 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 FCGR3BO75015 233 aa13.74□□□□□ -0.21
CLCF1-201ENST00000312438 SAA2P0DJI9 122 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms