RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 WNT5BQ9H1J7 359 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 DDTP30046 118 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 TMEM171Q8WVE6 324 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 RBM11P57052 281 aaKnown RBP13.5□□□□□ -0.25
HCFC1-201ENST00000310441 FAM106AQ4KMX7 169 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 MEIG1Q5JSS6 88 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 FBXW9Q5XUX1 488 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 NUDT11Q96G61 164 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 TUBD1Q9UJT1 453 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 WIPI2Q9Y4P8 454 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 P2RY6Q15077 328 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 MMD2Q8IY49 270 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 OR52M1Q8NGK5 317 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 RNF133Q8WVZ7 376 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 IGHV5-51A0A0C4DH38 117 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 FAM90A10PA6NDY2 464 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 FAM90A18PA6NE21 464 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 FAM90A16PA6NEW6 464 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 FAM90A20PA6NIJ5 464 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 FAM90A8PA6NJQ4 464 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 FAM90A7PA6NKC0 464 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 FAM90A22PA8MWA6 464 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 FAM90A12PA8MX19 464 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 FAM90A5PA8MXJ8 464 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 FAM90A23PA8MXZ1 464 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 C1QTNF9BB2RNN3 333 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 C16orf97H3BN30 126 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 FAM90A15PP0C7V4 464 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 FAM90A13PP0C7W8 464 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 FAM90A14PP0C7W9 464 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 FAM90A24PP0C7X0 464 aa13.5□□□□□ -0.25
HCFC1-201ENST00000310441 IGHV1OR21-1A0A087WYE8 117 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 TMEM177Q53S58 311 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 V9GYH0 126 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 MED19A0JLT2 244 aaPredicted RBP13.49□□□□□ -0.25
HCFC1-201ENST00000310441 ZNF98A6NK75 572 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 ATG4DQ86TL0 474 aaPredicted RBP13.49□□□□□ -0.25
HCFC1-201ENST00000310441 UBR3Q6ZT12 1888 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 TRBV23-1A0A0A0MS06 115 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 NUBP1P53384 320 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 TRIP6Q15654 476 aaKnown RBP13.49□□□□□ -0.25
HCFC1-201ENST00000310441 RARRES2Q99969 163 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 LHX9Q9NQ69 397 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 EDIL3O43854 480 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 ATP6V0CP27449 155 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 DMRTC1Q5HYR2 192 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 RNF224P0DH78 156 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 ZNF430Q9H8G1 570 aaPredicted RBP13.49□□□□□ -0.25
HCFC1-201ENST00000310441 OR5AC2Q9NZP5 309 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 A0A1B0GW15 77 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 MESTQ5EB52 335 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 TAF1LQ8IZX4 1826 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 NHSL1Q5SYE7 1610 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 OTPQ5XKR4 325 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 MAFAQ8NHW3 353 aaPredicted RBP13.49□□□□□ -0.25
HCFC1-201ENST00000310441 QTRT1Q9BXR0 403 aaKnown RBP13.49□□□□□ -0.25
HCFC1-201ENST00000310441 TMEM222Q9H0R3 208 aa13.49□□□□□ -0.25
HCFC1-201ENST00000310441 MS4A7Q9GZW8 240 aaPredicted RBP13.48□□□□□ -0.25
HCFC1-201ENST00000310441 SERGEFQ9UGK8 458 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 ANOS1P23352 680 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 SPINK14Q6IE38 97 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 GPR82Q96P67 336 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 LCTP09848 1927 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 WNT5AP41221 380 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 AICDAQ9GZX7 198 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 MRPL18Q9H0U6 180 aaKnown RBP13.48□□□□□ -0.25
HCFC1-201ENST00000310441 CISD1Q9NZ45 108 aaKnown RBP13.48□□□□□ -0.25
HCFC1-201ENST00000310441 TCRBV16S1A1N1A0A5B0 115 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 C7orf66A4D0T2 115 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 SLC25A20O43772 301 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 GGTLC2Q14390 218 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 OR51M1Q9H341 326 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 J3KRW8 73 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 CCL2P13500 99 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 PDCD1Q15116 288 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 GUSBP11Q6P575 273 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 CCL28Q9NRJ3 127 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 PLXND1Q9Y4D7 1925 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 CXCL3P19876 107 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 HIST1H1AQ02539 215 aaPredicted RBP13.48□□□□□ -0.25
HCFC1-201ENST00000310441 RASL10BQ96S79 203 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 ANKRD34AQ69YU3 496 aa13.48□□□□□ -0.25
HCFC1-201ENST00000310441 A0A1W2PR80 420 aa13.47□□□□□ -0.25
HCFC1-201ENST00000310441 LYZL2Q7Z4W2 148 aa13.47□□□□□ -0.25
HCFC1-201ENST00000310441 DDA1Q9BW61 102 aa13.47□□□□□ -0.25
HCFC1-201ENST00000310441 C9orf172C9J069 976 aa13.47□□□□□ -0.25
HCFC1-201ENST00000310441 PPM1DO15297 605 aa13.47□□□□□ -0.25
HCFC1-201ENST00000310441 MYOGP15173 224 aa13.47□□□□□ -0.25
HCFC1-201ENST00000310441 TNFRSF12AQ9NP84 129 aa13.47□□□□□ -0.25
HCFC1-201ENST00000310441 C2CD4DB7Z1M9 353 aa13.47□□□□□ -0.25
HCFC1-201ENST00000310441 SHISA8B8ZZ34 492 aa13.47□□□□□ -0.25
HCFC1-201ENST00000310441 HES3Q5TGS1 186 aa13.47□□□□□ -0.25
HCFC1-201ENST00000310441 C1orf210Q8IVY1 113 aa13.47□□□□□ -0.25
HCFC1-201ENST00000310441 SOCS1O15524 211 aa13.47□□□□□ -0.25
HCFC1-201ENST00000310441 PGPEP1Q9NXJ5 209 aa13.47□□□□□ -0.25
HCFC1-201ENST00000310441 IGKV3-7A0A075B6H7 116 aa13.47□□□□□ -0.25
HCFC1-201ENST00000310441 LINC00869P0C866 280 aa13.47□□□□□ -0.25
HCFC1-201ENST00000310441 FCARP24071 287 aa13.47□□□□□ -0.25
HCFC1-201ENST00000310441 SOX8P57073 446 aa13.47□□□□□ -0.25
HCFC1-201ENST00000310441 OR4C13Q8NGP0 309 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms