RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 PAX5Q02548 391 aa11.41□□□□□ -0.58
SCAF4-201ENST00000286835 HERPUD1Q15011 391 aa11.41□□□□□ -0.58
SCAF4-201ENST00000286835 DLL3Q9NYJ7 618 aa11.41□□□□□ -0.58
SCAF4-201ENST00000286835 ADAMTS9Q9P2N4 1935 aa11.41□□□□□ -0.58
SCAF4-201ENST00000286835 GRIFINA4D1Z8 144 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 F6UZH7 168 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 FGF5P12034 268 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 THBS3P49746 956 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 CEACAM21Q3KPI0 293 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 NMSQ5H8A3 153 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 TRIB1Q96RU8 372 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 AMBPP02760 352 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 CDC34P49427 236 aaPredicted RBP11.4□□□□□ -0.58
SCAF4-201ENST00000286835 ARL16Q0P5N6 197 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 DCAF10Q5QP82 559 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 ATP1A1-AS1Q5TC04 95 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 FAM90A2PQ658T7 463 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 MRGPRDQ8TDS7 321 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 RAB24Q969Q5 203 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 FAM173AQ9BQD7 235 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 PRDM13Q9H4Q3 707 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 FZR1Q9UM11 496 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 TMEM131Q92545 1883 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 TRAV38-1A0A0B4J264 116 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 HIST1H3AP68431 136 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 SERF2P84101 59 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 PRAMEF5Q5TYX0 476 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 PRAMEF6Q5VXH4 476 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 CRIP3Q6Q6R5 217 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 ZNF525Q8N782 197 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 OR51G1Q8NGK1 321 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 SIGLEC12Q96PQ1 595 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 WDR54Q9H977 334 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 PAM16Q9Y3D7 125 aa11.4□□□□□ -0.58
SCAF4-201ENST00000286835 PRR14LQ5THK1 2151 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 PGPEP1LA6NFU8 196 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 SH2D1BO14796 132 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 NDUFB4O95168 129 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 CD33P20138 364 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 C20orf204Q6ZNR8 217 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 SCRT1Q9BWW7 348 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 ENY2Q9NPA8 101 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 PARD6AQ9NPB6 346 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 ABCA4P78363 2273 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 COX6A1P12074 109 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 ACOT6Q3I5F7 207 aaPredicted RBP11.39□□□□□ -0.59
SCAF4-201ENST00000286835 ZNF766Q5HY98 468 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 DPPA3Q6W0C5 159 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 NUFIP2Q7Z417 695 aaKnown RBP11.39□□□□□ -0.59
SCAF4-201ENST00000286835 DTD1Q8TEA8 209 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 GALMQ96C23 342 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 RTL8AQ9BWD3 113 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 WDR61Q9GZS3 305 aaKnown RBP11.39□□□□□ -0.59
SCAF4-201ENST00000286835 SRD5A3Q9H8P0 318 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 DUSP13Q9UII6 198 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 TRANK1O15050 2925 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 IGLV3-32A0A0A0MS00 114 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 DUXBA0A1W2PPF3 345 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 HRASP01112 189 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 KRTDAPP60985 99 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 OR8G5Q8NG78 346 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 SGMS2Q8NHU3 365 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 ZDHHC16Q969W1 377 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 ZNF71Q9NQZ8 489 aaPredicted RBP11.39□□□□□ -0.59
SCAF4-201ENST00000286835 PLSCR2Q9NRY7 297 aa11.39□□□□□ -0.59
SCAF4-201ENST00000286835 KIAA1324LA8MWY0 1029 aaPredicted RBP11.38□□□□□ -0.59
SCAF4-201ENST00000286835 C1QTNF9BB2RNN3 333 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 B4E171 279 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 ZG16O60844 167 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 TSPAN7P41732 249 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 MEOX1P50221 254 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 TAS2R60P59551 318 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 OR4A16Q8NH70 328 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 HES7Q9BYE0 225 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.38□□□□□ -0.59
SCAF4-201ENST00000286835 DECR2Q9NUI1 292 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 PSG11Q9UQ72 335 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 CADP27708 2225 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 ABCA1O95477 2261 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 EYSQ5T1H1 3165 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 INTS1Q8N201 2190 aaKnown RBP11.38□□□□□ -0.59
SCAF4-201ENST00000286835 VSTM5A8MXK1 200 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 MKRN2OSH3BPM6 223 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 ACTL6BO94805 426 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 CNN1P51911 297 aaKnown RBP11.38□□□□□ -0.59
SCAF4-201ENST00000286835 RPL23P62829 140 aaKnown RBP11.38□□□□□ -0.59
SCAF4-201ENST00000286835 SSMEM1Q8WWF3 244 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 TBX15Q96SF7 602 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 TMEM147Q9BVK8 224 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 PLEKHA3Q9HB20 300 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 TP53TG5Q9Y2B4 290 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 TRGV5A0A0B4J1U4 118 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 IGKV1-6A0A0C4DH72 117 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 CTXND1A0A1B0GTU2 59 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 NKX2-8O15522 239 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 KBTBD11O94819 623 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 DBX2Q6ZNG2 339 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 OR5A2Q8NGI9 324 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 LOXL4Q96JB6 756 aa11.38□□□□□ -0.59
SCAF4-201ENST00000286835 CRIM1Q9NZV1 1036 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms