RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 GAL3ST2Q9H3Q3 398 aa18.19■□□□□ 0.5
CCDC7-201ENST00000277657 C11orf1Q9H5F2 150 aa18.19■□□□□ 0.5
CCDC7-201ENST00000277657 PLEKHA2Q9HB19 425 aa18.19■□□□□ 0.5
CCDC7-201ENST00000277657 RPUSD1Q9UJJ7 312 aaKnown RBP18.19■□□□□ 0.5
CCDC7-201ENST00000277657 LINC00473A8K010 186 aa18.18■□□□□ 0.5
CCDC7-201ENST00000277657 SLC31A2O15432 143 aa18.18■□□□□ 0.5
CCDC7-201ENST00000277657 RAMP3O60896 148 aa18.18■□□□□ 0.5
CCDC7-201ENST00000277657 MMP23AO75900 390 aa18.18■□□□□ 0.5
CCDC7-201ENST00000277657 IGHV2-70P01814 119 aa18.18■□□□□ 0.5
CCDC7-201ENST00000277657 RPL12P30050 165 aaKnown RBP18.18■□□□□ 0.5
CCDC7-201ENST00000277657 LPAR6P43657 344 aa18.18■□□□□ 0.5
CCDC7-201ENST00000277657 MRPS11P82912 194 aaKnown RBP18.18■□□□□ 0.5
CCDC7-201ENST00000277657 ID3Q02535 119 aa18.18■□□□□ 0.5
CCDC7-201ENST00000277657 CT45A1Q5HYN5 189 aa18.18■□□□□ 0.5
CCDC7-201ENST00000277657 TMEM200BQ69YZ2 307 aa18.18■□□□□ 0.5
CCDC7-201ENST00000277657 CT45A3Q8NHU0 189 aa18.18■□□□□ 0.5
CCDC7-201ENST00000277657 TCTEX1D2Q8WW35 142 aa18.18■□□□□ 0.5
CCDC7-201ENST00000277657 RPS10-NUDT3A0A1W2PQS6 291 aa18.18■□□□□ 0.5
CCDC7-201ENST00000277657 C17orf98A8MV24 154 aa18.18■□□□□ 0.5
CCDC7-201ENST00000277657 F5H0A9 414 aaPredicted RBP18.18■□□□□ 0.5
CCDC7-201ENST00000277657 CXorf66Q5JRM2 361 aaPredicted RBP18.18■□□□□ 0.5
CCDC7-201ENST00000277657 ZNF471Q9BX82 626 aaPredicted RBP18.18■□□□□ 0.5
CCDC7-201ENST00000277657 CYTL1Q9NRR1 136 aa18.18■□□□□ 0.5
CCDC7-201ENST00000277657 DCHS2Q6V1P9 2916 aa18.17■□□□□ 0.5
CCDC7-201ENST00000277657 IGHV3-7P01780 117 aa18.17■□□□□ 0.5
CCDC7-201ENST00000277657 DUTP33316 252 aaKnown RBP18.17■□□□□ 0.5
CCDC7-201ENST00000277657 CLLU1Q5K131 121 aa18.17■□□□□ 0.5
CCDC7-201ENST00000277657 PRAMEF5Q5TYX0 476 aa18.17■□□□□ 0.5
CCDC7-201ENST00000277657 ALKAL2Q6UX46 152 aa18.17■□□□□ 0.5
CCDC7-201ENST00000277657 Q6ZRM9 215 aa18.17■□□□□ 0.5
CCDC7-201ENST00000277657 SPAG16Q8N0X2 631 aa18.17■□□□□ 0.5
CCDC7-201ENST00000277657 SCARB1Q8WTV0 552 aa18.17■□□□□ 0.5
CCDC7-201ENST00000277657 NEU4Q8WWR8 484 aaPredicted RBP18.17■□□□□ 0.5
CCDC7-201ENST00000277657 LEAP2Q969E1 77 aa18.17■□□□□ 0.5
CCDC7-201ENST00000277657 ZNF714Q96N38 554 aa18.17■□□□□ 0.5
CCDC7-201ENST00000277657 BBC3Q96PG8 261 aaPredicted RBP18.17■□□□□ 0.5
CCDC7-201ENST00000277657 GSX2Q9BZM3 304 aa18.17■□□□□ 0.5
CCDC7-201ENST00000277657 B8ZZF3 427 aa18.16■□□□□ 0.5
CCDC7-201ENST00000277657 NFYBP25208 207 aa18.16■□□□□ 0.5
CCDC7-201ENST00000277657 P2RY1P47900 373 aa18.16■□□□□ 0.5
CCDC7-201ENST00000277657 AKR1C2P52895 323 aa18.16■□□□□ 0.5
CCDC7-201ENST00000277657 HEPN1Q6WQI6 88 aa18.16■□□□□ 0.5
CCDC7-201ENST00000277657 STOML3Q8TAV4 291 aa18.16■□□□□ 0.5
CCDC7-201ENST00000277657 POLR2GP62487 172 aaKnown RBP eCLIP18.16■□□□□ 0.5
CCDC7-201ENST00000277657 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.16■□□□□ 0.5
CCDC7-201ENST00000277657 RNASE11Q8TAA1 199 aaKnown RBP18.16■□□□□ 0.5
CCDC7-201ENST00000277657 H1FXQ92522 213 aaKnown RBP18.16■□□□□ 0.5
CCDC7-201ENST00000277657 KIAA1324LA8MWY0 1029 aaPredicted RBP18.15■□□□□ 0.5
CCDC7-201ENST00000277657 P0C879 139 aa18.15■□□□□ 0.5
CCDC7-201ENST00000277657 EPHA1P21709 976 aa18.15■□□□□ 0.5
CCDC7-201ENST00000277657 LINC00205P59089 165 aa18.15■□□□□ 0.5
CCDC7-201ENST00000277657 RPL39P5Q59GN2 51 aa18.15■□□□□ 0.5
CCDC7-201ENST00000277657 OR2B11Q5JQS5 317 aa18.15■□□□□ 0.5
CCDC7-201ENST00000277657 GPR157Q5UAW9 335 aa18.15■□□□□ 0.5
CCDC7-201ENST00000277657 NCR3LG1Q68D85 454 aa18.15■□□□□ 0.5
CCDC7-201ENST00000277657 CD300LFQ8TDQ1 290 aa18.15■□□□□ 0.5
CCDC7-201ENST00000277657 MMP24Q9Y5R2 645 aa18.15■□□□□ 0.5
CCDC7-201ENST00000277657 YLPM1P49750 1951 aaKnown RBP18.14■□□□□ 0.49
CCDC7-201ENST00000277657 TAAR5O14804 337 aa18.14■□□□□ 0.49
CCDC7-201ENST00000277657 CCL3L1P16619 93 aa18.14■□□□□ 0.49
CCDC7-201ENST00000277657 IZUMO4Q1ZYL8 232 aa18.14■□□□□ 0.49
CCDC7-201ENST00000277657 ODF3L1Q8IXM7 274 aa18.14■□□□□ 0.49
CCDC7-201ENST00000277657 PHYHIPLQ96FC7 376 aa18.14■□□□□ 0.49
CCDC7-201ENST00000277657 CACNG5Q9UF02 275 aa18.14■□□□□ 0.49
CCDC7-201ENST00000277657 M0R1X1 148 aa18.14■□□□□ 0.49
CCDC7-201ENST00000277657 RAB29O14966 203 aa18.14■□□□□ 0.49
CCDC7-201ENST00000277657 S1PR2O95136 353 aa18.14■□□□□ 0.49
CCDC7-201ENST00000277657 MMP9P14780 707 aa18.14■□□□□ 0.49
CCDC7-201ENST00000277657 ZNF816Q0VGE8 651 aaPredicted RBP18.14■□□□□ 0.49
CCDC7-201ENST00000277657 ZNF841Q6ZN19 808 aa18.14■□□□□ 0.49
CCDC7-201ENST00000277657 C1orf229Q6ZS94 237 aaPredicted RBP18.14■□□□□ 0.49
CCDC7-201ENST00000277657 SLC25A48Q6ZT89 311 aaKnown RBP18.14■□□□□ 0.49
CCDC7-201ENST00000277657 COA4Q9NYJ1 87 aa18.14■□□□□ 0.49
CCDC7-201ENST00000277657 LAMP3Q9UQV4 416 aa18.14■□□□□ 0.49
CCDC7-201ENST00000277657 ZFYVE26Q68DK2 2539 aa18.13■□□□□ 0.49
CCDC7-201ENST00000277657 TRBV23-1A0A0A0MS06 115 aa18.13■□□□□ 0.49
CCDC7-201ENST00000277657 A0A1W2PPE3 182 aa18.13■□□□□ 0.49
CCDC7-201ENST00000277657 A6NNC1 897 aa18.13■□□□□ 0.49
CCDC7-201ENST00000277657 GPR137BO60478 399 aa18.13■□□□□ 0.49
CCDC7-201ENST00000277657 LY6HO94772 140 aa18.13■□□□□ 0.49
CCDC7-201ENST00000277657 ATG12O94817 140 aa18.13■□□□□ 0.49
CCDC7-201ENST00000277657 DAOP14920 347 aa18.13■□□□□ 0.49
CCDC7-201ENST00000277657 DLX6P56179 175 aa18.13■□□□□ 0.49
CCDC7-201ENST00000277657 RAB14P61106 215 aa18.13■□□□□ 0.49
CCDC7-201ENST00000277657 TMEM155Q4W5P6 130 aa18.13■□□□□ 0.49
CCDC7-201ENST00000277657 ZNF251Q9BRH9 671 aa18.13■□□□□ 0.49
CCDC7-201ENST00000277657 MAGT1Q9H0U3 335 aa18.13■□□□□ 0.49
CCDC7-201ENST00000277657 ZC4H2Q9NQZ6 224 aa18.13■□□□□ 0.49
CCDC7-201ENST00000277657 SAA2-SAA4A0A096LPE2 208 aa18.12■□□□□ 0.49
CCDC7-201ENST00000277657 PRB1P04280 392 aa18.12■□□□□ 0.49
CCDC7-201ENST00000277657 SAA2P0DJI9 122 aaPredicted RBP18.12■□□□□ 0.49
CCDC7-201ENST00000277657 PVALBP20472 110 aaPredicted RBP18.12■□□□□ 0.49
CCDC7-201ENST00000277657 LINC00862A6NCI5 91 aa18.12■□□□□ 0.49
CCDC7-201ENST00000277657 RBFOX2O43251 390 aaKnown RBP eCLIP18.12■□□□□ 0.49
CCDC7-201ENST00000277657 SSSCA1O60232 199 aa18.12■□□□□ 0.49
CCDC7-201ENST00000277657 KRASP01116 189 aa18.12■□□□□ 0.49
CCDC7-201ENST00000277657 TPT1P13693 172 aaKnown RBP18.12■□□□□ 0.49
CCDC7-201ENST00000277657 TMEM33P57088 247 aa18.12■□□□□ 0.49
CCDC7-201ENST00000277657 ERVFRD-1P60508 538 aa18.12■□□□□ 0.49
CCDC7-201ENST00000277657 DDB2Q92466 427 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms