RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 RBFOX2O43251 390 aaKnown RBP eCLIP17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 STAG3L2P0CL84 134 aa17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 ZP3P21754 424 aa17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 NPPCP23582 126 aa17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 RPL8P62917 257 aaKnown RBP17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 MIC13Q5XKP0 118 aa17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 SRSF12Q8WXF0 261 aaKnown RBP17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 M0R143 59 aa17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 PEX11BO96011 259 aa17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 PLPPR5Q32ZL2 321 aa17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 SOX21Q9Y651 276 aaPredicted RBP17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 FAM27E3Q08E93 113 aa17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 ZNF645Q8N7E2 425 aa17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 C7orf69Q9H7B7 122 aa17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 A0A1W2PQD3 144 aa17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 COX6CP09669 75 aa17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 LINC00470Q9BZP3 86 aa17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 CENPVL1A0A0U1RR11 272 aa17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 IGKV1D-16P01601 117 aa17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 SRD5A1P18405 259 aa17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 HOXC8P31273 242 aa17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 SNAI3Q3KNW1 292 aa17.54■□□□□ 0.4
CACNA1B-201ENST00000277549 DDX60LQ5H9U9 1706 aaKnown RBP17.53■□□□□ 0.4
CACNA1B-201ENST00000277549 CIRBPQ14011 172 aaKnown RBP17.53■□□□□ 0.4
CACNA1B-201ENST00000277549 FDCSPQ8NFU4 85 aa17.53■□□□□ 0.4
CACNA1B-201ENST00000277549 TMEM74BQ9NUR3 256 aa17.53■□□□□ 0.4
CACNA1B-201ENST00000277549 M0R381 172 aa17.53■□□□□ 0.4
CACNA1B-201ENST00000277549 MPV17P39210 176 aa17.53■□□□□ 0.4
CACNA1B-201ENST00000277549 TMEM177Q53S58 311 aa17.53■□□□□ 0.4
CACNA1B-201ENST00000277549 PQLC2Q6ZP29 291 aa17.53■□□□□ 0.4
CACNA1B-201ENST00000277549 STPG3Q8N7X2 389 aa17.53■□□□□ 0.4
CACNA1B-201ENST00000277549 NRAPQ86VF7 1730 aa17.53■□□□□ 0.4
CACNA1B-201ENST00000277549 DEGS2Q6QHC5 323 aa17.52■□□□□ 0.4
CACNA1B-201ENST00000277549 NDUFB4O95168 129 aa17.52■□□□□ 0.4
CACNA1B-201ENST00000277549 SSBP3Q9BWW4 388 aaPredicted RBP17.52■□□□□ 0.4
CACNA1B-201ENST00000277549 AHRRA9YTQ3 701 aa17.52■□□□□ 0.4
CACNA1B-201ENST00000277549 KLK13Q9UKR3 277 aa17.52■□□□□ 0.4
CACNA1B-201ENST00000277549 LMX1BO60663 402 aa17.52■□□□□ 0.4
CACNA1B-201ENST00000277549 OR4X2Q8NGF9 303 aa17.52■□□□□ 0.4
CACNA1B-201ENST00000277549 PLCH1Q4KWH8 1693 aa17.52■□□□□ 0.4
CACNA1B-201ENST00000277549 CLEC19AQ6UXS0 136 aa17.52■□□□□ 0.39
CACNA1B-201ENST00000277549 RAB33BQ9H082 229 aa17.52■□□□□ 0.39
CACNA1B-201ENST00000277549 HINT1P49773 126 aaPredicted RBP17.52■□□□□ 0.39
CACNA1B-201ENST00000277549 RIPPLY3P57055 190 aa17.52■□□□□ 0.39
CACNA1B-201ENST00000277549 VGLL1Q99990 258 aa17.52■□□□□ 0.39
CACNA1B-201ENST00000277549 NEU3Q9UQ49 428 aa17.52■□□□□ 0.39
CACNA1B-201ENST00000277549 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 CBLN2Q8IUK8 224 aa17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 SRXN1Q9BYN0 137 aa17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 MRPL30Q8TCC3 161 aaKnown RBP17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 DEFB104AQ8WTQ1 72 aa17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 ALG14Q96F25 216 aa17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 WDR54Q9H977 334 aa17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 F12P00748 615 aaPredicted RBP17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 FAM3BP58499 235 aaPredicted RBP17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 PAPPA2Q9BXP8 1791 aa17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 A0A1W2PQF6 199 aa17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 IGKV1D-33P01593 117 aa17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 IGKV1-33P01594 117 aa17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 IBA57Q5T440 356 aaKnown RBP17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 UQCC3Q6UW78 93 aa17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 LSM10Q969L4 123 aaKnown RBP17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 TNFRSF18Q9Y5U5 241 aa17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 ASCC3Q8N3C0 2202 aaKnown RBP17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 VDAC2P45880 294 aaPredicted RBP17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 CEACAM21Q3KPI0 293 aa17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 XAF1Q6GPH4 301 aa17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 FOXB2Q5VYV0 432 aa17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 ZNF383Q8NA42 475 aa17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 TMEM174Q8WUU8 243 aa17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 ZNF501Q96CX3 271 aaPredicted RBP17.51■□□□□ 0.39
CACNA1B-201ENST00000277549 H3BQ15 152 aa17.5■□□□□ 0.39
CACNA1B-201ENST00000277549 S1PR2O95136 353 aa17.5■□□□□ 0.39
CACNA1B-201ENST00000277549 ABHD1Q96SE0 405 aa17.5■□□□□ 0.39
CACNA1B-201ENST00000277549 ANGPTL4Q9BY76 406 aa17.5■□□□□ 0.39
CACNA1B-201ENST00000277549 OR4C45A6NMZ5 311 aa17.5■□□□□ 0.39
CACNA1B-201ENST00000277549 BEND2Q8NDZ0 799 aa17.5■□□□□ 0.39
CACNA1B-201ENST00000277549 NPFFR1Q9GZQ6 430 aa17.5■□□□□ 0.39
CACNA1B-201ENST00000277549 PSG9Q00887 426 aa17.5■□□□□ 0.39
CACNA1B-201ENST00000277549 DSPPQ9NZW4 1301 aa17.5■□□□□ 0.39
CACNA1B-201ENST00000277549 TMEM218A2RU14 115 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 TSPOP30536 169 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 STHQ8IWL8 128 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 MAP1LC3AQ9H492 121 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 MGST3O14880 152 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 CDX1P47902 265 aaPredicted RBP17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 WFIKKN1Q96NZ8 548 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 TMEM238LA0A1B0GVL6 79 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 A6NJY4 79 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 NUTF2P61970 127 aaKnown RBP17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 TMEM170BQ5T4T1 132 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 FOXS1O43638 330 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 MESP2Q0VG99 397 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 ATOH7Q8N100 152 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 A0A0U1RQV5 110 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 TCF21O43680 179 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 IL4P05112 153 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 VSIG8P0DPA2 414 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 LHX2P50458 406 aa17.49■□□□□ 0.39
CACNA1B-201ENST00000277549 ZNF324BQ6AW86 544 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms