RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 CLN5O75503 358 aa10.87□□□□□ -0.67
C9orf3-201ENST00000277198 IFNA1P01562 189 aa10.87□□□□□ -0.67
C9orf3-201ENST00000277198 SELEP16581 610 aa10.87□□□□□ -0.67
C9orf3-201ENST00000277198 CDX1P47902 265 aaPredicted RBP10.87□□□□□ -0.67
C9orf3-201ENST00000277198 TDGF1P3P51864 188 aa10.87□□□□□ -0.67
C9orf3-201ENST00000277198 RND2P52198 227 aa10.87□□□□□ -0.67
C9orf3-201ENST00000277198 TMEM267Q0VDI3 215 aaPredicted RBP10.87□□□□□ -0.67
C9orf3-201ENST00000277198 ZNF787Q6DD87 383 aa10.87□□□□□ -0.67
C9orf3-201ENST00000277198 FIP1L1Q6UN15 594 aaKnown RBP10.87□□□□□ -0.67
C9orf3-201ENST00000277198 FAM180AQ6UWF9 173 aa10.87□□□□□ -0.67
C9orf3-201ENST00000277198 CENPVQ7Z7K6 275 aaPredicted RBP10.87□□□□□ -0.67
C9orf3-201ENST00000277198 MRGPRGQ86SM5 289 aa10.87□□□□□ -0.67
C9orf3-201ENST00000277198 SCCPDHQ8NBX0 429 aa10.87□□□□□ -0.67
C9orf3-201ENST00000277198 WDR61Q9GZS3 305 aaKnown RBP10.87□□□□□ -0.67
C9orf3-201ENST00000277198 TOLLIPQ9H0E2 274 aa10.87□□□□□ -0.67
C9orf3-201ENST00000277198 GSN-AS1Q9NRJ2 163 aa10.87□□□□□ -0.67
C9orf3-201ENST00000277198 RBM7Q9Y580 266 aaKnown RBP10.87□□□□□ -0.67
C9orf3-201ENST00000277198 CYSRT1A8MQ03 144 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 H3BP45 60 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 NXPH3O95157 252 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 RAC2P15153 192 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 CD46P15529 392 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 TGFBR3Q03167 851 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 ATP6V1FQ16864 119 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 TMEM41BQ5BJD5 291 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 RNFT1Q5M7Z0 435 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 FAM90A2PQ658T7 463 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 TCTEX1D1Q8N7M0 179 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 ZNF610Q8N9Z0 462 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 Q8WTZ3 238 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 GNG13Q9P2W3 67 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 VAX2Q9UIW0 290 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.86□□□□□ -0.67
C9orf3-201ENST00000277198 LILRB2Q8N423 598 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 FGFRL1Q8N441 504 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 DRAM1Q8N682 238 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 WDYHV1Q96HA8 205 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 CTDSP1Q9GZU7 261 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 KCNIP1Q9NZI2 227 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 OR14J1Q9UGF5 321 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 PPP1R3CQ9UQK1 317 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 ICE1Q9Y2F5 2266 aa10.86□□□□□ -0.67
C9orf3-201ENST00000277198 A0A1W2PR80 420 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 ZNF727A8MUV8 499 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 IQCF6A8MYZ5 107 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 SMPD2O60906 423 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 CYB5R3P00387 301 aaPredicted RBP10.85□□□□□ -0.67
C9orf3-201ENST00000277198 METTL15P1P0C7V9 234 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 CEACAM6P40199 344 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 CEBPGP53567 150 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 PPP1CBP62140 327 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 RAB11AP62491 216 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 TMEM14EPQ6UXP3 125 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 WDR86Q86TI4 376 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 ZNF645Q8N7E2 425 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 RCC1LQ96I51 464 aaKnown RBP10.85□□□□□ -0.67
C9orf3-201ENST00000277198 GMPPAQ96IJ6 420 aaPredicted RBP10.85□□□□□ -0.67
C9orf3-201ENST00000277198 RSG1Q9BU20 258 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 CLDN34H7C241 214 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 SIRPB1O00241 398 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 WDR1O75083 606 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 NXPH2O95156 264 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 FBP1P09467 338 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 TUBG1P23258 451 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 ERVFRD-1P60508 538 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 ARL16Q0P5N6 197 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 HIST2H2BCQ6DN03 193 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 P4HA3Q7Z4N8 544 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 HAPLN4Q86UW8 402 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 ST6GALNAC3Q8NDV1 305 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 CA5BP1Q8WTZ4 195 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 AGMATQ9BSE5 352 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 CDH20Q9HBT6 801 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 HES4Q9HCC6 221 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 TUBG2Q9NRH3 451 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 HSPB7Q9UBY9 170 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 KCNS2Q9ULS6 477 aa10.85□□□□□ -0.67
C9orf3-201ENST00000277198 DOPEY1Q5JWR5 2465 aa10.84□□□□□ -0.67
C9orf3-201ENST00000277198 ELOA3CA0A087WX78 387 aaPredicted RBP10.84□□□□□ -0.67
C9orf3-201ENST00000277198 TRGV5A0A0B4J1U4 118 aa10.84□□□□□ -0.67
C9orf3-201ENST00000277198 TMEM30CPA0ZSE6 113 aa10.84□□□□□ -0.67
C9orf3-201ENST00000277198 SEC14L6B5MCN3 397 aa10.84□□□□□ -0.67
C9orf3-201ENST00000277198 AGFG2O95081 481 aa10.84□□□□□ -0.67
C9orf3-201ENST00000277198 MBP02144 154 aa10.84□□□□□ -0.67
C9orf3-201ENST00000277198 IAPPP10997 89 aa10.84□□□□□ -0.67
C9orf3-201ENST00000277198 TNFRSF9Q07011 255 aa10.84□□□□□ -0.67
C9orf3-201ENST00000277198 ZNF726P1Q15940 193 aa10.84□□□□□ -0.67
C9orf3-201ENST00000277198 ZNF674Q2M3X9 581 aa10.84□□□□□ -0.67
C9orf3-201ENST00000277198 SLC35E4Q6ICL7 350 aa10.84□□□□□ -0.67
C9orf3-201ENST00000277198 C1orf87Q8N0U7 546 aa10.84□□□□□ -0.67
C9orf3-201ENST00000277198 TAF15Q92804 592 aaKnown RBP eCLIP10.84□□□□□ -0.67
C9orf3-201ENST00000277198 GALMQ96C23 342 aa10.84□□□□□ -0.67
C9orf3-201ENST00000277198 OR4C12Q96R67 309 aa10.84□□□□□ -0.67
C9orf3-201ENST00000277198 C12orf49Q9H741 205 aa10.84□□□□□ -0.67
C9orf3-201ENST00000277198 ZNF665Q9H7R5 613 aa10.84□□□□□ -0.67
C9orf3-201ENST00000277198 SDF2L1Q9HCN8 221 aa10.84□□□□□ -0.67
C9orf3-201ENST00000277198 DOK5Q9P104 306 aa10.84□□□□□ -0.67
C9orf3-201ENST00000277198 LAMP3Q9UQV4 416 aa10.84□□□□□ -0.67
C9orf3-201ENST00000277198 DIDO1Q9BTC0 2240 aaKnown RBP10.84□□□□□ -0.67
C9orf3-201ENST00000277198 TRBV24-1A0A075B6N3 115 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms