RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 ALKAL2Q6UX46 152 aa9.97□□□□□ -0.81
SDE2-201ENST00000272091 EDARADDQ8WWZ3 215 aa9.97□□□□□ -0.81
SDE2-201ENST00000272091 ST8SIA2Q92186 375 aa9.97□□□□□ -0.81
SDE2-201ENST00000272091 ZNF251Q9BRH9 671 aa9.97□□□□□ -0.81
SDE2-201ENST00000272091 UBQLN2Q9UHD9 624 aa9.97□□□□□ -0.81
SDE2-201ENST00000272091 NXPH3O95157 252 aa9.96□□□□□ -0.81
SDE2-201ENST00000272091 FSTL3O95633 263 aa9.96□□□□□ -0.81
SDE2-201ENST00000272091 IFNA7P01567 189 aa9.96□□□□□ -0.81
SDE2-201ENST00000272091 DUTP33316 252 aaKnown RBP9.96□□□□□ -0.81
SDE2-201ENST00000272091 RPL31P62899 125 aaKnown RBP9.96□□□□□ -0.81
SDE2-201ENST00000272091 NCR3LG1Q68D85 454 aa9.96□□□□□ -0.81
SDE2-201ENST00000272091 LSM10Q969L4 123 aaKnown RBP9.96□□□□□ -0.81
SDE2-201ENST00000272091 ARPC5LQ9BPX5 153 aa9.96□□□□□ -0.81
SDE2-201ENST00000272091 TAS2R3Q9NYW6 316 aa9.96□□□□□ -0.81
SDE2-201ENST00000272091 RPUSD1Q9UJJ7 312 aaKnown RBP9.96□□□□□ -0.81
SDE2-201ENST00000272091 KANTRA0A1W2PQU2 76 aa9.96□□□□□ -0.82
SDE2-201ENST00000272091 hADV38S2A0JD32 116 aa9.96□□□□□ -0.82
SDE2-201ENST00000272091 S1PR2O95136 353 aa9.96□□□□□ -0.82
SDE2-201ENST00000272091 ID3Q02535 119 aa9.96□□□□□ -0.82
SDE2-201ENST00000272091 OR8H3Q8N146 312 aa9.96□□□□□ -0.82
SDE2-201ENST00000272091 FAM216AQ8WUB2 273 aa9.96□□□□□ -0.82
SDE2-201ENST00000272091 RBMXL1Q96E39 390 aaKnown RBP9.96□□□□□ -0.82
SDE2-201ENST00000272091 ABHD14AQ9BUJ0 271 aa9.96□□□□□ -0.82
SDE2-201ENST00000272091 RNF212BA8MTL3 300 aa9.96□□□□□ -0.82
SDE2-201ENST00000272091 LEUTXA8MZ59 168 aa9.96□□□□□ -0.82
SDE2-201ENST00000272091 NDUFB3O43676 98 aa9.96□□□□□ -0.82
SDE2-201ENST00000272091 TMEM50AO95807 157 aa9.96□□□□□ -0.82
SDE2-201ENST00000272091 CLDN1O95832 211 aa9.96□□□□□ -0.82
SDE2-201ENST00000272091 EPHA1P21709 976 aa9.96□□□□□ -0.82
SDE2-201ENST00000272091 GPR12P47775 334 aa9.96□□□□□ -0.82
SDE2-201ENST00000272091 POLR2GP62487 172 aaKnown RBP eCLIP9.96□□□□□ -0.82
SDE2-201ENST00000272091 ZNF816Q0VGE8 651 aaPredicted RBP9.96□□□□□ -0.82
SDE2-201ENST00000272091 AVPI1Q5T686 147 aa9.96□□□□□ -0.82
SDE2-201ENST00000272091 CLEC9AQ6UXN8 241 aa9.96□□□□□ -0.82
SDE2-201ENST00000272091 ZNF66Q6ZN08 573 aa9.96□□□□□ -0.82
SDE2-201ENST00000272091 TCTEX1D2Q8WW35 142 aa9.96□□□□□ -0.82
SDE2-201ENST00000272091 SLC25A6P12236 298 aa9.95□□□□□ -0.82
SDE2-201ENST00000272091 MAGT1Q9H0U3 335 aa9.95□□□□□ -0.82
SDE2-201ENST00000272091 USF3Q68DE3 2245 aa9.95□□□□□ -0.82
SDE2-201ENST00000272091 ABCA4P78363 2273 aa9.95□□□□□ -0.82
SDE2-201ENST00000272091 SAA2-SAA4A0A096LPE2 208 aa9.95□□□□□ -0.82
SDE2-201ENST00000272091 ST8SIA3O43173 380 aa9.95□□□□□ -0.82
SDE2-201ENST00000272091 SAA2P0DJI9 122 aaPredicted RBP9.95□□□□□ -0.82
SDE2-201ENST00000272091 NFYBP25208 207 aa9.95□□□□□ -0.82
SDE2-201ENST00000272091 RPL12P30050 165 aaKnown RBP9.95□□□□□ -0.82
SDE2-201ENST00000272091 LRRC10Q5BKY1 277 aa9.95□□□□□ -0.82
SDE2-201ENST00000272091 DDB2Q92466 427 aa9.95□□□□□ -0.82
SDE2-201ENST00000272091 HSD17B10Q99714 261 aaKnown RBP9.95□□□□□ -0.82
SDE2-201ENST00000272091 ARID1AO14497 2285 aa9.95□□□□□ -0.82
SDE2-201ENST00000272091 NKX2-1P43699 371 aaPredicted RBP9.95□□□□□ -0.82
SDE2-201ENST00000272091 UBA52P62987 128 aaKnown RBP9.95□□□□□ -0.82
SDE2-201ENST00000272091 SPAG16Q8N0X2 631 aa9.95□□□□□ -0.82
SDE2-201ENST00000272091 ZNF843Q8N446 348 aa9.95□□□□□ -0.82
SDE2-201ENST00000272091 C11orf42Q8N5U0 333 aa9.95□□□□□ -0.82
SDE2-201ENST00000272091 GAB2Q9UQC2 676 aa9.95□□□□□ -0.82
SDE2-201ENST00000272091 LAMP3Q9UQV4 416 aa9.95□□□□□ -0.82
SDE2-201ENST00000272091 A0A1B0GU03 582 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 E5RGE8 158 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 GNG10P50151 68 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 PAX9P55771 341 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 H1FXQ92522 213 aaKnown RBP9.94□□□□□ -0.82
SDE2-201ENST00000272091 ZNF714Q96N38 554 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 SPIN2AQ99865 258 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 SPIN2BQ9BPZ2 258 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 ZNF471Q9BX82 626 aaPredicted RBP9.94□□□□□ -0.82
SDE2-201ENST00000272091 RAB1BQ9H0U4 201 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 CACNG5Q9UF02 275 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 NSG2Q9Y328 171 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 A6NNC1 897 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 G6PCP35575 357 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 SLC25A48Q6ZT89 311 aaKnown RBP9.94□□□□□ -0.82
SDE2-201ENST00000272091 STOML3Q8TAV4 291 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 FAM212BQ9NTI7 297 aaPredicted RBP9.94□□□□□ -0.82
SDE2-201ENST00000272091 NDUFA2O43678 99 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 CATR1Q13166 79 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 SMCO1Q147U7 214 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 TMEM155Q4W5P6 130 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 MIDNQ504T8 468 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 CLLU1Q5K131 121 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 HEPN1Q6WQI6 88 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 SCARB1Q8WTV0 552 aa9.94□□□□□ -0.82
SDE2-201ENST00000272091 M0R1X1 148 aa9.93□□□□□ -0.82
SDE2-201ENST00000272091 CDKN1AP38936 164 aa9.93□□□□□ -0.82
SDE2-201ENST00000272091 P2RY1P47900 373 aa9.93□□□□□ -0.82
SDE2-201ENST00000272091 UBTD1Q9HAC8 227 aa9.93□□□□□ -0.82
SDE2-201ENST00000272091 WFDC1Q9HC57 220 aa9.93□□□□□ -0.82
SDE2-201ENST00000272091 F5H0A9 414 aaPredicted RBP9.93□□□□□ -0.82
SDE2-201ENST00000272091 SSSCA1O60232 199 aa9.93□□□□□ -0.82
SDE2-201ENST00000272091 NDUFS7O75251 213 aa9.93□□□□□ -0.82
SDE2-201ENST00000272091 OR10A7Q8NGE5 316 aa9.93□□□□□ -0.82
SDE2-201ENST00000272091 CACNA1BQ00975 2339 aa9.93□□□□□ -0.82
SDE2-201ENST00000272091 SPTBN1Q01082 2364 aaKnown RBP9.93□□□□□ -0.82
SDE2-201ENST00000272091 IGSF23A1L1A6 192 aa9.93□□□□□ -0.82
SDE2-201ENST00000272091 DAOP14920 347 aa9.93□□□□□ -0.82
SDE2-201ENST00000272091 FAM74A1Q5RGS3 127 aa9.93□□□□□ -0.82
SDE2-201ENST00000272091 GAL3ST2Q9H3Q3 398 aa9.93□□□□□ -0.82
SDE2-201ENST00000272091 PLEKHA2Q9HB19 425 aa9.93□□□□□ -0.82
SDE2-201ENST00000272091 RAB9BQ9NP90 201 aa9.93□□□□□ -0.82
SDE2-201ENST00000272091 FBXL17Q9UF56 701 aa9.93□□□□□ -0.82
SDE2-201ENST00000272091 MMP24Q9Y5R2 645 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms