RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 TBL2Q9Y4P3 447 aaKnown RBP13.57□□□□□ -0.24
PRPF40B-201ENST00000261897 HS3ST3A1Q9Y663 406 aa13.57□□□□□ -0.24
PRPF40B-201ENST00000261897 LINC00205P59089 165 aa13.57□□□□□ -0.24
PRPF40B-201ENST00000261897 SLC23A3Q6PIS1 610 aa13.57□□□□□ -0.24
PRPF40B-201ENST00000261897 P2RX4Q99571 388 aa13.57□□□□□ -0.24
PRPF40B-201ENST00000261897 TECRQ9NZ01 308 aaKnown RBP13.57□□□□□ -0.24
PRPF40B-201ENST00000261897 WIPI2Q9Y4P8 454 aa13.57□□□□□ -0.24
PRPF40B-201ENST00000261897 M0QZ24 198 aa13.57□□□□□ -0.24
PRPF40B-201ENST00000261897 CEACAM8P31997 349 aaPredicted RBP13.57□□□□□ -0.24
PRPF40B-201ENST00000261897 SERF2P84101 59 aa13.57□□□□□ -0.24
PRPF40B-201ENST00000261897 HLA-DRB5Q30154 266 aa13.57□□□□□ -0.24
PRPF40B-201ENST00000261897 RNASEH2CQ8TDP1 164 aaKnown RBP13.57□□□□□ -0.24
PRPF40B-201ENST00000261897 ARFGEF3Q5TH69 2177 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 HSBP1O75506 76 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 DRD1P21728 446 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 CAMPP49913 170 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 PSG4Q00888 419 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 ANKRD37Q7Z713 158 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 LRTM2Q8N967 370 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 ZNF114Q8NC26 417 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 WDYHV1Q96HA8 205 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 OR2W1Q9Y3N9 320 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 FRYLO94915 3013 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 UCP1P25874 307 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 RANP62826 216 aaKnown RBP13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 EDDM3AQ14507 147 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 NMSQ5H8A3 153 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 RNASEKQ6P5S7 137 aaKnown RBP13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 STPG4Q8N801 248 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 ZNF501Q96CX3 271 aaPredicted RBP13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 RASL10BQ96S79 203 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 CHD9Q3L8U1 2897 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 CER1O95813 267 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 FGFRL1Q8N441 504 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 OR8G5Q8NG78 346 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 FGFBP3Q8TAT2 258 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 SPACA9Q96E40 222 aaPredicted RBP13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 ATP23Q9Y6H3 246 aa13.56□□□□□ -0.24
PRPF40B-201ENST00000261897 NUP210LQ5VU65 1888 aa13.55□□□□□ -0.24
PRPF40B-201ENST00000261897 GABRG3Q99928 467 aa13.55□□□□□ -0.24
PRPF40B-201ENST00000261897 OR2D2Q9H210 308 aa13.55□□□□□ -0.24
PRPF40B-201ENST00000261897 DEPPQ9NTK1 212 aa13.55□□□□□ -0.24
PRPF40B-201ENST00000261897 SCO2A0A1W2PP80 73 aa13.55□□□□□ -0.24
PRPF40B-201ENST00000261897 NXPH2O95156 264 aa13.55□□□□□ -0.24
PRPF40B-201ENST00000261897 APOA2P02652 100 aa13.55□□□□□ -0.24
PRPF40B-201ENST00000261897 FRMD6-AS1P0C7T7 363 aa13.55□□□□□ -0.24
PRPF40B-201ENST00000261897 LINC00271P0C7V0 271 aa13.55□□□□□ -0.24
PRPF40B-201ENST00000261897 CEBPDP49716 269 aaPredicted RBP13.55□□□□□ -0.24
PRPF40B-201ENST00000261897 LRRC75BQ2VPJ9 315 aa13.55□□□□□ -0.24
PRPF40B-201ENST00000261897 ACTL10Q5JWF8 245 aa13.55□□□□□ -0.24
PRPF40B-201ENST00000261897 FAM53AQ6NSI3 398 aaPredicted RBP13.55□□□□□ -0.24
PRPF40B-201ENST00000261897 ABHD3Q8WU67 409 aa13.55□□□□□ -0.24
PRPF40B-201ENST00000261897 GPR179Q6PRD1 2367 aa13.55□□□□□ -0.24
PRPF40B-201ENST00000261897 IGKV3D-11A0A0A0MRZ8 115 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 C17orf112F2Z3M2 114 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 TIAF1O95411 115 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 CCL3P10147 92 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 GABRA2P47869 451 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 DUSP3P51452 185 aaPredicted RBP13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 RAB35Q15286 201 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 OR2M3Q8NG83 312 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 SFRP2Q96HF1 295 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 TMEM56Q96MV1 263 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 ALKBH7Q9BT30 221 aaPredicted RBP13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 TMEM242Q9NWH2 141 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 BET1LQ9NYM9 111 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 TMEM56-RWDD3S4R434 201 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 AKAP6Q13023 2319 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 PI4KAP42356 2102 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 A0A0J9YW62 118 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 H0Y980 276 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 SYNGR4O95473 234 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 MAJINQ3KP22 176 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 DOLPP1Q86YN1 238 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 TGIF2LYQ8IUE0 185 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 APOBEC3DQ96AK3 386 aaPredicted RBP13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 KCNIP1Q9NZI2 227 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 C19orf25Q9UFG5 118 aaPredicted RBP13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 RARRES3Q9UL19 164 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 LAMTOR2Q9Y2Q5 125 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 WASHC3Q9Y3C0 194 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 A0A1W2PPC4 97 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 ANKRD30BLA7E2S9 258 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 COL8A2P25067 703 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 RPL19P84098 196 aaKnown RBP13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 RELBQ01201 579 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 C9orf50Q5SZB4 431 aa13.54□□□□□ -0.24
PRPF40B-201ENST00000261897 OR7C2O60412 319 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 SRIP30626 198 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 PLP2Q04941 152 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 RSPO1Q2MKA7 263 aaPredicted RBP13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 WIPI1Q5MNZ9 446 aaPredicted RBP13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 PKDREJQ9NTG1 2253 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 TMEM210A6NLX4 147 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 SNAI2O43623 268 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 MRPL33O75394 65 aaKnown RBP13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 ATP6V1FQ16864 119 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 LDLRAD2Q5SZI1 272 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 KMT5CQ86Y97 462 aa13.53□□□□□ -0.24
PRPF40B-201ENST00000261897 CPT1CQ8TCG5 803 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms