RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 VSIG4Q9Y279 399 aa3.73□□□□□ -1.81
VPS13C-202ENST00000261517 A6NDN8 102 aa3.73□□□□□ -1.81
VPS13C-202ENST00000261517 HSPE1P61604 102 aaKnown RBP3.73□□□□□ -1.81
VPS13C-202ENST00000261517 MGAT2Q10469 447 aa3.73□□□□□ -1.81
VPS13C-202ENST00000261517 RNASE6Q93091 150 aaKnown RBP3.73□□□□□ -1.81
VPS13C-202ENST00000261517 SPSB2Q99619 263 aa3.73□□□□□ -1.81
VPS13C-202ENST00000261517 PLA2G3Q9NZ20 509 aa3.73□□□□□ -1.81
VPS13C-202ENST00000261517 PXMP4Q9Y6I8 212 aa3.73□□□□□ -1.81
VPS13C-202ENST00000261517 MYO18BQ8IUG5 2567 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 ITGB1BP1O14713 200 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 C17orf82Q86X59 251 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-202ENST00000261517 GATAD1Q8WUU5 269 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 IMMP1LQ96LU5 166 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 MAP1LC3CQ9BXW4 147 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 COA4Q9NYJ1 87 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 NPIPB6E9PJ23 425 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 J3QR06 171 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 CFPP27918 469 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 RPL27AP46776 148 aaKnown RBP3.72□□□□□ -1.81
VPS13C-202ENST00000261517 ZFP36L1Q07352 338 aaKnown RBP3.72□□□□□ -1.81
VPS13C-202ENST00000261517 FOXB2Q5VYV0 432 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 MOGAT3Q86VF5 341 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 GSX1Q9H4S2 264 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-202ENST00000261517 C19orf67A6NJJ6 358 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 PTBP3O95758 552 aaKnown RBP3.72□□□□□ -1.81
VPS13C-202ENST00000261517 ORM2P19652 201 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 TIMP3P35625 211 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 KIR2DL2P43627 348 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-202ENST00000261517 PSG4Q00888 419 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 BSXQ3C1V8 233 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 DYNLRB2Q8TF09 96 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 C2CD4CQ8TF44 421 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 RALYQ9UKM9 306 aaKnown RBP3.72□□□□□ -1.81
VPS13C-202ENST00000261517 LINC00312Q9Y6C7 94 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 PLXND1Q9Y4D7 1925 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 TMEM14DPA8MWL7 114 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 PAX1P15863 534 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 DYNLT3P51808 116 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 NDUFA6P56556 154 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 ZNF260Q3ZCT1 412 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 POC1AQ8NBT0 407 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 OR5P3Q8WZ94 311 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 FNDC10F2Z333 226 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 TRGC1P0CF51 173 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 CD1BP29016 333 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 GTF2H5Q6ZYL4 71 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 OR10J6PQ8NGY7 276 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 OR52E5Q8NH55 327 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 PRSS50Q9UI38 385 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 LAMA2P24043 3122 aaKnown RBP3.72□□□□□ -1.81
VPS13C-202ENST00000261517 GTF3C1Q12789 2109 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 UPK3AO75631 287 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 B2MP61769 119 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 EBLN2Q6P2I7 272 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 BVESQ8NE79 360 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 IMMP2LQ96T52 175 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 NEURL2Q9BR09 285 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 ANKRD11Q6UB99 2663 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-202ENST00000261517 TLN1Q9Y490 2541 aaKnown RBP3.72□□□□□ -1.81
VPS13C-202ENST00000261517 ZNF735P0CB33 412 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 IGFBP6P24592 240 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-202ENST00000261517 ZNF788Q6ZQV5 615 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 RSRP1Q9BUV0 290 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 GPR132Q9UNW8 380 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 GAPTQ8N292 157 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 CISD1Q9NZ45 108 aaKnown RBP3.72□□□□□ -1.81
VPS13C-202ENST00000261517 FAM90A27PA6NNH2 459 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 E9PLN8 166 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 AP4M1O00189 453 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 MYOD1P15172 320 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 PMCHL1Q16048 86 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 VKORC1Q9BQB6 163 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 OR51M1Q9H341 326 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 CHCHD2Q9Y6H1 151 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-202ENST00000261517 DOCK7Q96N67 2140 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 NTN3O00634 580 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-202ENST00000261517 GATA3P23771 443 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 GFRA1P56159 465 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 EWSR1Q01844 656 aaKnown RBP eCLIP3.72□□□□□ -1.81
VPS13C-202ENST00000261517 RAB32Q13637 225 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 ZXDCQ2QGD7 858 aaPredicted RBP3.72□□□□□ -1.81
VPS13C-202ENST00000261517 Q6ZN92 141 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 EEF1AKMT3Q96AZ1 226 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 CALYQ9NYX4 217 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 NAT8BQ9UHF3 227 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 RPH3ALQ9UNE2 315 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 SNRNP200O75643 2136 aaKnown RBP3.72□□□□□ -1.81
VPS13C-202ENST00000261517 CCL4P13236 92 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 CLDN18P56856 261 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 NUTF2P61970 127 aaKnown RBP3.72□□□□□ -1.81
VPS13C-202ENST00000261517 KHDC1LQ5JSQ8 128 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 GBGT1Q8N5D6 347 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 LHFPL6Q9Y693 200 aa3.72□□□□□ -1.81
VPS13C-202ENST00000261517 LOC102723971A0A1B0GUV8 181 aa3.71□□□□□ -1.81
VPS13C-202ENST00000261517 SIX6O95475 246 aa3.71□□□□□ -1.81
VPS13C-202ENST00000261517 RPL35P42766 123 aaKnown RBP3.71□□□□□ -1.81
VPS13C-202ENST00000261517 KRTDAPP60985 99 aa3.71□□□□□ -1.81
VPS13C-202ENST00000261517 LCN2P80188 198 aa3.71□□□□□ -1.81
VPS13C-202ENST00000261517 TNXAQ16473 311 aa3.71□□□□□ -1.81
VPS13C-202ENST00000261517 SPATA46Q5T0L3 261 aa3.71□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms