RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 IGFBP2P18065 325 aa18.45■□□□□ 0.54
SIX3-201ENST00000260653 NFYBP25208 207 aa18.45■□□□□ 0.54
SIX3-201ENST00000260653 LINC00205P59089 165 aa18.45■□□□□ 0.54
SIX3-201ENST00000260653 SMCO1Q147U7 214 aa18.45■□□□□ 0.54
SIX3-201ENST00000260653 MSMO1Q15800 293 aa18.45■□□□□ 0.54
SIX3-201ENST00000260653 LRRC10Q5BKY1 277 aa18.45■□□□□ 0.54
SIX3-201ENST00000260653 H1FXQ92522 213 aaKnown RBP18.45■□□□□ 0.54
SIX3-201ENST00000260653 RAB1BQ9H0U4 201 aa18.45■□□□□ 0.54
SIX3-201ENST00000260653 KAAG1Q9UBP8 84 aa18.45■□□□□ 0.54
SIX3-201ENST00000260653 KANTRA0A1W2PQU2 76 aa18.45■□□□□ 0.54
SIX3-201ENST00000260653 BCL2L11O43521 198 aa18.45■□□□□ 0.54
SIX3-201ENST00000260653 RAMP3O60896 148 aa18.45■□□□□ 0.54
SIX3-201ENST00000260653 PRAMEF5Q5TYX0 476 aa18.45■□□□□ 0.54
SIX3-201ENST00000260653 SPIN2AQ99865 258 aa18.45■□□□□ 0.54
SIX3-201ENST00000260653 SPIN2BQ9BPZ2 258 aa18.45■□□□□ 0.54
SIX3-201ENST00000260653 IFI27L2Q9H2X8 130 aa18.45■□□□□ 0.54
SIX3-201ENST00000260653 AKAP6Q13023 2319 aa18.44■□□□□ 0.54
SIX3-201ENST00000260653 SPDEFO95238 335 aa18.44■□□□□ 0.54
SIX3-201ENST00000260653 IFNA7P01567 189 aa18.44■□□□□ 0.54
SIX3-201ENST00000260653 GPR12P47775 334 aa18.44■□□□□ 0.54
SIX3-201ENST00000260653 ERVFRD-1P60508 538 aa18.44■□□□□ 0.54
SIX3-201ENST00000260653 IZUMO4Q1ZYL8 232 aa18.44■□□□□ 0.54
SIX3-201ENST00000260653 LINC00574Q9H8X3 128 aa18.44■□□□□ 0.54
SIX3-201ENST00000260653 IDI2-AS1Q9NZ38 188 aa18.44■□□□□ 0.54
SIX3-201ENST00000260653 LAMP3Q9UQV4 416 aa18.44■□□□□ 0.54
SIX3-201ENST00000260653 A0A1W2PPE3 182 aa18.44■□□□□ 0.54
SIX3-201ENST00000260653 PROP1O75360 226 aa18.44■□□□□ 0.54
SIX3-201ENST00000260653 RLN2P04090 185 aa18.44■□□□□ 0.54
SIX3-201ENST00000260653 EPHA1P21709 976 aa18.44■□□□□ 0.54
SIX3-201ENST00000260653 DTX2Q86UW9 622 aa18.44■□□□□ 0.54
SIX3-201ENST00000260653 TCTEX1D2Q8WW35 142 aa18.44■□□□□ 0.54
SIX3-201ENST00000260653 LINC00473A8K010 186 aa18.43■□□□□ 0.54
SIX3-201ENST00000260653 NDUFA2O43678 99 aa18.43■□□□□ 0.54
SIX3-201ENST00000260653 CLDN1O95832 211 aa18.43■□□□□ 0.54
SIX3-201ENST00000260653 BRWD1-AS2P59051 145 aa18.43■□□□□ 0.54
SIX3-201ENST00000260653 MEF2CQ06413 473 aaPredicted RBP18.43■□□□□ 0.54
SIX3-201ENST00000260653 ESCO2Q56NI9 601 aa18.43■□□□□ 0.54
SIX3-201ENST00000260653 AQP10Q96PS8 301 aa18.43■□□□□ 0.54
SIX3-201ENST00000260653 DOCK11Q5JSL3 2073 aa18.43■□□□□ 0.54
SIX3-201ENST00000260653 CLEC18AA5D8T8 446 aa18.43■□□□□ 0.54
SIX3-201ENST00000260653 CCL3L1P16619 93 aa18.43■□□□□ 0.54
SIX3-201ENST00000260653 CATR1Q13166 79 aa18.43■□□□□ 0.54
SIX3-201ENST00000260653 TMEM200BQ69YZ2 307 aa18.43■□□□□ 0.54
SIX3-201ENST00000260653 OR8H3Q8N146 312 aa18.43■□□□□ 0.54
SIX3-201ENST00000260653 CLEC18CQ8NCF0 446 aa18.43■□□□□ 0.54
SIX3-201ENST00000260653 RNASE11Q8TAA1 199 aaKnown RBP18.43■□□□□ 0.54
SIX3-201ENST00000260653 GPR146Q96CH1 333 aa18.43■□□□□ 0.54
SIX3-201ENST00000260653 ABHD14AQ9BUJ0 271 aa18.43■□□□□ 0.54
SIX3-201ENST00000260653 C17orf98A8MV24 154 aa18.42■□□□□ 0.54
SIX3-201ENST00000260653 ST8SIA3O43173 380 aa18.42■□□□□ 0.54
SIX3-201ENST00000260653 IGKV1-5P01602 117 aa18.42■□□□□ 0.54
SIX3-201ENST00000260653 NUP62P37198 522 aaPredicted RBP18.42■□□□□ 0.54
SIX3-201ENST00000260653 AKR1C2P52895 323 aa18.42■□□□□ 0.54
SIX3-201ENST00000260653 CT45A1Q5HYN5 189 aa18.42■□□□□ 0.54
SIX3-201ENST00000260653 AVPI1Q5T686 147 aa18.42■□□□□ 0.54
SIX3-201ENST00000260653 CT45A3Q8NHU0 189 aa18.42■□□□□ 0.54
SIX3-201ENST00000260653 UBQLN2Q9UHD9 624 aa18.42■□□□□ 0.54
SIX3-201ENST00000260653 RCL1Q9Y2P8 373 aaKnown RBP18.42■□□□□ 0.54
SIX3-201ENST00000260653 POMT1Q9Y6A1 747 aa18.42■□□□□ 0.54
SIX3-201ENST00000260653 NXPH3O95157 252 aa18.42■□□□□ 0.54
SIX3-201ENST00000260653 IGHV2-70P01814 119 aa18.42■□□□□ 0.54
SIX3-201ENST00000260653 LPAR6P43657 344 aa18.42■□□□□ 0.54
SIX3-201ENST00000260653 RPL39P5Q59GN2 51 aa18.42■□□□□ 0.54
SIX3-201ENST00000260653 CXorf66Q5JRM2 361 aaPredicted RBP18.42■□□□□ 0.54
SIX3-201ENST00000260653 ALKAL2Q6UX46 152 aa18.42■□□□□ 0.54
SIX3-201ENST00000260653 ZNF471Q9BX82 626 aaPredicted RBP18.42■□□□□ 0.54
SIX3-201ENST00000260653 TAS2R3Q9NYW6 316 aa18.42■□□□□ 0.54
SIX3-201ENST00000260653 HKR1P10072 659 aa18.41■□□□□ 0.54
SIX3-201ENST00000260653 NKX2-1P43699 371 aaPredicted RBP18.41■□□□□ 0.54
SIX3-201ENST00000260653 ZNF816Q0VGE8 651 aaPredicted RBP18.41■□□□□ 0.54
SIX3-201ENST00000260653 SPAG16Q8N0X2 631 aa18.41■□□□□ 0.54
SIX3-201ENST00000260653 HSD17B10Q99714 261 aaKnown RBP18.41■□□□□ 0.54
SIX3-201ENST00000260653 UBTD1Q9HAC8 227 aa18.41■□□□□ 0.54
SIX3-201ENST00000260653 MALRD1Q5VYJ5 2156 aa18.41■□□□□ 0.54
SIX3-201ENST00000260653 GNG10P50151 68 aa18.41■□□□□ 0.54
SIX3-201ENST00000260653 FAM209BQ5JX69 171 aa18.41■□□□□ 0.54
SIX3-201ENST00000260653 ZNF66Q6ZN08 573 aa18.41■□□□□ 0.54
SIX3-201ENST00000260653 Q6ZRM9 215 aa18.41■□□□□ 0.54
SIX3-201ENST00000260653 FAM216AQ8WUB2 273 aa18.41■□□□□ 0.54
SIX3-201ENST00000260653 PCNPQ8WW12 178 aaKnown RBP18.41■□□□□ 0.54
SIX3-201ENST00000260653 ZNF714Q96N38 554 aa18.41■□□□□ 0.54
SIX3-201ENST00000260653 GAL3ST2Q9H3Q3 398 aa18.41■□□□□ 0.54
SIX3-201ENST00000260653 RPUSD1Q9UJJ7 312 aaKnown RBP18.41■□□□□ 0.54
SIX3-201ENST00000260653 F5H0A9 414 aaPredicted RBP18.4■□□□□ 0.54
SIX3-201ENST00000260653 ZNF439Q8NDP4 499 aa18.4■□□□□ 0.54
SIX3-201ENST00000260653 ZFP57Q9NU63 452 aa18.4■□□□□ 0.54
SIX3-201ENST00000260653 PIGBOS1A0A0B4J2F0 54 aa18.4■□□□□ 0.54
SIX3-201ENST00000260653 TMEM238LA0A1B0GVL6 79 aa18.4■□□□□ 0.54
SIX3-201ENST00000260653 RNF224P0DH78 156 aa18.4■□□□□ 0.54
SIX3-201ENST00000260653 C1orf229Q6ZS94 237 aaPredicted RBP18.4■□□□□ 0.54
SIX3-201ENST00000260653 DMBX1Q8NFW5 382 aa18.4■□□□□ 0.54
SIX3-201ENST00000260653 ST8SIA2Q92186 375 aa18.4■□□□□ 0.54
SIX3-201ENST00000260653 LSM10Q969L4 123 aaKnown RBP18.4■□□□□ 0.54
SIX3-201ENST00000260653 MAGT1Q9H0U3 335 aa18.4■□□□□ 0.54
SIX3-201ENST00000260653 E5RGE8 158 aa18.39■□□□□ 0.53
SIX3-201ENST00000260653 M0R1X1 148 aa18.39■□□□□ 0.53
SIX3-201ENST00000260653 ITGB1BP1O14713 200 aa18.39■□□□□ 0.53
SIX3-201ENST00000260653 RPL12P30050 165 aaKnown RBP18.39■□□□□ 0.53
SIX3-201ENST00000260653 DUTP33316 252 aaKnown RBP18.39■□□□□ 0.53
SIX3-201ENST00000260653 ZNF124Q15973 351 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms