RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 CCSO14618 274 aa13.68□□□□□ -0.22
SDCBP-201ENST00000260130 VENTXO95231 258 aa13.68□□□□□ -0.22
SDCBP-201ENST00000260130 MPIG6BO95866 241 aa13.68□□□□□ -0.22
SDCBP-201ENST00000260130 APOC3P02656 99 aa13.68□□□□□ -0.22
SDCBP-201ENST00000260130 IFNA6P05013 189 aa13.68□□□□□ -0.22
SDCBP-201ENST00000260130 LRRC37A5PQ49AS3 106 aa13.68□□□□□ -0.22
SDCBP-201ENST00000260130 HCP5Q6MZN7 132 aa13.68□□□□□ -0.22
SDCBP-201ENST00000260130 INO80EQ8NBZ0 244 aaPredicted RBP13.68□□□□□ -0.22
SDCBP-201ENST00000260130 SEC22AQ96IW7 307 aa13.68□□□□□ -0.22
SDCBP-201ENST00000260130 NCOR1P1Q9H4R4 102 aa13.68□□□□□ -0.22
SDCBP-201ENST00000260130 RNF222A6NCQ9 220 aa13.68□□□□□ -0.22
SDCBP-201ENST00000260130 TSPAN9O75954 239 aa13.68□□□□□ -0.22
SDCBP-201ENST00000260130 TAS2R31P59538 309 aa13.68□□□□□ -0.22
SDCBP-201ENST00000260130 QRFPP83859 136 aa13.68□□□□□ -0.22
SDCBP-201ENST00000260130 PAX5Q02548 391 aa13.68□□□□□ -0.22
SDCBP-201ENST00000260130 UNC119Q13432 240 aa13.68□□□□□ -0.22
SDCBP-201ENST00000260130 DEFB112Q30KQ8 113 aa13.68□□□□□ -0.22
SDCBP-201ENST00000260130 BRICD5Q6PL45 260 aa13.68□□□□□ -0.22
SDCBP-201ENST00000260130 PLPPR1Q8TBJ4 325 aa13.68□□□□□ -0.22
SDCBP-201ENST00000260130 OR6C3Q9NZP0 311 aa13.68□□□□□ -0.22
SDCBP-201ENST00000260130 RCC2Q9P258 522 aaKnown RBP13.68□□□□□ -0.22
SDCBP-201ENST00000260130 A0A1W2PRD5 423 aa13.67□□□□□ -0.22
SDCBP-201ENST00000260130 A0A1W2PRF3 423 aa13.67□□□□□ -0.22
SDCBP-201ENST00000260130 A0A1W2PRM7 423 aa13.67□□□□□ -0.22
SDCBP-201ENST00000260130 TOR1AO14656 332 aa13.67□□□□□ -0.22
SDCBP-201ENST00000260130 NPFFO15130 113 aa13.67□□□□□ -0.22
SDCBP-201ENST00000260130 IGHV1-8P0DP01 117 aa13.67□□□□□ -0.22
SDCBP-201ENST00000260130 HRH1P35367 487 aa13.67□□□□□ -0.22
SDCBP-201ENST00000260130 FAM74A1Q5RGS3 127 aa13.67□□□□□ -0.22
SDCBP-201ENST00000260130 ZNF565Q8N9K5 539 aa13.67□□□□□ -0.22
SDCBP-201ENST00000260130 TMEM59Q9BXS4 323 aa13.67□□□□□ -0.22
SDCBP-201ENST00000260130 GAL3ST2Q9H3Q3 398 aa13.67□□□□□ -0.22
SDCBP-201ENST00000260130 TMEM14DPA8MWL7 114 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 FAM25EA8MYX2 175 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 DUS4LO95620 317 aaKnown RBP13.66□□□□□ -0.22
SDCBP-201ENST00000260130 OR52W1Q6IF63 320 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 OR2W3Q7Z3T1 314 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 PNKDQ8N490 385 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 GVQW1Q8N7I0 195 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 OR10R2Q8NGX6 335 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 NEK7Q8TDX7 302 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 NUDCD2Q8WVJ2 157 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 PRDM13Q9H4Q3 707 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 A0A0U1RQK1 487 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 MDFIC2A0A1B0GVS7 189 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 FUT3P21217 361 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 VAMP1P23763 118 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 RBM39Q14498 530 aaKnown RBP13.66□□□□□ -0.22
SDCBP-201ENST00000260130 SLC35E4Q6ICL7 350 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 UQCC3Q6UW78 93 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 ZDHHC16Q969W1 377 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 MRGPRFQ96AM1 343 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 ARPC5LQ9BPX5 153 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 ESM1Q9NQ30 184 aa13.66□□□□□ -0.22
SDCBP-201ENST00000260130 GNB3P16520 340 aa13.65□□□□□ -0.22
SDCBP-201ENST00000260130 COX7A1P24310 79 aa13.65□□□□□ -0.22
SDCBP-201ENST00000260130 OR13D1Q8NGV5 346 aa13.65□□□□□ -0.22
SDCBP-201ENST00000260130 TMEM158Q8WZ71 300 aa13.65□□□□□ -0.22
SDCBP-201ENST00000260130 FAM96BQ9Y3D0 163 aa13.65□□□□□ -0.22
SDCBP-201ENST00000260130 GLAP06280 429 aa13.65□□□□□ -0.22
SDCBP-201ENST00000260130 AKR1C4P17516 323 aa13.65□□□□□ -0.22
SDCBP-201ENST00000260130 SAA4P35542 130 aa13.65□□□□□ -0.22
SDCBP-201ENST00000260130 CYCSP99999 105 aaKnown RBP13.65□□□□□ -0.22
SDCBP-201ENST00000260130 FAM189A2Q15884 450 aa13.65□□□□□ -0.22
SDCBP-201ENST00000260130 ACTBL2Q562R1 376 aa13.65□□□□□ -0.22
SDCBP-201ENST00000260130 OR13A1Q8NGR1 328 aa13.65□□□□□ -0.22
SDCBP-201ENST00000260130 CASTOR1Q8WTX7 329 aa13.65□□□□□ -0.22
SDCBP-201ENST00000260130 TM2D1Q9BX74 207 aa13.65□□□□□ -0.22
SDCBP-201ENST00000260130 TMEM30CPA0ZSE6 113 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 ZNF729A6NN14 1252 aaPredicted RBP13.64□□□□□ -0.23
SDCBP-201ENST00000260130 PDCD6O75340 191 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 GSTP1P09211 210 aaKnown RBP13.64□□□□□ -0.23
SDCBP-201ENST00000260130 GLP1RP43220 463 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 MIDNQ504T8 468 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 HEPN1Q6WQI6 88 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 Q6YL49 198 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 KCTD9Q7L273 389 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 OR4K15Q8NH41 348 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 KCNK7Q9Y2U2 307 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 KBTBD11-OT1A0A1B0GTJ5 212 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 RAB19A4D1S5 217 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 C5orf51A6NDU8 294 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 MPTX1A8MV57 137 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 NUPL2O15504 423 aaKnown RBP13.64□□□□□ -0.23
SDCBP-201ENST00000260130 MMP23AO75900 390 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 CGB3P0DN86 165 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 CGB7P0DN87 165 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 PSMB6P28072 239 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 DEFA5Q01523 94 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 C17orf58Q2M2W7 97 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 ZNF497Q6ZNH5 498 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 HOGA1Q86XE5 327 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 ADAD2Q8NCV1 583 aaKnown RBP13.64□□□□□ -0.23
SDCBP-201ENST00000260130 BPIFCQ8NFQ6 507 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 MARC2Q969Z3 335 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 MDFIQ99750 246 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 URM1Q9BTM9 101 aaKnown RBP13.64□□□□□ -0.23
SDCBP-201ENST00000260130 NMES1Q9C002 83 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 TMEM133Q9H2Q1 129 aa13.64□□□□□ -0.23
SDCBP-201ENST00000260130 CHMP1AQ9HD42 196 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms