RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 MPV17P39210 176 aa12.79□□□□□ -0.36
DDX56-201ENST00000258772 ARG2P78540 354 aa12.79□□□□□ -0.36
DDX56-201ENST00000258772 AESQ08117 197 aa12.79□□□□□ -0.36
DDX56-201ENST00000258772 ZNF816Q0VGE8 651 aaPredicted RBP12.79□□□□□ -0.36
DDX56-201ENST00000258772 OR2B11Q5JQS5 317 aa12.79□□□□□ -0.36
DDX56-201ENST00000258772 WDR25Q64LD2 544 aaPredicted RBP12.79□□□□□ -0.36
DDX56-201ENST00000258772 C11orf53Q8IXP5 236 aa12.79□□□□□ -0.36
DDX56-201ENST00000258772 OR52L2PQ8NGH6 319 aa12.79□□□□□ -0.36
DDX56-201ENST00000258772 KLF14Q8TD94 323 aaPredicted RBP12.79□□□□□ -0.36
DDX56-201ENST00000258772 OBP2BQ9NPH6 170 aa12.79□□□□□ -0.36
DDX56-201ENST00000258772 PRR14LQ5THK1 2151 aa12.79□□□□□ -0.36
DDX56-201ENST00000258772 OOEPA6NGQ2 149 aa12.79□□□□□ -0.36
DDX56-201ENST00000258772 LRRC30A6NM36 301 aa12.79□□□□□ -0.36
DDX56-201ENST00000258772 CDX4O14627 284 aaPredicted RBP12.79□□□□□ -0.36
DDX56-201ENST00000258772 WNT9BO14905 357 aa12.79□□□□□ -0.36
DDX56-201ENST00000258772 BRWD1-AS2P59051 145 aa12.79□□□□□ -0.36
DDX56-201ENST00000258772 SLC35E4Q6ICL7 350 aa12.79□□□□□ -0.36
DDX56-201ENST00000258772 DHRS13Q6UX07 377 aa12.79□□□□□ -0.36
DDX56-201ENST00000258772 ZNF826PQ6ZT77 177 aa12.79□□□□□ -0.36
DDX56-201ENST00000258772 CXorf67Q86X51 503 aaPredicted RBP12.79□□□□□ -0.36
DDX56-201ENST00000258772 C1orf87Q8N0U7 546 aa12.79□□□□□ -0.36
DDX56-201ENST00000258772 ZNF808Q8N4W9 903 aaPredicted RBP12.79□□□□□ -0.36
DDX56-201ENST00000258772 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.79□□□□□ -0.36
DDX56-201ENST00000258772 ODAMA1E959 279 aa12.78□□□□□ -0.36
DDX56-201ENST00000258772 MLNRO43193 412 aa12.78□□□□□ -0.36
DDX56-201ENST00000258772 HBZP02008 142 aa12.78□□□□□ -0.36
DDX56-201ENST00000258772 S100A2P29034 98 aa12.78□□□□□ -0.36
DDX56-201ENST00000258772 HNF4GQ14541 408 aa12.78□□□□□ -0.36
DDX56-201ENST00000258772 PYY3Q5JQD4 70 aa12.78□□□□□ -0.36
DDX56-201ENST00000258772 INO80CQ6PI98 192 aaPredicted RBP12.78□□□□□ -0.36
DDX56-201ENST00000258772 GCNT2Q8N0V5 402 aa12.78□□□□□ -0.36
DDX56-201ENST00000258772 ABHD5Q8WTS1 349 aa12.78□□□□□ -0.36
DDX56-201ENST00000258772 TRAV20A0A0B4J274 112 aa12.78□□□□□ -0.36
DDX56-201ENST00000258772 CD81P60033 236 aa12.78□□□□□ -0.36
DDX56-201ENST00000258772 CATR1Q13166 79 aa12.78□□□□□ -0.36
DDX56-201ENST00000258772 ATP6V1FQ16864 119 aa12.78□□□□□ -0.36
DDX56-201ENST00000258772 ACSM6Q6P461 480 aa12.78□□□□□ -0.36
DDX56-201ENST00000258772 TMPRSS7Q7RTY8 843 aa12.78□□□□□ -0.36
DDX56-201ENST00000258772 CLN8Q9UBY8 286 aa12.78□□□□□ -0.36
DDX56-201ENST00000258772 PMS2P5A8MQ11 134 aa12.77□□□□□ -0.36
DDX56-201ENST00000258772 C17orf98A8MV24 154 aa12.77□□□□□ -0.36
DDX56-201ENST00000258772 SEC14L6B5MCN3 397 aa12.77□□□□□ -0.36
DDX56-201ENST00000258772 S1PR2O95136 353 aa12.77□□□□□ -0.36
DDX56-201ENST00000258772 TRGC1P0CF51 173 aa12.77□□□□□ -0.36
DDX56-201ENST00000258772 PLA2G5P39877 138 aa12.77□□□□□ -0.36
DDX56-201ENST00000258772 HOXA4Q00056 320 aaPredicted RBP12.77□□□□□ -0.36
DDX56-201ENST00000258772 TMEM178AQ8NBL3 297 aa12.77□□□□□ -0.36
DDX56-201ENST00000258772 FRZBQ92765 325 aa12.77□□□□□ -0.36
DDX56-201ENST00000258772 COQ2Q96H96 371 aa12.77□□□□□ -0.36
DDX56-201ENST00000258772 SSX3Q99909 188 aa12.77□□□□□ -0.36
DDX56-201ENST00000258772 PCNX2A6NKB5 2137 aa12.77□□□□□ -0.37
DDX56-201ENST00000258772 TRBV24-1A0A075B6N3 115 aa12.77□□□□□ -0.37
DDX56-201ENST00000258772 OPN1MWP04001 364 aa12.77□□□□□ -0.37
DDX56-201ENST00000258772 OPN1MW2P0DN77 364 aa12.77□□□□□ -0.37
DDX56-201ENST00000258772 OPN1MW3P0DN78 364 aa12.77□□□□□ -0.37
DDX56-201ENST00000258772 NKX6-1P78426 367 aaPredicted RBP12.77□□□□□ -0.37
DDX56-201ENST00000258772 PMP22Q01453 160 aa12.77□□□□□ -0.37
DDX56-201ENST00000258772 MEF2BQ02080 365 aaPredicted RBP12.77□□□□□ -0.37
DDX56-201ENST00000258772 Q6ZR03 302 aa12.77□□□□□ -0.37
DDX56-201ENST00000258772 NINJ1Q92982 152 aa12.77□□□□□ -0.37
DDX56-201ENST00000258772 TMEM147Q9BVK8 224 aa12.77□□□□□ -0.37
DDX56-201ENST00000258772 CTDSP1Q9GZU7 261 aa12.77□□□□□ -0.37
DDX56-201ENST00000258772 NAT8Q9UHE5 227 aa12.77□□□□□ -0.37
DDX56-201ENST00000258772 TGOLN2O43493 480 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 ZG16O60844 167 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 SOD3P08294 240 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 SP9P0CG40 484 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 PLA2G2CQ5R387 149 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 HES3Q5TGS1 186 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 GFI1BQ5VTD9 330 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 ACP7Q6ZNF0 438 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 Q6ZT83 130 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 FAM214BQ7L5A3 538 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 MRGPRDQ8TDS7 321 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 SMIM7Q9BQ49 75 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 AGMATQ9BSE5 352 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 MRPL37Q9BZE1 423 aaKnown RBP12.76□□□□□ -0.37
DDX56-201ENST00000258772 CLCF1Q9UBD9 225 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.76□□□□□ -0.37
DDX56-201ENST00000258772 CTXND1A0A1B0GTU2 59 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 PPP1R2P9O14990 202 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 HMGB3O15347 200 aaKnown RBP12.76□□□□□ -0.37
DDX56-201ENST00000258772 TFF1P04155 84 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 GABRA2P47869 451 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 BTNL3Q6UXE8 466 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 OR10P1Q8NGE3 313 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 DTD1Q8TEA8 209 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 GPR61Q9BZJ8 451 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 SLC25A22Q9H936 323 aa12.76□□□□□ -0.37
DDX56-201ENST00000258772 ELOA3CA0A087WX78 387 aaPredicted RBP12.75□□□□□ -0.37
DDX56-201ENST00000258772 PHOX2AO14813 284 aa12.75□□□□□ -0.37
DDX56-201ENST00000258772 RAB29O14966 203 aa12.75□□□□□ -0.37
DDX56-201ENST00000258772 CLDN14O95500 239 aa12.75□□□□□ -0.37
DDX56-201ENST00000258772 TMEM241Q24JQ0 296 aa12.75□□□□□ -0.37
DDX56-201ENST00000258772 HIST3H2BBQ8N257 126 aa12.75□□□□□ -0.37
DDX56-201ENST00000258772 OR10G9Q8NGN4 311 aa12.75□□□□□ -0.37
DDX56-201ENST00000258772 OR10G7Q8NGN6 311 aa12.75□□□□□ -0.37
DDX56-201ENST00000258772 PRR7Q8TB68 274 aa12.75□□□□□ -0.37
DDX56-201ENST00000258772 CXXC4Q9H2H0 198 aa12.75□□□□□ -0.37
DDX56-201ENST00000258772 DMRT1Q9Y5R6 373 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms