RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 ECI1P42126 302 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 HLA-DRB3P79483 266 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 COL10A1Q03692 680 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 USF2Q15853 346 aaPredicted RBP12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 CYB561D1Q8N8Q1 229 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 NINJ1Q92982 152 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 RAB39BQ96DA2 213 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 PLK3Q9H4B4 646 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 CACNA1AO00555 2505 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 H3BQ15 152 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 PGLYRP1O75594 196 aaPredicted RBP12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 CCL8P80075 99 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 IGFL2Q6UWQ7 119 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 HEPN1Q6WQI6 88 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 TGIF2LYQ8IUE0 185 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 NECAP1Q8NC96 275 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 OR2W1Q9Y3N9 320 aa12.32□□□□□ -0.44
TRAFD1-201ENST00000257604 HMGB3O15347 200 aaKnown RBP12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 GPR137BO60478 399 aa12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 IGKV3-15P01624 115 aa12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 S100GP29377 79 aa12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 RAB5CP51148 216 aa12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 FGF8P55075 233 aaPredicted RBP12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 RHEBQ15382 184 aa12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 Q6P435 159 aa12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 Q8WTZ3 238 aa12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 OR2V2Q96R30 315 aa12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 GINS3Q9BRX5 216 aa12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 TMEM222Q9H0R3 208 aa12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 OR2D2Q9H210 308 aa12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 TUBA4BQ9H853 241 aa12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 PLSCR4Q9NRQ2 329 aa12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 SVEP1Q4LDE5 3571 aa12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 ZFYVE26Q68DK2 2539 aa12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 A0A0G2JRQ6 117 aa12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 TUBG1P23258 451 aa12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 ERVFRD-1P60508 538 aa12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 TMEM267Q0VDI3 215 aaPredicted RBP12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 PCSK4Q6UW60 755 aa12.31□□□□□ -0.44
TRAFD1-201ENST00000257604 ZFP92A6NM28 416 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 ATP6V0CP27449 155 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 RND3P61587 244 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 GAMTQ14353 236 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 SPACA3Q8IXA5 215 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 PRRG2O14669 202 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 CHST1O43916 411 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 PGA5P0DJD9 388 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 GPX4P36969 197 aaPredicted RBP12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 EWSR1Q01844 656 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 C1orf185Q5T7R7 199 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 WDR82Q6UXN9 313 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 Q6ZS92 163 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 OR5T1Q8NG75 326 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 WFIKKN1Q96NZ8 548 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 RBFOX3A6NFN3 312 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 EGR1P18146 543 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 DLK1P80370 383 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 SSX2Q16385 188 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 ZNF880Q6PDB4 577 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 SAXO1Q8IYX7 474 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 SELENOHQ8IZQ5 122 aaKnown RBP12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 POM121Q96HA1 1249 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 GNG12Q9UBI6 72 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 CACNG5Q9UF02 275 aa12.3□□□□□ -0.44
TRAFD1-201ENST00000257604 IQCF6A8MYZ5 107 aa12.29□□□□□ -0.44
TRAFD1-201ENST00000257604 SOD3P08294 240 aa12.29□□□□□ -0.44
TRAFD1-201ENST00000257604 HOXA5P20719 270 aa12.29□□□□□ -0.44
TRAFD1-201ENST00000257604 DUX4L9Q6RFH8 374 aaPredicted RBP12.29□□□□□ -0.44
TRAFD1-201ENST00000257604 ITLN1Q8WWA0 313 aa12.29□□□□□ -0.44
TRAFD1-201ENST00000257604 PKIBQ9C010 78 aa12.29□□□□□ -0.44
TRAFD1-201ENST00000257604 ARV1Q9H2C2 271 aa12.29□□□□□ -0.44
TRAFD1-201ENST00000257604 CXXC4Q9H2H0 198 aa12.29□□□□□ -0.44
TRAFD1-201ENST00000257604 GAR1Q9NY12 217 aaKnown RBP12.29□□□□□ -0.44
TRAFD1-201ENST00000257604 PSG11Q9UQ72 335 aa12.29□□□□□ -0.44
TRAFD1-201ENST00000257604 RTP5Q14D33 572 aa12.29□□□□□ -0.44
TRAFD1-201ENST00000257604 TMEM171Q8WVE6 324 aa12.29□□□□□ -0.44
TRAFD1-201ENST00000257604 IGSF23A1L1A6 192 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 C12orf77C9JDV5 145 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 K7N7A8 449 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 CYB5R3P00387 301 aaPredicted RBP12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 NBL1P41271 181 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 LCN15Q6UWW0 184 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 OR13A1Q8NGR1 328 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 OR5C1Q8NGR4 320 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 GALMQ96C23 342 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 GALNT14Q96FL9 552 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 GNG13Q9P2W3 67 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 TRGV8A0A0C4DH27 118 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 SOX15O60248 233 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 HBZP02008 142 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 CRYABP02511 175 aaKnown RBP12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 F2RP25116 425 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 RAB11AP62491 216 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 ZNF429Q86V71 674 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 C18orf12Q96KH6 178 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 SNX22Q96L94 193 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 SSX3Q99909 188 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 RYDENQ9NUL5 291 aaKnown RBP12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 DMRT1Q9Y5R6 373 aa12.28□□□□□ -0.44
TRAFD1-201ENST00000257604 SLC25A15Q9Y619 301 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms