RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 KCNIP1Q9NZI2 227 aa10.9□□□□□ -0.66
VEGFA-201ENST00000230480 AMMECR1Q9Y4X0 333 aaPredicted RBP10.9□□□□□ -0.66
VEGFA-201ENST00000230480 SAA2-SAA4A0A096LPE2 208 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 TRDCB7Z8K6 153 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 ITGB1BP1O14713 200 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 IGKV1D-33P01593 117 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 IGKV1-33P01594 117 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 SAA2P0DJI9 122 aaPredicted RBP10.89□□□□□ -0.67
VEGFA-201ENST00000230480 BRS3P32247 399 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 ASAH1Q13510 395 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 HNF4GQ14541 408 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 RPL39P5Q59GN2 51 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 CCDC144NLQ6NUI1 221 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 MOB1BQ7L9L4 216 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 CCDC28AQ8IWP9 274 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 IZUMO1Q8IYV9 350 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 LYG1Q8N1E2 194 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 C5orf56Q8N8D9 126 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 IL1F10Q8WWZ1 152 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 ABHD14BQ96IU4 210 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 NABP2Q9BQ15 211 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 CABLES2Q9BTV7 478 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 ABHD14AQ9BUJ0 271 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 MRPL20Q9BYC9 149 aaKnown RBP10.89□□□□□ -0.67
VEGFA-201ENST00000230480 NPFFR1Q9GZQ6 430 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 PITPNC1Q9UKF7 332 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 SPATA2Q9UM82 520 aa10.89□□□□□ -0.67
VEGFA-201ENST00000230480 TET2Q6N021 2002 aaPredicted RBP10.89□□□□□ -0.67
VEGFA-201ENST00000230480 TRBV6-7A0A0A0MS04 114 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 TMEM235A6NFC5 223 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 CT45A6P0DMU7 189 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 CT45A5P0DMU8 189 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 CT45A7P0DMV0 189 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 HLA-DMAP28067 261 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 AP2S1P53680 142 aaPredicted RBP10.88□□□□□ -0.67
VEGFA-201ENST00000230480 F2RL1P55085 397 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 SRSF7Q16629 238 aaKnown RBP eCLIP10.88□□□□□ -0.677e-11■□□□□ 9.1
VEGFA-201ENST00000230480 PRR31Q5SQ13 230 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 HACD4Q5VWC8 232 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 C16orf82Q7Z2V1 217 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 MOB3BQ86TA1 216 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 KLHDC1Q8N7A1 406 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 Q8N9W7 124 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 OR4C13Q8NGP0 309 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 ZFAND1Q8TCF1 268 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 NUDCD2Q8WVJ2 157 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 SDHCQ99643 169 aaPredicted RBP10.88□□□□□ -0.67
VEGFA-201ENST00000230480 ABCG5Q9H222 651 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 CHMP1AQ9HD42 196 aaPredicted RBP10.88□□□□□ -0.67
VEGFA-201ENST00000230480 RAB18Q9NP72 206 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 SLC23A1Q9UHI7 598 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 TBC1D24Q9ULP9 559 aa10.88□□□□□ -0.67
VEGFA-201ENST00000230480 DNAH3Q8TD57 4116 aa10.87□□□□□ -0.67
VEGFA-201ENST00000230480 LOC105371267A0A1B0GV96 52 aa10.87□□□□□ -0.67
VEGFA-201ENST00000230480 METTL21EPA6NDL7 271 aa10.87□□□□□ -0.67
VEGFA-201ENST00000230480 SERPINE3A8MV23 424 aa10.87□□□□□ -0.67
VEGFA-201ENST00000230480 SHOXO15266 292 aa10.87□□□□□ -0.67
VEGFA-201ENST00000230480 FABP7O15540 132 aa10.87□□□□□ -0.67
VEGFA-201ENST00000230480 CNTFRP26992 372 aa10.87□□□□□ -0.67
VEGFA-201ENST00000230480 CD1BP29016 333 aa10.87□□□□□ -0.67
VEGFA-201ENST00000230480 CEACAM6P40199 344 aa10.87□□□□□ -0.67
VEGFA-201ENST00000230480 MNDAP41218 407 aa10.87□□□□□ -0.67
VEGFA-201ENST00000230480 SCAND1P57086 179 aa10.87□□□□□ -0.67
VEGFA-201ENST00000230480 ABCA11PQ4W5N1 156 aa10.87□□□□□ -0.67
VEGFA-201ENST00000230480 DTX3Q8N9I9 347 aa10.87□□□□□ -0.67
VEGFA-201ENST00000230480 SLC25A46Q96AG3 418 aa10.87□□□□□ -0.67
VEGFA-201ENST00000230480 PRSS22Q9GZN4 317 aa10.87□□□□□ -0.67
VEGFA-201ENST00000230480 RDH8Q9NYR8 311 aa10.87□□□□□ -0.67
VEGFA-201ENST00000230480 RNF150Q9ULK6 438 aa10.87□□□□□ -0.67
VEGFA-201ENST00000230480 ETV7Q9Y603 341 aa10.87□□□□□ -0.67
VEGFA-201ENST00000230480 LPLP06858 475 aa10.86□□□□□ -0.67
VEGFA-201ENST00000230480 FAM106CPP0CH98 169 aa10.86□□□□□ -0.67
VEGFA-201ENST00000230480 CD28P10747 220 aa10.86□□□□□ -0.67
VEGFA-201ENST00000230480 RAB25P57735 213 aa10.86□□□□□ -0.67
VEGFA-201ENST00000230480 IDO2Q6ZQW0 420 aa10.86□□□□□ -0.67
VEGFA-201ENST00000230480 TGIF2LXQ8IUE1 241 aa10.86□□□□□ -0.67
VEGFA-201ENST00000230480 FAM71E2Q8N5Q1 922 aa10.86□□□□□ -0.67
VEGFA-201ENST00000230480 C11orf44Q8N8P7 122 aa10.86□□□□□ -0.67
VEGFA-201ENST00000230480 OR4A4PQ8NGN8 299 aa10.86□□□□□ -0.67
VEGFA-201ENST00000230480 AUNIPQ9H7T9 357 aa10.86□□□□□ -0.67
VEGFA-201ENST00000230480 ABRACLQ9P1F3 81 aa10.86□□□□□ -0.67
VEGFA-201ENST00000230480 TRAV18A0A075B6X5 111 aa10.85□□□□□ -0.67
VEGFA-201ENST00000230480 IGLV2-14P01704 120 aa10.85□□□□□ -0.67
VEGFA-201ENST00000230480 EIF4EP06730 217 aaKnown RBP10.85□□□□□ -0.67
VEGFA-201ENST00000230480 GSTP1P09211 210 aaKnown RBP10.85□□□□□ -0.67
VEGFA-201ENST00000230480 TMEM11P17152 192 aa10.85□□□□□ -0.67
VEGFA-201ENST00000230480 DTYMKP23919 212 aa10.85□□□□□ -0.67
VEGFA-201ENST00000230480 GLDNQ6ZMI3 551 aaPredicted RBP10.85□□□□□ -0.67
VEGFA-201ENST00000230480 H1FOOQ8IZA3 346 aaPredicted RBP10.85□□□□□ -0.67
VEGFA-201ENST00000230480 GVQW1Q8N7I0 195 aa10.85□□□□□ -0.67
VEGFA-201ENST00000230480 GDPD1Q8N9F7 314 aa10.85□□□□□ -0.67
VEGFA-201ENST00000230480 ZNF383Q8NA42 475 aa10.85□□□□□ -0.67
VEGFA-201ENST00000230480 OR2T6Q8NHC8 308 aa10.85□□□□□ -0.67
VEGFA-201ENST00000230480 RAB9BQ9NP90 201 aa10.85□□□□□ -0.67
VEGFA-201ENST00000230480 MEGF8Q7Z7M0 2845 aa10.85□□□□□ -0.67
VEGFA-201ENST00000230480 FGF16O43320 207 aa10.84□□□□□ -0.67
VEGFA-201ENST00000230480 TSPAN15O95858 294 aa10.84□□□□□ -0.67
VEGFA-201ENST00000230480 IGHG2P01859 326 aa10.84□□□□□ -0.67
VEGFA-201ENST00000230480 HLA-DQB1P01920 261 aa10.84□□□□□ -0.67
VEGFA-201ENST00000230480 VSIG10L2P0DP72 767 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms