RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 CCL3L1P16619 93 aa13.81□□□□□ -0.2
TVP23C-201ENST00000225576 DLX6P56179 175 aa13.81□□□□□ -0.2
TVP23C-201ENST00000225576 UTF1Q5T230 341 aa13.81□□□□□ -0.2
TVP23C-201ENST00000225576 BTNL3Q6UXE8 466 aa13.81□□□□□ -0.2
TVP23C-201ENST00000225576 KCNRGQ8N5I3 272 aa13.81□□□□□ -0.2
TVP23C-201ENST00000225576 INO80EQ8NBZ0 244 aaPredicted RBP13.81□□□□□ -0.2
TVP23C-201ENST00000225576 OR8B3Q8NGG8 313 aa13.81□□□□□ -0.2
TVP23C-201ENST00000225576 TCTEX1D2Q8WW35 142 aa13.81□□□□□ -0.2
TVP23C-201ENST00000225576 DCUN1D4Q92564 292 aa13.81□□□□□ -0.2
TVP23C-201ENST00000225576 NEIL1Q96FI4 390 aaPredicted RBP13.81□□□□□ -0.2
TVP23C-201ENST00000225576 OR8B2Q96RD0 313 aa13.81□□□□□ -0.2
TVP23C-201ENST00000225576 ARL6Q9H0F7 186 aa13.81□□□□□ -0.2
TVP23C-201ENST00000225576 DSCAML1Q8TD84 2053 aa13.8□□□□□ -0.2
TVP23C-201ENST00000225576 J3QKU1 62 aa13.8□□□□□ -0.2
TVP23C-201ENST00000225576 DEDDO75618 318 aa13.8□□□□□ -0.2
TVP23C-201ENST00000225576 MBPP02686 304 aaPredicted RBP13.8□□□□□ -0.2
TVP23C-201ENST00000225576 DUTP33316 252 aaKnown RBP13.8□□□□□ -0.2
TVP23C-201ENST00000225576 LPAR6P43657 344 aa13.8□□□□□ -0.2
TVP23C-201ENST00000225576 S100A10P60903 97 aa13.8□□□□□ -0.2
TVP23C-201ENST00000225576 SMCO1Q147U7 214 aa13.8□□□□□ -0.2
TVP23C-201ENST00000225576 THOC7Q6I9Y2 204 aaKnown RBP13.8□□□□□ -0.2
TVP23C-201ENST00000225576 SLC25A48Q6ZT89 311 aaKnown RBP13.8□□□□□ -0.2
TVP23C-201ENST00000225576 OR1S1Q8NH92 325 aa13.8□□□□□ -0.2
TVP23C-201ENST00000225576 LEAP2Q969E1 77 aa13.8□□□□□ -0.2
TVP23C-201ENST00000225576 OR5AC2Q9NZP5 309 aa13.8□□□□□ -0.2
TVP23C-201ENST00000225576 HECTD1Q9ULT8 2610 aa13.8□□□□□ -0.2
TVP23C-201ENST00000225576 A0A1B0GU03 582 aa13.8□□□□□ -0.2
TVP23C-201ENST00000225576 RAB29O14966 203 aa13.8□□□□□ -0.2
TVP23C-201ENST00000225576 ST8SIA3O43173 380 aa13.8□□□□□ -0.2
TVP23C-201ENST00000225576 IGHV3-7P01780 117 aa13.8□□□□□ -0.2
TVP23C-201ENST00000225576 BRWD1-AS2P59051 145 aa13.8□□□□□ -0.2
TVP23C-201ENST00000225576 SRSF1Q07955 248 aaKnown RBP eCLIP13.8□□□□□ -0.2
TVP23C-201ENST00000225576 C8orf46Q8TAG6 207 aa13.8□□□□□ -0.2
TVP23C-201ENST00000225576 CD300LFQ8TDQ1 290 aa13.8□□□□□ -0.2
TVP23C-201ENST00000225576 IGFBPL1Q8WX77 278 aa13.8□□□□□ -0.2
TVP23C-201ENST00000225576 GPR146Q96CH1 333 aa13.8□□□□□ -0.2
TVP23C-201ENST00000225576 LINC00473A8K010 186 aa13.79□□□□□ -0.2
TVP23C-201ENST00000225576 C17orf98A8MV24 154 aa13.79□□□□□ -0.2
TVP23C-201ENST00000225576 K7EPK0 472 aa13.79□□□□□ -0.2
TVP23C-201ENST00000225576 ATG12O94817 140 aa13.79□□□□□ -0.2
TVP23C-201ENST00000225576 NUP62P37198 522 aaPredicted RBP13.79□□□□□ -0.2
TVP23C-201ENST00000225576 AP2S1P53680 142 aaPredicted RBP13.79□□□□□ -0.2
TVP23C-201ENST00000225576 WDR25Q64LD2 544 aaPredicted RBP13.79□□□□□ -0.2
TVP23C-201ENST00000225576 TEX261Q6UWH6 196 aa13.79□□□□□ -0.2
TVP23C-201ENST00000225576 ZNF767PQ75MW2 155 aa13.79□□□□□ -0.2
TVP23C-201ENST00000225576 ODF3L1Q8IXM7 274 aa13.79□□□□□ -0.2
TVP23C-201ENST00000225576 SPAG16Q8N0X2 631 aa13.79□□□□□ -0.2
TVP23C-201ENST00000225576 FAM71E2Q8N5Q1 922 aa13.79□□□□□ -0.2
TVP23C-201ENST00000225576 C8orf31Q8N9H6 132 aa13.79□□□□□ -0.2
TVP23C-201ENST00000225576 PATZ1Q9HBE1 687 aaKnown RBP13.79□□□□□ -0.2
TVP23C-201ENST00000225576 POMT1Q9Y6A1 747 aa13.79□□□□□ -0.2
TVP23C-201ENST00000225576 U3KQ87 197 aa13.79□□□□□ -0.2
TVP23C-201ENST00000225576 A0A087X0M5 115 aa13.78□□□□□ -0.2
TVP23C-201ENST00000225576 A0A0G2JRQ6 117 aa13.78□□□□□ -0.2
TVP23C-201ENST00000225576 A0A1B0GX30 115 aa13.78□□□□□ -0.2
TVP23C-201ENST00000225576 A0A1W2PPH5 198 aa13.78□□□□□ -0.2
TVP23C-201ENST00000225576 M0R1X1 148 aa13.78□□□□□ -0.2
TVP23C-201ENST00000225576 RAMP3O60896 148 aa13.78□□□□□ -0.2
TVP23C-201ENST00000225576 PITX3O75364 302 aa13.78□□□□□ -0.2
TVP23C-201ENST00000225576 SCGB1D2O95969 90 aa13.78□□□□□ -0.2
TVP23C-201ENST00000225576 IGKV1-5P01602 117 aa13.78□□□□□ -0.2
TVP23C-201ENST00000225576 GPR6P46095 362 aaPredicted RBP13.78□□□□□ -0.2
TVP23C-201ENST00000225576 RPL39P5Q59GN2 51 aa13.78□□□□□ -0.2
TVP23C-201ENST00000225576 NCR3LG1Q68D85 454 aa13.78□□□□□ -0.2
TVP23C-201ENST00000225576 FOXRED2Q8IWF2 684 aa13.78□□□□□ -0.2
TVP23C-201ENST00000225576 OR8H1Q8NGG4 311 aa13.78□□□□□ -0.2
TVP23C-201ENST00000225576 RRNAD1Q96FB5 475 aaKnown RBP13.78□□□□□ -0.2
TVP23C-201ENST00000225576 AQP10Q96PS8 301 aa13.78□□□□□ -0.2
TVP23C-201ENST00000225576 ZNF251Q9BRH9 671 aa13.78□□□□□ -0.2
TVP23C-201ENST00000225576 LSM5Q9Y4Y9 91 aaKnown RBP13.78□□□□□ -0.2
TVP23C-201ENST00000225576 SAA2-SAA4A0A096LPE2 208 aa13.77□□□□□ -0.21
TVP23C-201ENST00000225576 A0A1W2PPE3 182 aa13.77□□□□□ -0.21
TVP23C-201ENST00000225576 E5RGE8 158 aa13.77□□□□□ -0.21
TVP23C-201ENST00000225576 F5H0A9 414 aaPredicted RBP13.77□□□□□ -0.21
TVP23C-201ENST00000225576 RBFOX2O43251 390 aaKnown RBP eCLIP13.77□□□□□ -0.214e-16■■□□□ 13.8
TVP23C-201ENST00000225576 NDUFS7O75251 213 aa13.77□□□□□ -0.21
TVP23C-201ENST00000225576 SAA2P0DJI9 122 aaPredicted RBP13.77□□□□□ -0.21
TVP23C-201ENST00000225576 NKX2-1P43699 371 aaPredicted RBP13.77□□□□□ -0.21
TVP23C-201ENST00000225576 GNG10P50151 68 aa13.77□□□□□ -0.21
TVP23C-201ENST00000225576 AKR1C2P52895 323 aa13.77□□□□□ -0.21
TVP23C-201ENST00000225576 ERVFRD-1P60508 538 aa13.77□□□□□ -0.21
TVP23C-201ENST00000225576 ID3Q02535 119 aa13.77□□□□□ -0.21
TVP23C-201ENST00000225576 FAM219AQ8IW50 185 aa13.77□□□□□ -0.21
TVP23C-201ENST00000225576 LYG1Q8N1E2 194 aa13.77□□□□□ -0.21
TVP23C-201ENST00000225576 C11orf42Q8N5U0 333 aa13.77□□□□□ -0.21
TVP23C-201ENST00000225576 LINC00311Q8N616 119 aa13.77□□□□□ -0.21
TVP23C-201ENST00000225576 RNASE11Q8TAA1 199 aaKnown RBP13.77□□□□□ -0.21
TVP23C-201ENST00000225576 ZNF596Q8TC21 504 aa13.77□□□□□ -0.21
TVP23C-201ENST00000225576 ADTRPQ96IZ2 230 aa13.77□□□□□ -0.21
TVP23C-201ENST00000225576 NSG2Q9Y328 171 aa13.77□□□□□ -0.21
TVP23C-201ENST00000225576 PRELID3BQ9Y3B1 194 aa13.77□□□□□ -0.21
TVP23C-201ENST00000225576 MMP24Q9Y5R2 645 aa13.77□□□□□ -0.21
TVP23C-201ENST00000225576 RBP4P02753 201 aa13.76□□□□□ -0.21
TVP23C-201ENST00000225576 KIR2DS2P43631 304 aa13.76□□□□□ -0.21
TVP23C-201ENST00000225576 C1orf229Q6ZS94 237 aaPredicted RBP13.76□□□□□ -0.21
TVP23C-201ENST00000225576 DDB2Q92466 427 aa13.76□□□□□ -0.21
TVP23C-201ENST00000225576 PLEKHA2Q9HB19 425 aa13.76□□□□□ -0.21
TVP23C-201ENST00000225576 PPIAL4CA0A0B4J2A2 164 aa13.75□□□□□ -0.21
TVP23C-201ENST00000225576 KANTRA0A1W2PQU2 76 aa13.75□□□□□ -0.21
TVP23C-201ENST00000225576 BCL2L11O43521 198 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms