RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 PRDM14Q9GZV8 571 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 PATZ1Q9HBE1 687 aaKnown RBP12.75□□□□□ -0.37
EFNB1-201ENST00000204961 LAMP3Q9UQV4 416 aa12.75□□□□□ -0.37
EFNB1-201ENST00000204961 TFF3Q07654 80 aa12.74□□□□□ -0.37
EFNB1-201ENST00000204961 ELOBQ15370 118 aa12.74□□□□□ -0.37
EFNB1-201ENST00000204961 OR8G1Q15617 311 aa12.74□□□□□ -0.37
EFNB1-201ENST00000204961 ZNF726P1Q15940 193 aa12.74□□□□□ -0.37
EFNB1-201ENST00000204961 SSX2Q16385 188 aa12.74□□□□□ -0.37
EFNB1-201ENST00000204961 PRR31Q5SQ13 230 aa12.74□□□□□ -0.37
EFNB1-201ENST00000204961 RIPPLY2Q5TAB7 128 aa12.74□□□□□ -0.37
EFNB1-201ENST00000204961 HAPLN4Q86UW8 402 aa12.74□□□□□ -0.37
EFNB1-201ENST00000204961 OR51G1Q8NGK1 321 aa12.74□□□□□ -0.37
EFNB1-201ENST00000204961 CLDND2Q8NHS1 167 aa12.74□□□□□ -0.37
EFNB1-201ENST00000204961 ATG101Q9BSB4 218 aa12.74□□□□□ -0.37
EFNB1-201ENST00000204961 ABI3Q9P2A4 366 aa12.74□□□□□ -0.37
EFNB1-201ENST00000204961 CA11O75493 328 aa12.74□□□□□ -0.37
EFNB1-201ENST00000204961 S1PR2O95136 353 aa12.74□□□□□ -0.37
EFNB1-201ENST00000204961 SOX8P57073 446 aa12.74□□□□□ -0.37
EFNB1-201ENST00000204961 TAS2R30P59541 319 aa12.74□□□□□ -0.37
EFNB1-201ENST00000204961 MUCL1Q96DR8 90 aa12.74□□□□□ -0.37
EFNB1-201ENST00000204961 SVEP1Q4LDE5 3571 aa12.74□□□□□ -0.37
EFNB1-201ENST00000204961 C17orf98A8MV24 154 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 TRGC1P0CF51 173 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 SLC38A11Q08AI6 406 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 ZNF324BQ6AW86 544 aaPredicted RBP12.73□□□□□ -0.37
EFNB1-201ENST00000204961 OR5A2Q8NGI9 324 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 GTF3AQ92664 365 aaKnown RBP12.73□□□□□ -0.37
EFNB1-201ENST00000204961 NINJ1Q92982 152 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 TMEM56Q96MV1 263 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 SH3BGRL2Q9UJC5 107 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 TMEM56-RWDD3S4R434 201 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 ASH1LQ9NR48 2969 aaKnown RBP12.73□□□□□ -0.37
EFNB1-201ENST00000204961 IGKV1D-33P01593 117 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 IGKV1-33P01594 117 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 FAM3BP58499 235 aaPredicted RBP12.73□□□□□ -0.37
EFNB1-201ENST00000204961 PPP1CBP62140 327 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 ASPHD1Q5U4P2 390 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 ASCL4Q6XD76 172 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 LRTM2Q8N967 370 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 FAM210BQ96KR6 192 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 PRDM13Q9H4Q3 707 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 ZZEF1O43149 2961 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 TRAV38-1A0A0B4J264 116 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 ZNF737O75373 536 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 SRPXP78539 464 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 ZNF295-AS1Q8N0V1 137 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 GNPNAT1Q96EK6 184 aaPredicted RBP12.73□□□□□ -0.37
EFNB1-201ENST00000204961 ARV1Q9H2C2 271 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 TUBA4BQ9H853 241 aa12.73□□□□□ -0.37
EFNB1-201ENST00000204961 TIMM8AO60220 97 aaPredicted RBP12.72□□□□□ -0.37
EFNB1-201ENST00000204961 SPINK4O60575 86 aa12.72□□□□□ -0.37
EFNB1-201ENST00000204961 UCP3P55916 312 aa12.72□□□□□ -0.37
EFNB1-201ENST00000204961 ZNF124Q15973 351 aa12.72□□□□□ -0.37
EFNB1-201ENST00000204961 KIAA1456Q9P272 454 aa12.72□□□□□ -0.37
EFNB1-201ENST00000204961 SPRR3Q9UBC9 169 aa12.72□□□□□ -0.37
EFNB1-201ENST00000204961 LRBAP50851 2863 aa12.72□□□□□ -0.37
EFNB1-201ENST00000204961 A0A1B0GUS0 222 aa12.72□□□□□ -0.37
EFNB1-201ENST00000204961 TSTD3H0UI37 97 aa12.72□□□□□ -0.37
EFNB1-201ENST00000204961 DDTP30046 118 aa12.72□□□□□ -0.37
EFNB1-201ENST00000204961 MISP3Q96FF7 219 aa12.72□□□□□ -0.37
EFNB1-201ENST00000204961 TRGV5A0A0B4J1U4 118 aa12.72□□□□□ -0.37
EFNB1-201ENST00000204961 CD33P20138 364 aa12.72□□□□□ -0.37
EFNB1-201ENST00000204961 FGF7P21781 194 aa12.72□□□□□ -0.37
EFNB1-201ENST00000204961 PSG7Q13046 419 aa12.72□□□□□ -0.37
EFNB1-201ENST00000204961 ZNF585BQ52M93 769 aa12.72□□□□□ -0.37
EFNB1-201ENST00000204961 HES3Q5TGS1 186 aa12.72□□□□□ -0.37
EFNB1-201ENST00000204961 VWA1Q6PCB0 445 aa12.72□□□□□ -0.37
EFNB1-201ENST00000204961 RNF115Q9Y4L5 304 aa12.72□□□□□ -0.37
EFNB1-201ENST00000204961 PAGE4O60829 102 aa12.71□□□□□ -0.37
EFNB1-201ENST00000204961 SP1P08047 785 aa12.71□□□□□ -0.37
EFNB1-201ENST00000204961 PAX6P26367 422 aa12.71□□□□□ -0.37
EFNB1-201ENST00000204961 UTF1Q5T230 341 aa12.71□□□□□ -0.37
EFNB1-201ENST00000204961 TNRC6AQ8NDV7 1962 aaKnown RBP12.71□□□□□ -0.37
EFNB1-201ENST00000204961 LFNGQ8NES3 379 aa12.71□□□□□ -0.37
EFNB1-201ENST00000204961 LYPD6BQ8NI32 183 aa12.71□□□□□ -0.37
EFNB1-201ENST00000204961 PCSK5Q92824 1860 aa12.71□□□□□ -0.37
EFNB1-201ENST00000204961 PACRGQ96M98 296 aaPredicted RBP12.71□□□□□ -0.37
EFNB1-201ENST00000204961 KCNIP1Q9NZI2 227 aa12.71□□□□□ -0.37
EFNB1-201ENST00000204961 GNG12Q9UBI6 72 aa12.71□□□□□ -0.37
EFNB1-201ENST00000204961 C1QTNF9BB2RNN3 333 aa12.71□□□□□ -0.38
EFNB1-201ENST00000204961 H0Y980 276 aa12.71□□□□□ -0.38
EFNB1-201ENST00000204961 HCFC1P51610 2035 aa12.71□□□□□ -0.38
EFNB1-201ENST00000204961 RAC2P15153 192 aa12.7□□□□□ -0.38
EFNB1-201ENST00000204961 MDH2P40926 338 aaKnown RBP12.7□□□□□ -0.38
EFNB1-201ENST00000204961 TBC1D28Q2M2D7 210 aa12.7□□□□□ -0.38
EFNB1-201ENST00000204961 SSMEM1Q8WWF3 244 aa12.7□□□□□ -0.38
EFNB1-201ENST00000204961 LURAP1Q96LR2 239 aa12.7□□□□□ -0.38
EFNB1-201ENST00000204961 FCGR3BO75015 233 aa12.7□□□□□ -0.38
EFNB1-201ENST00000204961 MYOD1P15172 320 aa12.7□□□□□ -0.38
EFNB1-201ENST00000204961 ARR3P36575 388 aa12.7□□□□□ -0.38
EFNB1-201ENST00000204961 FFAR4Q5NUL3 377 aa12.7□□□□□ -0.38
EFNB1-201ENST00000204961 Q6ZR03 302 aa12.7□□□□□ -0.38
EFNB1-201ENST00000204961 TGIF2LXQ8IUE1 241 aa12.7□□□□□ -0.38
EFNB1-201ENST00000204961 RPP25LQ8N5L8 163 aaKnown RBP12.7□□□□□ -0.38
EFNB1-201ENST00000204961 OR5D13Q8NGL4 314 aa12.7□□□□□ -0.38
EFNB1-201ENST00000204961 NAV3Q8IVL0 2385 aa12.7□□□□□ -0.38
EFNB1-201ENST00000204961 C12orf77C9JDV5 145 aa12.7□□□□□ -0.38
EFNB1-201ENST00000204961 HAND1O96004 215 aa12.7□□□□□ -0.38
EFNB1-201ENST00000204961 IFNA10P01566 189 aa12.7□□□□□ -0.38
EFNB1-201ENST00000204961 HSPB1P04792 205 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms